EPI-193_S22_L003_R1_001_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.19.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 10245450 lines in total Total number of methylation call strings processed: 20490900 Final Cytosine Methylation Report ================================= Total number of C's analysed: 215212165 Total methylated C's in CpG context: 7915273 Total methylated C's in CHG context: 1169495 Total methylated C's in CHH context: 5383679 Total C to T conversions in CpG context: 22018432 Total C to T conversions in CHG context: 44851717 Total C to T conversions in CHH context: 133873569 C methylated in CpG context: 26.4% C methylated in CHG context: 2.5% C methylated in CHH context: 3.9%