Total number of alignments analysed in /gscratch/srlab/strigg/analyses/20181011/EPI-230_S37_L004_R1_001_val_1_bismark_bt2_pe.bam:	5483
Total number duplicated alignments removed:	46 (0.84%)
Duplicated alignments were found at:	28 different position(s)

Total count of deduplicated leftover sequences: 5437 (99.16% of total)