Nextflow workflow report

[marvelous_keller]

Workflow execution completed successfully!
Run times
22-Apr-2025 09:02:12 - 22-Apr-2025 20:01:11 (duration: 10h 58m 59s)
  355 succeeded  
  0 cached  
  0 ignored  
  41 failed  
Nextflow command
nextflow run nf-core/methylseq -c /gscratch/srlab/strigg/bin/uw_hyak_srlab.config --input /gscratch/scrubbed/strigg/analyses/20250422_methylseq/samplesheet.csv --outdir /gscratch/scrubbed/strigg/analyses/20250422_methylseq --fasta /gscratch/srlab/strigg/GENOMES/Pocillopora_meandrina_HIv1.assembly.fasta --em_seq -resume -with-report nf_report.html -with-trace -with-timeline nf_timeline.html --skip_trimming --nomeseq
CPU-Hours
2'878.9 (27.1% failed)
Launch directory
/mmfs1/gscratch/scrubbed/strigg/analyses/20250422_methylseq
Work directory
/mmfs1/gscratch/scrubbed/strigg/analyses/20250422_methylseq/work
Project directory
/mmfs1/home/strigg/.nextflow/assets/nf-core/methylseq
Script name
main.nf
Script ID
78f1f08d9049bd123f3defd84fae2dbc
Workflow session
96cb9e91-3b5c-4b86-9d03-5c020040b03a
Workflow repository
https://github.com/nf-core/methylseq, revision master (commit hash d16f8f81e812d86f4d297e69de3f001628dfd5b4)
Workflow profile
standard
Nextflow version
version 24.10.5, build 5935 (04-03-2025 17:55 UTC)

Resource Usage

These plots give an overview of the distribution of resource usage for each process.

CPU

Memory

Job Duration

I/O

Tasks

This table shows information about each task in the workflow. Use the search box on the right to filter rows for specific values. Clicking headers will sort the table by that value and scrolling side to side will reveal more columns.

(tasks table omitted because the dataset is too big)