[2024-11-27 17:34:14,944] multiqc.config                                     [INFO   ]  Loading config settings from: multiqc_config.yml
[2024-11-27 17:34:15,944] multiqc.core.version_check                         [WARNING]  MultiQC Version v1.25.2 now available!
[2024-11-27 17:34:15,945] multiqc.core.file_search                           [INFO   ]  Search path: /gscratch/scrubbed/srlab/nxf.o09f9CvXRf
[2024-11-27 17:34:18,404] multiqc.modules.bismark.bismark                    [INFO   ]  Found 1 alignment reports
[2024-11-27 17:34:18,514] multiqc.modules.bismark.bismark                    [INFO   ]  Found 1 dedup reports
[2024-11-27 17:34:18,525] multiqc.modules.bismark.bismark                    [INFO   ]  Found 1 methextract reports
[2024-11-27 17:34:18,555] multiqc.modules.custom_content.custom_content      [WARNING]  HTML plot type found with more than one dataset in nf-core-methylseq-summary
[2024-11-27 17:34:18,556] multiqc.modules.custom_content.custom_content      [INFO   ]  nf-core-methylseq-summary: Found 1 sample (html)
[2024-11-27 17:34:18,556] multiqc.modules.custom_content.custom_content      [WARNING]  HTML plot type found with more than one dataset in nf-core-methylseq-methods-description
[2024-11-27 17:34:18,556] multiqc.modules.custom_content.custom_content      [INFO   ]  nf-core-methylseq-methods-description: Found 1 sample (html)
[2024-11-27 17:34:18,584] multiqc.modules.qualimap.qualimap                  [INFO   ]  Found 1 BamQC reports
[2024-11-27 17:34:18,595] multiqc.modules.cutadapt.cutadapt                  [INFO   ]  Found 2 reports
[2024-11-27 17:34:18,641] multiqc.modules.fastqc.fastqc                      [INFO   ]  Found 2 reports
[2024-11-27 17:34:18,724] multiqc.core.write_results                         [INFO   ]  Rendering plots. Export plots to formats png, svg, pdf is requested, so it might take a while. To disable plot export, set `export_plots: false` in config, or remove the `--export-plots` command line flag