EPI-182_S17_L003_R1_001_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.19.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 13762721 lines in total Total number of methylation call strings processed: 27525442 Final Cytosine Methylation Report ================================= Total number of C's analysed: 309081863 Total methylated C's in CpG context: 10856396 Total methylated C's in CHG context: 1626460 Total methylated C's in CHH context: 6108488 Total C to T conversions in CpG context: 31126499 Total C to T conversions in CHG context: 63867452 Total C to T conversions in CHH context: 195496568 C methylated in CpG context: 25.9% C methylated in CHG context: 2.5% C methylated in CHH context: 3.0%