EPI-194_S23_L003_R1_001_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.15.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 6237 lines in total Total number of methylation call strings processed: 12474 Final Cytosine Methylation Report ================================= Total number of C's analysed: 151678 Total methylated C's in CpG context: 5329 Total methylated C's in CHG context: 770 Total methylated C's in CHH context: 7625 Total C to T conversions in CpG context: 15943 Total C to T conversions in CHG context: 30790 Total C to T conversions in CHH context: 91221 C methylated in CpG context: 25.1% C methylated in CHG context: 2.4% C methylated in CHH context: 7.7%