EPI-136_S36_L005_R1_001_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.19.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 13455849 lines in total Total number of methylation call strings processed: 26911698 Final Cytosine Methylation Report ================================= Total number of C's analysed: 303674703 Total methylated C's in CpG context: 10129037 Total methylated C's in CHG context: 1503822 Total methylated C's in CHH context: 3235980 Total C to T conversions in CpG context: 31784709 Total C to T conversions in CHG context: 62614055 Total C to T conversions in CHH context: 194407100 C methylated in CpG context: 24.2% C methylated in CHG context: 2.3% C methylated in CHH context: 1.6%