EPI-194_S23_L003_R1_001_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.19.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 12355495 lines in total Total number of methylation call strings processed: 24710990 Final Cytosine Methylation Report ================================= Total number of C's analysed: 286889268 Total methylated C's in CpG context: 11184609 Total methylated C's in CHG context: 1543016 Total methylated C's in CHH context: 6825308 Total C to T conversions in CpG context: 28372501 Total C to T conversions in CHG context: 59958991 Total C to T conversions in CHH context: 179004843 C methylated in CpG context: 28.3% C methylated in CHG context: 2.5% C methylated in CHH context: 3.7%