Time Speed Read Read Mapped Mapped Mapped Mapped Unmapped Unmapped Unmapped Unmapped M/hr number length unique length MMrate multi multi+ MM short other Jul 21 19:21:25 Started 1st pass mapping Jul 21 19:21:47 7.6 46498 264 48.0% 263.5 1.4% 3.8% 0.1% 0.0% 47.9% 0.2% Jul 21 19:22:51 71.6 1709506 265 48.3% 263.8 1.4% 3.9% 0.1% 0.0% 47.6% 0.2% Jul 21 19:23:56 80.3 3369226 265 48.3% 263.8 1.4% 3.9% 0.1% 0.0% 47.6% 0.2% Jul 21 19:25:01 83.8 5028900 265 48.2% 263.8 1.4% 3.9% 0.1% 0.0% 47.6% 0.2% Jul 21 19:26:07 85.4 6688423 265 48.1% 263.8 1.4% 3.9% 0.1% 0.0% 47.7% 0.2% Jul 21 19:27:15 85.9 8348091 265 48.0% 263.7 1.4% 3.9% 0.1% 0.0% 47.8% 0.2% Jul 21 19:28:23 86.2 10009396 265 47.8% 263.6 1.5% 3.9% 0.1% 0.0% 48.1% 0.2% Jul 21 19:29:28 86.9 11665025 265 47.8% 263.6 1.5% 3.9% 0.1% 0.0% 48.0% 0.2% Jul 21 19:30:32 87.7 13321648 265 47.9% 263.6 1.5% 3.8% 0.1% 0.0% 48.0% 0.2% Jul 21 19:31:37 88.1 14978315 265 47.9% 263.6 1.5% 3.9% 0.1% 0.0% 48.0% 0.2% Jul 21 19:32:41 88.6 16635032 265 47.9% 263.6 1.5% 3.9% 0.1% 0.0% 47.9% 0.2% Jul 21 19:33:46 88.9 18291585 265 47.9% 263.6 1.5% 3.9% 0.1% 0.0% 47.9% 0.2% Jul 21 19:34:53 88.9 19949542 265 47.9% 263.5 1.5% 3.9% 0.1% 0.0% 48.0% 0.2% Jul 21 19:35:58 89.1 21607686 265 47.8% 263.5 1.5% 3.8% 0.1% 0.0% 48.0% 0.2% Jul 21 19:36:58 89.6 23219843 265 47.8% 263.4 1.5% 3.8% 0.1% 0.0% 48.1% 0.2% Jul 21 19:37:26 Finished 1st pass mapping Jul 21 19:39:19 1.9 46272 265 47.9% 263.6 1.5% 4.2% 0.1% 0.0% 47.5% 0.3% Jul 21 19:40:28 38.7 1709506 265 47.9% 264.0 1.4% 4.2% 0.1% 0.0% 47.5% 0.4% Jul 21 19:41:38 53.0 3369226 265 47.9% 264.0 1.4% 4.2% 0.1% 0.0% 47.5% 0.4% Jul 21 19:42:53 59.6 5028900 265 47.8% 264.0 1.4% 4.2% 0.1% 0.0% 47.5% 0.4% Jul 21 19:44:04 64.2 6688423 265 47.8% 264.0 1.4% 4.2% 0.1% 0.0% 47.6% 0.4% Jul 21 19:45:18 66.9 8348091 265 47.7% 263.9 1.4% 4.2% 0.1% 0.0% 47.7% 0.4% Jul 21 19:46:18 70.5 9963184 265 47.5% 263.8 1.5% 4.2% 0.1% 0.0% 47.9% 0.4% Jul 21 19:47:19 70.2 11112440 265 47.4% 263.8 1.5% 4.2% 0.1% 0.0% 47.9% 0.4% Jul 21 19:48:21 72.5 12722901 265 47.5% 263.8 1.5% 4.2% 0.1% 0.0% 47.9% 0.4% Jul 21 19:49:21 73.1 14057551 265 47.5% 263.8 1.4% 4.2% 0.1% 0.0% 47.9% 0.4% Jul 21 19:50:24 74.1 15530356 265 47.5% 263.8 1.4% 4.2% 0.1% 0.0% 47.8% 0.4% Jul 21 19:51:24 75.1 17002989 265 47.6% 263.8 1.4% 4.2% 0.1% 0.0% 47.8% 0.4% Jul 21 19:52:26 75.7 18429688 265 47.5% 263.8 1.4% 4.2% 0.1% 0.0% 47.8% 0.4% Jul 21 19:53:27 76.2 19857391 265 47.5% 263.7 1.5% 4.2% 0.1% 0.0% 47.8% 0.4% Jul 21 19:54:30 76.6 21285222 265 47.5% 263.7 1.5% 4.2% 0.1% 0.0% 47.9% 0.4% Jul 21 19:55:30 77.2 22759075 265 47.4% 263.6 1.5% 4.2% 0.1% 0.0% 47.9% 0.4% Jul 21 19:56:38 76.2 23909113 265 47.5% 263.6 1.5% 4.2% 0.1% 0.0% 47.9% 0.4% ALL DONE!