Total number of alignments analysed in /gscratch/srlab/strigg/analyses/20181011/EPI-151_S2_L002_R1_001_val_1_bismark_bt2_pe.bam: 5988 Total number duplicated alignments removed: 28 (0.47%) Duplicated alignments were found at: 22 different position(s) Total count of deduplicated leftover sequences: 5960 (99.53% of total)