Sample Filename File type Encoding Total Sequences Total Bases Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length median_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content POR-216-TP1_1 POR-216-TP1_1.gz Conventional base calls Sanger / Illumina 1.9 34731826.0 4.6 Gbp 0.0 15-135 20.0 82.13776140985979 133.95593612037558 135 pass pass fail pass warn pass pass warn pass pass pass POR-216-TP1_2 POR-216-TP1_2.gz Conventional base calls Sanger / Illumina 1.9 34731826.0 4.6 Gbp 0.0 15-135 20.0 82.22378687640884 133.94716983783115 135 pass pass warn pass warn warn pass warn pass pass warn POR-216-TP2_1 POR-216-TP2_1.gz Conventional base calls Sanger / Illumina 1.9 45218026.0 5.9 Gbp 0.0 15-135 20.0 83.1809443092109 132.19793298805214 135 pass pass fail pass warn pass pass warn pass pass pass POR-216-TP2_2 POR-216-TP2_2.gz Conventional base calls Sanger / Illumina 1.9 45218026.0 5.9 Gbp 0.0 15-135 20.0 82.95455377021948 132.28314521071752 135 pass pass fail pass warn warn pass warn pass pass warn POR-216-TP3_1 POR-216-TP3_1.gz Conventional base calls Sanger / Illumina 1.9 43699465.0 5.8 Gbp 0.0 15-135 20.0 80.93471515755864 133.73830822642793 135 pass pass fail pass warn pass pass warn pass pass pass POR-216-TP3_2 POR-216-TP3_2.gz Conventional base calls Sanger / Illumina 1.9 43699465.0 5.8 Gbp 0.0 15-135 20.0 80.82346552377507 133.76914836371566 135 pass pass fail pass warn pass pass warn pass pass warn POR-216-TP4_1 POR-216-TP4_1.gz Conventional base calls Sanger / Illumina 1.9 41684033.0 5.5 Gbp 0.0 15-135 20.0 83.59518185150326 133.74027220446735 135 pass pass fail pass warn warn pass warn pass pass pass POR-216-TP4_2 POR-216-TP4_2.gz Conventional base calls Sanger / Illumina 1.9 41684033.0 5.5 Gbp 0.0 15-135 20.0 83.19380575800359 133.78120366856058 135 pass pass fail pass warn warn pass warn pass pass warn POR-236-TP1_1 POR-236-TP1_1.gz Conventional base calls Sanger / Illumina 1.9 24436326.0 3.2 Gbp 0.0 15-135 20.0 79.83505885464105 134.43653256221904 135 pass pass fail pass warn pass pass warn pass pass pass POR-236-TP1_2 POR-236-TP1_2.gz Conventional base calls Sanger / Illumina 1.9 24436326.0 3.2 Gbp 0.0 15-135 20.0 79.59875108263559 134.4338379672951 135 pass pass fail pass warn pass pass warn pass pass warn POR-236-TP2_1 POR-236-TP2_1.gz Conventional base calls Sanger / Illumina 1.9 37329560.0 4.9 Gbp 0.0 15-135 20.0 82.40725112062243 133.70125355080532 135 pass pass fail pass warn pass pass warn pass pass pass POR-236-TP2_2 POR-236-TP2_2.gz Conventional base calls Sanger / Illumina 1.9 37329560.0 4.9 Gbp 0.0 15-135 20.0 82.00584137575521 133.73688227238682 135 pass pass fail pass warn pass pass warn pass pass warn POR-245-TP1_1 POR-245-TP1_1.gz Conventional base calls Sanger / Illumina 1.9 43016080.0 5.7 Gbp 0.0 15-135 19.0 78.44273977175558 134.233237187117 135 pass pass fail pass warn warn pass warn pass pass pass POR-245-TP1_2 POR-245-TP1_2.gz Conventional base calls Sanger / Illumina 1.9 43016080.0 5.7 Gbp 0.0 15-135 20.0 78.52060786873848 134.22170941657166 135 pass pass warn pass warn warn pass warn pass pass warn POR-245-TP2_1 POR-245-TP2_1.gz Conventional base calls Sanger / Illumina 1.9 34113322.0 4.5 Gbp 0.0 15-135 20.0 82.12618782556699 133.6607695814556 135 pass pass fail pass warn pass pass warn pass pass pass POR-245-TP2_2 POR-245-TP2_2.gz Conventional base calls Sanger / Illumina 1.9 34113322.0 4.5 Gbp 0.0 15-135 19.0 81.860120062164 133.687616776226 135 pass pass fail pass warn pass pass warn pass pass warn POR-245-TP3_1 POR-245-TP3_1.gz Conventional base calls Sanger / Illumina 1.9 41468420.0 5.5 Gbp 0.0 15-135 20.0 83.27307905550889 134.01310356169827 135 pass pass fail pass warn warn pass warn pass pass pass POR-245-TP3_2 POR-245-TP3_2.gz Conventional base calls Sanger / Illumina 1.9 41468420.0 5.5 Gbp 0.0 15-135 19.0 82.82742239753316 134.04085921286608 135 pass pass fail pass warn warn pass warn pass pass warn POR-245-TP4_1 POR-245-TP4_1.gz Conventional base calls Sanger / Illumina 1.9 38121799.0 5 Gbp 0.0 15-135 20.0 82.67435513633444 133.95476922534533 135 pass pass fail pass warn warn pass warn pass pass pass POR-245-TP4_2 POR-245-TP4_2.gz Conventional base calls Sanger / Illumina 1.9 38121799.0 5 Gbp 0.0 15-135 20.0 82.33761343939122 134.00056503104693 135 pass pass fail pass warn warn pass warn pass pass warn POR-260-TP1_1 POR-260-TP1_1.gz Conventional base calls Sanger / Illumina 1.9 36459375.0 4.8 Gbp 0.0 15-135 20.0 83.06245604968029 134.221587465501 135 pass pass fail pass warn pass pass warn pass pass pass POR-260-TP1_2 POR-260-TP1_2.gz Conventional base calls Sanger / Illumina 1.9 36459375.0 4.8 Gbp 0.0 15-135 19.0 82.56539435430031 134.22720015085284 135 pass pass fail pass warn warn pass warn pass pass warn POR-260-TP2_1 POR-260-TP2_1.gz Conventional base calls Sanger / Illumina 1.9 30929791.0 4.1 Gbp 0.0 15-135 20.0 77.76457280797823 134.47047762139744 135 pass pass fail pass warn pass pass warn pass pass pass POR-260-TP2_2 POR-260-TP2_2.gz Conventional base calls Sanger / Illumina 1.9 30929791.0 4.1 Gbp 0.0 15-135 20.0 77.54196702688506 134.46925035801243 135 pass pass fail pass warn pass pass warn pass pass warn POR-260-TP3_1 POR-260-TP3_1.gz Conventional base calls Sanger / Illumina 1.9 33371688.0 4.4 Gbp 0.0 15-135 20.0 78.08581192988765 134.36873663687615 135 pass pass fail pass warn pass pass warn pass pass pass POR-260-TP3_2 POR-260-TP3_2.gz Conventional base calls Sanger / Illumina 1.9 33371688.0 4.4 Gbp 0.0 15-135 20.0 77.84107747610456 134.37312072736626 135 pass pass fail pass warn pass pass warn pass pass warn POR-260-TP4_1 POR-260-TP4_1.gz Conventional base calls Sanger / Illumina 1.9 38097600.0 5.1 Gbp 0.0 15-135 20.0 83.6253325921831 134.44769116689764 135 pass pass fail pass warn pass pass warn pass pass pass POR-260-TP4_2 POR-260-TP4_2.gz Conventional base calls Sanger / Illumina 1.9 38097600.0 5.1 Gbp 0.0 15-135 20.0 83.08339185700507 134.44552537430178 135 pass pass fail pass warn warn pass warn pass pass warn POR-262-TP1_1 POR-262-TP1_1.gz Conventional base calls Sanger / Illumina 1.9 39311904.0 5.2 Gbp 0.0 15-135 20.0 82.80546384716992 134.01145656796476 135 pass pass fail pass warn warn pass warn pass pass pass POR-262-TP1_2 POR-262-TP1_2.gz Conventional base calls Sanger / Illumina 1.9 39311904.0 5.2 Gbp 0.0 15-135 19.0 82.4282969456814 134.04066585022187 135 pass pass fail pass warn warn pass warn pass pass warn POR-262-TP2_1 POR-262-TP2_1.gz Conventional base calls Sanger / Illumina 1.9 47015136.0 6.2 Gbp 0.0 15-135 20.0 83.28483840647952 134.03170597017947 135 pass pass fail pass warn warn pass warn pass pass pass POR-262-TP2_2 POR-262-TP2_2.gz Conventional base calls Sanger / Illumina 1.9 47015136.0 6.2 Gbp 0.0 15-135 20.0 83.11655468833644 134.02489906654742 135 pass pass warn pass warn warn pass warn pass pass warn POR-262-TP4_1 POR-262-TP4_1.gz Conventional base calls Sanger / Illumina 1.9 93974852.0 12.4 Gbp 0.0 15-135 20.0 77.24741314884902 133.06274002432056 135 pass pass warn pass warn warn pass warn pass pass pass POR-262-TP4_2 POR-262-TP4_2.gz Conventional base calls Sanger / Illumina 1.9 93974852.0 12.4 Gbp 0.0 15-135 20.0 76.80207106809854 133.13367211262008 135 pass pass warn pass warn warn pass warn pass pass warn POR-69-TP1_1 POR-69-TP1_1.gz Conventional base calls Sanger / Illumina 1.9 27676602.0 3.7 Gbp 0.0 15-135 20.0 81.40102732345579 134.31541977226829 135 pass pass fail pass warn warn pass warn pass pass pass POR-69-TP1_2 POR-69-TP1_2.gz Conventional base calls Sanger / Illumina 1.9 27676602.0 3.7 Gbp 0.0 15-135 19.0 81.11159303738992 134.3189358830972 135 pass pass fail pass warn warn pass warn pass pass warn POR-69-TP2_1 POR-69-TP2_1.gz Conventional base calls Sanger / Illumina 1.9 30469312.0 4 Gbp 0.0 15-135 20.0 81.704418888226 134.23914745761243 135 pass pass fail pass warn pass pass warn pass pass pass POR-69-TP2_2 POR-69-TP2_2.gz Conventional base calls Sanger / Illumina 1.9 30469312.0 4 Gbp 0.0 15-135 19.0 81.76799387386605 134.24326620830823 135 pass pass fail pass warn warn pass warn pass pass warn POR-69-TP3_1 POR-69-TP3_1.gz Conventional base calls Sanger / Illumina 1.9 44913527.0 5.9 Gbp 0.0 15-135 20.0 81.63950488511374 133.47027612638837 135 pass pass fail pass warn pass pass warn pass pass pass POR-69-TP3_2 POR-69-TP3_2.gz Conventional base calls Sanger / Illumina 1.9 44913527.0 5.9 Gbp 0.0 15-135 20.0 81.19061643186352 133.50300513028068 135 pass pass fail pass warn pass pass warn pass pass warn POR-69-TP4_1 POR-69-TP4_1.gz Conventional base calls Sanger / Illumina 1.9 35747686.0 4.7 Gbp 0.0 15-135 20.0 79.11078500677033 134.26385900894397 135 pass pass fail pass warn pass pass warn pass pass pass POR-69-TP4_2 POR-69-TP4_2.gz Conventional base calls Sanger / Illumina 1.9 35747686.0 4.7 Gbp 0.0 15-135 20.0 79.01259310419549 134.27868382865398 135 pass pass fail pass warn pass pass warn pass pass warn POR-72-TP1_1 POR-72-TP1_1.gz Conventional base calls Sanger / Illumina 1.9 35427019.0 4.7 Gbp 0.0 15-135 20.0 82.6806880520045 134.1199248375936 135 pass pass fail pass warn warn pass warn pass pass pass POR-72-TP1_2 POR-72-TP1_2.gz Conventional base calls Sanger / Illumina 1.9 35427019.0 4.7 Gbp 0.0 15-135 20.0 82.33015394416124 134.13646584263836 135 pass pass fail pass fail warn pass warn pass pass warn POR-72-TP2_1 POR-72-TP2_1.gz Conventional base calls Sanger / Illumina 1.9 36518777.0 4.8 Gbp 0.0 15-135 19.0 82.16643395821981 134.0527600910622 135 pass pass fail pass warn warn pass warn pass pass pass POR-72-TP2_2 POR-72-TP2_2.gz Conventional base calls Sanger / Illumina 1.9 36518777.0 4.8 Gbp 0.0 15-135 19.0 82.35872585424366 134.04114773613585 135 pass pass warn pass warn warn pass warn pass pass warn POR-72-TP3_1 POR-72-TP3_1.gz Conventional base calls Sanger / Illumina 1.9 33295631.0 4.4 Gbp 0.0 15-135 20.0 82.96032592323364 133.85317073582416 135 pass pass fail pass warn warn pass warn pass pass pass POR-72-TP3_2 POR-72-TP3_2.gz Conventional base calls Sanger / Illumina 1.9 33295631.0 4.4 Gbp 0.0 15-135 19.0 82.69377833678807 133.88292058498607 135 pass pass fail pass warn warn pass warn pass pass warn POR-72-TP4_1 POR-72-TP4_1.gz Conventional base calls Sanger / Illumina 1.9 40468095.0 5.4 Gbp 0.0 15-135 20.0 79.49655894658041 134.27036166392315 135 pass pass fail pass warn warn pass warn pass pass pass POR-72-TP4_2 POR-72-TP4_2.gz Conventional base calls Sanger / Illumina 1.9 40468095.0 5.4 Gbp 0.0 15-135 20.0 79.55775299114825 134.25250059336867 135 pass pass warn pass warn warn pass warn pass pass warn POR-73-TP1_1 POR-73-TP1_1.gz Conventional base calls Sanger / Illumina 1.9 42702491.0 5.7 Gbp 0.0 15-135 19.0 81.72804308687851 134.43144930350783 135 pass pass fail pass warn warn pass warn pass pass pass POR-73-TP1_2 POR-73-TP1_2.gz Conventional base calls Sanger / Illumina 1.9 42702491.0 5.7 Gbp 0.0 15-135 19.0 81.75258830502088 134.4027677448606 135 pass pass warn pass warn warn pass warn pass pass warn POR-73-TP2_1 POR-73-TP2_1.gz Conventional base calls Sanger / Illumina 1.9 49167218.0 6.5 Gbp 0.0 15-135 19.0 84.89916025820075 133.95384215149207 135 pass pass fail pass warn pass pass warn pass pass pass POR-73-TP2_2 POR-73-TP2_2.gz Conventional base calls Sanger / Illumina 1.9 49167218.0 6.5 Gbp 0.0 15-135 19.0 84.8225516287899 133.96691719470482 135 pass pass warn pass fail pass pass warn pass pass warn POR-73-TP3_1 POR-73-TP3_1.gz Conventional base calls Sanger / Illumina 1.9 82513310.0 11 Gbp 0.0 15-135 20.0 80.23225870182009 133.98754867548035 135 pass pass fail pass warn pass pass warn pass pass pass POR-73-TP3_2 POR-73-TP3_2.gz Conventional base calls Sanger / Illumina 1.9 82513310.0 11 Gbp 0.0 15-135 19.0 79.92116929584766 134.02110690990338 135 pass pass fail pass warn warn pass warn pass pass warn POR-74-TP1_1 POR-74-TP1_1.gz Conventional base calls Sanger / Illumina 1.9 32096746.0 4.2 Gbp 0.0 15-135 20.0 81.0090708302732 134.37466512960535 135 pass pass fail pass warn warn pass warn pass pass pass POR-74-TP1_2 POR-74-TP1_2.gz Conventional base calls Sanger / Illumina 1.9 32096746.0 4.2 Gbp 0.0 15-135 20.0 81.07379557159011 134.34446848599544 135 pass pass warn pass warn warn pass warn pass pass warn POR-74-TP2_1 POR-74-TP2_1.gz Conventional base calls Sanger / Illumina 1.9 44096555.0 5.8 Gbp 0.0 15-135 20.0 83.13567962252706 133.8902256310045 135 pass pass fail pass warn warn pass warn pass pass pass POR-74-TP2_2 POR-74-TP2_2.gz Conventional base calls Sanger / Illumina 1.9 44096555.0 5.8 Gbp 0.0 15-135 20.0 82.81140628320775 133.91519373792352 135 pass pass fail pass warn warn pass warn pass pass warn POR-74-TP3_1 POR-74-TP3_1.gz Conventional base calls Sanger / Illumina 1.9 31226485.0 4.1 Gbp 0.0 15-135 19.0 83.43967777963252 134.1586847831256 135 pass pass fail pass warn warn pass warn pass pass pass POR-74-TP3_2 POR-74-TP3_2.gz Conventional base calls Sanger / Illumina 1.9 31226485.0 4.1 Gbp 0.0 15-135 20.0 83.44795586987907 134.1631638815576 135 pass pass warn pass warn warn pass warn pass pass warn POR-74-TP4_1 POR-74-TP4_1.gz Conventional base calls Sanger / Illumina 1.9 35895495.0 4.8 Gbp 0.0 15-135 20.0 80.28003280301377 134.2111171192931 135 pass pass fail pass warn pass pass warn pass pass pass POR-74-TP4_2 POR-74-TP4_2.gz Conventional base calls Sanger / Illumina 1.9 35895495.0 4.8 Gbp 0.0 15-135 19.0 80.01536155981901 134.2222035522842 135 pass pass fail pass warn pass pass warn pass pass warn POR-83-TP1_1 POR-83-TP1_1.gz Conventional base calls Sanger / Illumina 1.9 30246497.0 4 Gbp 0.0 15-135 20.0 84.90745153491333 133.82988568891136 135 pass pass fail pass warn pass pass warn pass pass pass POR-83-TP1_2 POR-83-TP1_2.gz Conventional base calls Sanger / Illumina 1.9 30246497.0 4 Gbp 0.0 15-135 20.0 84.43522755637343 133.8842140298098 135 pass pass fail pass warn warn pass warn pass pass warn POR-83-TP2_1 POR-83-TP2_1.gz Conventional base calls Sanger / Illumina 1.9 41847558.0 5.6 Gbp 0.0 15-135 19.0 79.59599801149194 134.43240455034436 135 pass pass fail pass warn warn pass warn pass pass pass POR-83-TP2_2 POR-83-TP2_2.gz Conventional base calls Sanger / Illumina 1.9 41847558.0 5.6 Gbp 0.0 15-135 20.0 79.76187636966185 134.40223445057416 135 pass pass warn pass warn warn pass warn pass pass warn POR-83-TP3_1 POR-83-TP3_1.gz Conventional base calls Sanger / Illumina 1.9 29875318.0 3.9 Gbp 0.0 15-135 20.0 83.09929901421707 134.33520821435272 135 pass pass fail pass warn pass pass warn pass pass pass POR-83-TP3_2 POR-83-TP3_2.gz Conventional base calls Sanger / Illumina 1.9 29875318.0 3.9 Gbp 0.0 15-135 19.0 82.81355209331073 134.33058667358787 135 pass pass fail pass warn warn pass warn pass pass warn POR-83-TP4_1 POR-83-TP4_1.gz Conventional base calls Sanger / Illumina 1.9 35349321.0 4.7 Gbp 0.0 15-135 20.0 82.52386337159633 134.20730654204078 135 pass pass fail pass warn pass pass warn pass pass pass POR-83-TP4_2 POR-83-TP4_2.gz Conventional base calls Sanger / Illumina 1.9 35349321.0 4.7 Gbp 0.0 15-135 19.0 82.21620678998815 134.2176221432938 135 pass pass fail pass warn warn pass warn pass pass warn