File	Total Reads	Aligned Reads	Unaligned Reads	Ambiguously Aligned Reads	No Genomic Sequence	Duplicate Reads (removed)	Unique Reads (remaining)	Total Cs	Methylated CpGs	Unmethylated CpGs	Methylated chgs	Unmethylated chgs	Methylated CHHs	Unmethylated CHHs
POR-236-TP1.POR-236-TP1_R1_001.fastp-trim_bismark_bt2_pe.bam	24436326	15304155	7173342	1955407	3422	3040669	12263486	549699595	7696225	79749228	705130	95839925	3070850	362638237
POR-69-TP1.POR-69-TP1_R1_001.fastp-trim_bismark_bt2_pe.bam	27676602	16823898	8705845	2143239	3620	2955191	13868707	620624359	7703217	90937555	679573	107537852	2985286	410780876
POR-73-TP2.POR-73-TP2_R1_001.fastp-trim_bismark_bt2_pe.bam	49167218	4502316	43946089	717400	1413	762478	3739838	160307804	2094597	23021403	211601	27341237	1757970	105880996
POR-69-TP2.POR-69-TP2_R1_001.fastp-trim_bismark_bt2_pe.bam	30469312	19998239	7892690	2574201	4182	3304363	16693876	737362940	8956554	108982626	836605	127885994	3647476	487053685
POR-83-TP3.POR-83-TP3_R1_001.fastp-trim_bismark_bt2_pe.bam	29875318	20311737	7010439	2548454	4688	3081788	17229949	783433914	10508314	113108265	727371	136256440	3284077	519549447
POR-74-TP3.POR-74-TP3_R1_001.fastp-trim_bismark_bt2_pe.bam	31226485	18736760	9994205	2491307	4213	4152396	14584364	625035941	8018615	91182535	612451	108824295	2795288	413602757
POR-260-TP2.POR-260-TP2_R1_001.fastp-trim_bismark_bt2_pe.bam	30929791	20441085	7902990	2581294	4422	4310292	16130793	732747645	9388646	108482656	874172	128006009	3752809	482243353
POR-83-TP1.POR-83-TP1_R1_001.fastp-trim_bismark_bt2_pe.bam	30246497	21435237	6084757	2721613	4890	3110724	18324513	823228884	11802373	117549959	850544	143480491	3907807	545637710
POR-72-TP3.POR-72-TP3_R1_001.fastp-trim_bismark_bt2_pe.bam	33295631	19152888	11533929	2604289	4525	2629380	16523508	730914217	9759135	105466117	823606	126872459	4117428	483875472
POR-72-TP2.POR-72-TP2_R1_001.fastp-trim_bismark_bt2_pe.bam	36518777	22021618	11441097	3051297	4765	4282728	17738890	752903579	9184781	110839768	813512	130860144	4007636	497197738
POR-260-TP3.POR-260-TP3_R1_001.fastp-trim_bismark_bt2_pe.bam	33371688	21062348	9639020	2665729	4591	4358096	16704252	747695454	9941574	110234027	961740	130342621	4100113	492115379
POR-83-TP4.POR-83-TP4_R1_001.fastp-trim_bismark_bt2_pe.bam	35349321	24540384	7717277	3086040	5620	3979451	20560933	933221634	13679056	132716718	987717	162156163	4320850	619361130
POR-216-TP1.POR-216-TP1_R1_001.fastp-trim_bismark_bt2_pe.bam	34731826	23125544	8509891	3091430	4961	4660395	18465149	778374099	9564766	116751577	867085	136012301	3802691	511375679
POR-74-TP1.POR-74-TP1_R1_001.fastp-trim_bismark_bt2_pe.bam	32096746	19747687	9775672	2568918	4469	4773624	14974063	656191697	8654409	95238433	752082	114264590	3352509	433929674
POR-245-TP2.POR-245-TP2_R1_001.fastp-trim_bismark_bt2_pe.bam	34113322	19366364	12165960	2576549	4449	2815448	16550916	708236182	8996466	104354327	862784	122808405	4001300	467212900
POR-72-TP1.POR-72-TP1_R1_001.fastp-trim_bismark_bt2_pe.bam	35427019	20945951	11680926	2795315	4827	3405644	17540307	798313236	11549394	113502003	936148	138759453	4411764	529154474
POR-69-TP4.POR-69-TP4_R1_001.fastp-trim_bismark_bt2_pe.bam	35747686	22132602	10696792	2913431	4861	3673146	18459456	805997804	9786540	119911744	965159	140043484	4344122	530946755
POR-236-TP2.POR-236-TP2_R1_001.fastp-trim_bismark_bt2_pe.bam	37329560	24653789	9407768	3262574	5429	3755307	20898482	904642441	11527223	132823206	881868	157581281	3848753	597980110
POR-260-TP1.POR-260-TP1_R1_001.fastp-trim_bismark_bt2_pe.bam	36459375	25925842	7164244	3363531	5758	4114994	21810848	956401613	13736001	136194422	906678	166431936	4017963	635114613
POR-262-TP1.POR-262-TP1_R1_001.fastp-trim_bismark_bt2_pe.bam	39311904	23448745	12826244	3031464	5451	3821595	19627150	865618775	12247943	122943173	861614	150419254	3947060	575199731
POR-245-TP1.POR-245-TP1_R1_001.fastp-trim_bismark_bt2_pe.bam	43016080	21825639	18299299	2885957	5185	5054216	16771423	699381329	8936356	102808664	772529	121341420	3565493	461956867
POR-245-TP4.POR-245-TP4_R1_001.fastp-trim_bismark_bt2_pe.bam	38121799	24648577	10341136	3126373	5713	4449166	20199411	911936857	12893125	130468126	891608	158968439	4160925	604554634
POR-260-TP4.POR-260-TP4_R1_001.fastp-trim_bismark_bt2_pe.bam	38097600	26399262	8432351	3259869	6118	4408872	21990390	1016825370	14590439	144247857	940826	177415546	4280638	675350064
POR-74-TP2.POR-74-TP2_R1_001.fastp-trim_bismark_bt2_pe.bam	44096555	24978608	15829921	3281754	6272	3337773	21640835	964506649	14148610	136421185	1146519	167210146	5813031	639767158
POR-74-TP4.POR-74-TP4_R1_001.fastp-trim_bismark_bt2_pe.bam	35895495	23907780	8856727	3125779	5209	4160912	19746868	870732990	11382509	127108809	1067764	151258125	4552184	575363599
POR-216-TP2.POR-216-TP2_R1_001.fastp-trim_bismark_bt2_pe.bam	45218026	33321187	7038325	4851997	6517	3793737	29527450	1098343574	13515685	163996155	1101358	192920358	5107999	721702019
POR-73-TP3.POR-73-TP3_R1_001.fastp-trim_bismark_bt2_pe.bam	36190943	23920957	9071576	3193454	4956	3678974	20241983	867085830	11828592	126142965	1052629	151129030	4639227	572293387
POR-83-TP2.POR-83-TP2_R1_001.fastp-trim_bismark_bt2_pe.bam	41847558	26357639	12125750	3358394	5775	6593545	19764094	866820097	10674217	128139659	973345	150770488	4325368	571937020
POR-216-TP4.POR-216-TP4_R1_001.fastp-trim_bismark_bt2_pe.bam	41684033	28569031	9428488	3680224	6290	4321751	24247280	1076489331	15913369	153642679	1065268	188132616	5037525	712697874
POR-73-TP4.POR-73-TP4_R1_001.fastp-trim_bismark_bt2_pe.bam	46322367	31716467	10565596	4033383	6921	4909336	26807131	1209875167	17852765	170809485	1224340	210270324	5562166	804156087
POR-72-TP4.POR-72-TP4_R1_001.fastp-trim_bismark_bt2_pe.bam	40468095	24764906	12277634	3420238	5317	6456269	18308637	779691496	10101456	114014400	964391	135762530	4408665	514440054
POR-73-TP1.POR-73-TP1_R1_001.fastp-trim_bismark_bt2_pe.bam	42702491	26051006	13380115	3265614	5756	6597395	19453611	873119551	11922251	124579964	869201	151582038	4010287	580155810
POR-216-TP3.POR-216-TP3_R1_001.fastp-trim_bismark_bt2_pe.bam	43699465	27364633	12729919	3599101	5812	4588731	22775902	975798080	12583271	142989737	1065920	170108747	4847585	644202820
POR-245-TP3.POR-245-TP3_R1_001.fastp-trim_bismark_bt2_pe.bam	41468420	29746168	7836385	3879310	6557	4464467	25281701	1106382019	15406742	158011138	1059300	192439226	4779139	734686474
POR-69-TP3.POR-69-TP3_R1_001.fastp-trim_bismark_bt2_pe.bam	44913527	32156235	8496285	4254358	6649	5281490	26874745	1159397119	14704356	169893774	1089110	202098365	4908985	766702529
POR-262-TP3.POR-262-TP3_R1_001.fastp-trim_bismark_bt2_pe.bam	46610673	30440356	12141076	4022570	6671	5704464	24735892	1074008693	14792042	155531954	1417719	187540015	6295448	708431515
POR-262-TP4.POR-262-TP4_R1_001.fastp-trim_bismark_bt2_pe.bam	47364179	30691891	12472663	4193003	6622	6694345	23997546	988529673	13685429	141473410	1037859	172052693	4998310	655281972
POR-262-TP2.POR-262-TP2_R1_001.fastp-trim_bismark_bt2_pe.bam	47015136	30700328	12431935	3875618	7255	8033491	22666837	1016740906	14598789	144032177	917782	176671314	4479241	676041603