EPI-170_S13_L002_R1_001_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.19.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 10035590 lines in total Total number of methylation call strings processed: 20071180 Final Cytosine Methylation Report ================================= Total number of C's analysed: 210743690 Total methylated C's in CpG context: 7165620 Total methylated C's in CHG context: 1092035 Total methylated C's in CHH context: 3929059 Total C to T conversions in CpG context: 22368692 Total C to T conversions in CHG context: 44317346 Total C to T conversions in CHH context: 131870938 C methylated in CpG context: 24.3% C methylated in CHG context: 2.4% C methylated in CHH context: 2.9%