Nextflow workflow report

[crazy_keller] (resumed run)

Workflow execution completed successfully!
Run times
19-Jun-2025 08:29:14 - 20-Jun-2025 01:03:48 (duration: 16h 34m 33s)
  307 succeeded  
  0 cached  
  0 ignored  
  35 failed  
Nextflow command
nextflow run nf-core/methylseq -c /gscratch/srlab/strigg/bin/uw_hyak_srlab.config --input /gscratch/scrubbed/strigg/analyses/20250619_methylseq/samplesheet.csv --outdir /gscratch/scrubbed/strigg/analyses/20250619_methylseq --fasta /gscratch/srlab/strigg/GENOMES/Porites_evermanni_v1.fa --em_seq -resume -with-report nf_report.html -with-trace -with-timeline nf_timeline.html --skip_trimming --nomeseq
CPU-Hours
4'021.0 (30.5% failed)
Launch directory
/mmfs1/gscratch/scrubbed/strigg/analyses/20250619_methylseq
Work directory
/mmfs1/gscratch/scrubbed/strigg/analyses/20250619_methylseq/work
Project directory
/mmfs1/home/strigg/.nextflow/assets/nf-core/methylseq
Script name
main.nf
Script ID
5d80ec838a261829b26e2dd196e415b4
Workflow session
c914940d-72dc-4b8b-adf2-b848eecbb86b
Workflow repository
https://github.com/nf-core/methylseq, revision master (commit hash 4415e90a60faba40ccefd4c847666d28688a86ee)
Workflow profile
standard
Nextflow version
version 24.10.6, build 5937 (23-04-2025 16:53 UTC)

Resource Usage

These plots give an overview of the distribution of resource usage for each process.

CPU

Memory

Job Duration

I/O

Tasks

This table shows information about each task in the workflow. Use the search box on the right to filter rows for specific values. Clicking headers will sort the table by that value and scrolling side to side will reveal more columns.

(tasks table omitted because the dataset is too big)