Total number of alignments analysed in /gscratch/srlab/strigg/analyses/20181011/EPI-162_S9_L002_R1_001_val_1_bismark_bt2_pe.bam:	5446
Total number duplicated alignments removed:	55 (1.01%)
Duplicated alignments were found at:	24 different position(s)

Total count of deduplicated leftover sequences: 5391 (98.99% of total)