Total number of alignments analysed in /gscratch/srlab/strigg/analyses/20181011/EPI-128_S34_L005_R1_001_val_1_bismark_bt2_pe.bam:	6539
Total number duplicated alignments removed:	89 (1.36%)
Duplicated alignments were found at:	55 different position(s)

Total count of deduplicated leftover sequences: 6450 (98.64% of total)