EPI-42_S39_L005_R1_001_val_1_bismark_bt2_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.15.0
Bismark result file: paired-end (SAM format)
Output specified: strand-specific (default)
No overlapping methylation calls specified


Processed 6127 lines in total
Total number of methylation call strings processed: 12254

Final Cytosine Methylation Report
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Total number of C's analysed:	131176

Total methylated C's in CpG context:	4643
Total methylated C's in CHG context:	875
Total methylated C's in CHH context:	8664

Total C to T conversions in CpG context:	12604
Total C to T conversions in CHG context:	25715
Total C to T conversions in CHH context:	78675

C methylated in CpG context:	26.9%
C methylated in CHG context:	3.3%
C methylated in CHH context:	9.9%