Total number of alignments analysed in /gscratch/srlab/strigg/analyses/20181011/EPI-111_S29_L005_R1_001_val_1_bismark_bt2_pe.bam:	6413
Total number duplicated alignments removed:	68 (1.06%)
Duplicated alignments were found at:	32 different position(s)

Total count of deduplicated leftover sequences: 6345 (98.94% of total)