Total number of alignments analysed in /gscratch/srlab/strigg/analyses/20181011/EPI-181_S16_L003_R1_001_val_1_bismark_bt2_pe.bam:	6052
Total number duplicated alignments removed:	78 (1.29%)
Duplicated alignments were found at:	46 different position(s)

Total count of deduplicated leftover sequences: 5974 (98.71% of total)