Sample featureCounts_mqc-generalstats-featurecounts-percent_assigned featureCounts_mqc-generalstats-featurecounts-Assigned Samtools_mqc-generalstats-samtools-error_rate Samtools_mqc-generalstats-samtools-non_primary_alignments Samtools_mqc-generalstats-samtools-reads_mapped Samtools_mqc-generalstats-samtools-reads_mapped_percent Samtools_mqc-generalstats-samtools-reads_properly_paired_percent Samtools_mqc-generalstats-samtools-reads_MQ0_percent Samtools_mqc-generalstats-samtools-raw_total_sequences Samtools_mqc-generalstats-samtools-flagstat_total Samtools_mqc-generalstats-samtools-mapped_passed Samtools_mqc-generalstats-samtools-mapped_passed_pct POC-201-TP1 40.41508755487528 8393407 0.01183059 1776204.0 27588175.0 70.0245769781424 55.62813256338938 0.8315987630389743 39397846.0 41174050 29364379 71.32 POC-201-TP2 32.20786128142984 7406027 0.01177319 3028731.0 27826078.0 65.4900041766059 51.545388898588115 0.9095261870553648 42489046.0 45517777 30854809 67.79 POC-201-TP3 21.54516824111728 3538723 0.01168508 1014628.0 13587732.0 42.91918910318794 32.58750769215607 0.4824839948508592 31658874.0 32673502 14602360 44.69 POC-219-TP1 35.150527910276516 7538939 0.01182732 1808323.0 27110855.0 66.52347272100985 52.297735637922315 0.8040547268479238 40753818.0 42562141 28919178 67.95 POC-219-TP2 29.781813736103995 5819599 0.01205857 1686739.0 23225404.0 62.611017039713104 49.24531111621276 0.7584171735756935 37094756.0 38781495 24912143 64.24 POC-219-TP3 10.345599188067867 2192431 0.01132248 410700.0 7412400.0 17.69220292845055 13.43518069395043 0.1846219708212792 41896422.0 42307122 7823100 18.49 POC-219-TP4 28.484917714157465 5673126 0.01178324 1403201.0 21059888.0 55.181606620234916 42.26560426748412 0.6176468677013683 38164688.0 39567889 22463089 56.77 POC-222-TP1 39.74030152971226 8054796 0.01191533 1917018.0 27426740.0 71.70789606928658 57.00168997663817 0.8577236701258052 38247866.0 40164884 29343758 73.06 POC-222-TP2 32.19643198879864 7442911 0.01201304 2122579.0 28316481.0 64.82617649178486 50.88527573367306 0.765092022028621 43680628.0 45803207 30439060 66.46 POC-222-TP3 42.64848776484729 10156052 0.01148786 2280362.0 32242874.0 71.74926472460085 57.21659385863237 0.9159009791744515 44938264.0 47218626 34523236 73.11 POC-222-TP4 33.962305481088485 5938177 0.01190812 1534761.0 22185383.0 66.97928258018642 51.766758283444666 0.781335996396918 33122754.0 34657515 23720144 68.44 POC-255-TP1 37.699357811477924 7453652 0.01194332 1567055.0 25309044.0 67.25352432673915 52.77145740836314 0.7178621638106887 37632294.0 39199349 26876099 68.56 POC-255-TP2 33.56630663869003 7038494 0.01195559 1794272.0 26054237.0 65.45409540092567 51.95455847928814 0.7757699352936356 39805358.0 41599630 27848509 66.94 POC-255-TP3 21.58003896800994 5393347 0.01174013 1871112.0 23566462.0 49.28343012975847 37.288786079182444 0.5238149152584624 47818226.0 49689338 25437574 51.19 POC-255-TP4 37.722524844822054 8121219 0.01177821 1817474.0 28316879.0 69.28173783621617 54.22561931537205 0.8219280707792912 40872068.0 42689542 30134353 70.59 POC-259-TP1 30.93598800565549 5780123 0.01212295 1595780.0 21232155.0 59.90484645065529 47.44979380209436 0.7718871587371479 35443134.0 37038914 22827935 61.63 POC-259-TP2 32.656496669125765 7152984 0.01202449 2171743.0 25450465.0 61.76233578799146 48.14701332023009 0.8607158339913107 41207096.0 43378839 27622208 63.68 POC-259-TP3 31.797913919477622 7213214 0.01203669 1558345.0 27664799.0 63.57988104213204 49.54539767487846 0.6746778741509559 43511876.0 45070221 29223144 64.84 POC-259-TP4 38.779074729284076 7747301 0.01193032 1743744.0 26296799.0 69.43665600098944 55.2201306951656 0.8633162368102484 37871638.0 39615382 28040543 70.78 POC-40-TP1 33.953554101518286 6427036 0.01218497 1753419.0 24412664.0 68.35241943120306 54.14039146851061 0.834256498944979 35715874.0 37469293 26166083 69.83 POC-40-TP2 34.97256023683493 7743035 0.01203226 1908159.0 28948512.0 68.9283502614507 54.35596705898399 0.7166178674896143 41997976.0 43906135 30856671 70.28 POC-40-TP3 35.282913085366694 7570142 0.01184901 2201133.0 27703452.0 68.81355767169104 54.24988757712865 0.8587855468401472 40258712.0 42459845 29904585 70.43 POC-40-TP4 37.10513819923113 7443018 0.01224289 1648693.0 26754097.0 70.30324569941412 55.207923841317154 0.7835680094851489 38055280.0 39703973 28402790 71.54 POC-42-TP1 32.47930357509695 6134470 0.01229474 1710518.0 24117610.0 67.56392721579395 52.284769497612416 0.7808244882211687 35695986.0 37406504 25828128 69.05 POC-42-TP2 35.14992618123837 8012432 0.01226425 1669720.0 29858370.0 68.47006859947172 55.25393141924049 0.6861804631984707 43607916.0 45277636 31528090 69.63 POC-42-TP3 35.66462136608659 7321420 0.01213054 1758715.0 27262558.0 69.94678436875563 54.00320534546492 0.7106886053524744 38976142.0 40734857 29021273 71.24 POC-42-TP4 25.03945280262933 4169455 0.01238999 1246804.0 17267518.0 54.40663509767032 39.60336367666534 0.660261283910178 31737890.0 32984694 18514322 56.13 POC-52-TP1 9.099588773159354 1472590 0.01160345 397391.0 5509891.0 17.287555274208014 12.208675399428866 0.20827366760199106 31872008.0 32269399 5907282 18.31 POC-52-TP2 33.45301464539979 7359508 0.01198777 1858142.0 28025982.0 67.03581436009196 53.11745679169917 0.7309027696386168 41807476.0 43665618 29884124 68.44 POC-52-TP3 36.72225765605015 6895259 0.01156169 1491919.0 23570920.0 65.83990393838542 52.574857076840246 0.7442216496394617 35800356.0 37292275 25062839 67.21 POC-52-TP4 42.46347176751774 7848915 0.01157397 1670895.0 24803346.0 70.9111742935927 57.61458972126805 0.9030206086388463 34978050.0 36648945 26474241 72.24 POC-53-TP1 33.96588098288766 6994744 0.01201381 1815635.0 25481133.0 65.39119389156384 51.530132092550396 0.8193963213802452 38967224.0 40782859 27296768 66.93 POC-53-TP2 33.69058770848829 6724801 0.01204404 1721688.0 24521671.0 64.78878735755694 51.622359739587964 0.8274380523217826 37848634.0 39570322 26243359 66.32 POC-53-TP3 37.76635348472957 8210636 0.01168839 1927672.0 28081401.0 68.19317453405355 54.023701676934145 0.8125000789233475 41179196.0 43106868 30009073 69.62 POC-53-TP4 31.154960813299017 6323304 0.01181407 1181629.0 22019360.0 56.20105267988548 44.9043331760577 0.5821342533626281 39179622.0 40361251 23200989 57.48 POC-57-TP1 36.04298472566919 6972989 0.01195436 1873632.0 24973806.0 68.54169293423355 54.63919217770018 0.8739147458110996 36435934.0 38309566 26847438 70.08 POC-57-TP2 23.858434419126393 4701315 0.01228347 1629123.0 21371394.0 57.11360011938289 42.974777211358756 0.6852383240237377 37419098.0 39048221 23000517 58.9 POC-57-TP3 38.46832127016035 8822586 0.01171219 2246224.0 30594313.0 70.80034816179007 57.212635888462145 0.8569383376792618 43212094.0 45458318 32840537 72.24 POC-57-TP4 42.266121182967275 9144012 0.0118856 1776237.0 30179287.0 73.34356522112758 58.87937911285338 0.7883380101289419 41147832.0 42924069 31955524 74.45