Nextflow workflow report

[compassionate_euclid] (resumed run)

Run times

14-Jul-2025 12:21:25 - 14-Jul-2025 18:56:20 (duration: 6h 34m 56s)

  9 succeeded  

  2 cached  

  0 ignored  

  2 failed  

Nextflow command

nextflow run nf-core/methylseq -c /gscratch/srlab/strigg/bin/uw_hyak_srlab.config --input /gscratch/scrubbed/strigg/analyses/20250714_methylseq_test/samplesheet.csv --outdir /gscratch/scrubbed/strigg/analyses/20250714_methylseq_test --fasta /gscratch/srlab/strigg/GENOMES/Porites_evermanni_v1.fa --em_seq -resume -with-report nf_report.html -with-trace -with-timeline nf_timeline.html --skip_trimming --nomeseq

CPU-Hours

88.4 (3.3% cached, 40.8% failed)

Launch directory

/mmfs1/gscratch/scrubbed/strigg/analyses/20250714_methylseq_test

Work directory

/mmfs1/gscratch/scrubbed/strigg/analyses/20250714_methylseq_test/work

Project directory

/mmfs1/home/strigg/.nextflow/assets/nf-core/methylseq

Script name

main.nf

Script ID

5d80ec838a261829b26e2dd196e415b4

Workflow session

0cd1941b-a691-48a3-81b6-724e8121aba7

Workflow repository

https://github.com/nf-core/methylseq, revision master (commit hash 4415e90a60faba40ccefd4c847666d28688a86ee)

Workflow profile

standard

Nextflow version

version 24.10.6, build 5937 (23-04-2025 16:53 UTC)