Total number of alignments analysed in /gscratch/srlab/strigg/analyses/20181011/EPI-229_S36_L004_R1_001_val_1_bismark_bt2_pe.bam:	6101
Total number duplicated alignments removed:	40 (0.66%)
Duplicated alignments were found at:	26 different position(s)

Total count of deduplicated leftover sequences: 6061 (99.34% of total)