EPI-188_S21_L003_R1_001_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.19.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 7707760 lines in total Total number of methylation call strings processed: 15415520 Final Cytosine Methylation Report ================================= Total number of C's analysed: 159956992 Total methylated C's in CpG context: 5547539 Total methylated C's in CHG context: 918082 Total methylated C's in CHH context: 4109531 Total C to T conversions in CpG context: 16909179 Total C to T conversions in CHG context: 33025440 Total C to T conversions in CHH context: 99447221 C methylated in CpG context: 24.7% C methylated in CHG context: 2.7% C methylated in CHH context: 4.0%