Total number of alignments analysed in /gscratch/srlab/strigg/analyses/20181011/EPI-43_S40_L005_R1_001_val_1_bismark_bt2_pe.bam:	6188
Total number duplicated alignments removed:	15 (0.24%)
Duplicated alignments were found at:	10 different position(s)

Total count of deduplicated leftover sequences: 6173 (99.76% of total)