Total number of alignments analysed in /gscratch/srlab/strigg/analyses/20181011/EPI-168_S11_L002_R1_001_val_1_bismark_bt2_pe.bam:	6048
Total number duplicated alignments removed:	58 (0.96%)
Duplicated alignments were found at:	33 different position(s)

Total count of deduplicated leftover sequences: 5990 (99.04% of total)