Sample	aligned_reads	dedup_reads	dedup_reads_percent	dup_reads	dup_reads_percent
POR-216-TP1.POR-216-TP1_R1_001	23125594.0	18464870.0	79.85	4660724.0	20.15
POR-216-TP2.POR-216-TP2_R1_001	33321187.0	29527450.0	88.61	3793737.0	11.39
POR-216-TP3.POR-216-TP3_R1_001	27364633.0	22775902.0	83.23	4588731.0	16.77
POR-216-TP4.POR-216-TP4_R1_001	28568047.0	24246264.0	84.87	4321783.0	15.13
POR-236-TP1.POR-236-TP1_R1_001	15304155.0	12263486.0	80.13	3040669.0	19.87
POR-236-TP2.POR-236-TP2_R1_001	24654475.0	20899234.0	84.77	3755241.0	15.23
POR-245-TP1.POR-245-TP1_R1_001	21227292.0	16483999.0	77.65	4743293.0	22.35
POR-245-TP2.POR-245-TP2_R1_001	21459261.0	17945155.0	83.62	3514106.0	16.38
POR-245-TP3.POR-245-TP3_R1_001	29746168.0	25281701.0	84.99	4464467.0	15.01
POR-245-TP4.POR-245-TP4_R1_001	24647799.0	20199615.0	81.95	4448184.0	18.05
POR-260-TP1.POR-260-TP1_R1_001	22908496.0	19740092.0	86.17	3168404.0	13.83
POR-260-TP2.POR-260-TP2_R1_001	20441085.0	16130793.0	78.91	4310292.0	21.09
POR-260-TP3.POR-260-TP3_R1_001	21062348.0	16704252.0	79.31	4358096.0	20.69
POR-260-TP4.POR-260-TP4_R1_001	26398972.0	21990383.0	83.3	4408589.0	16.7
POR-262-TP1.POR-262-TP1_R1_001	22097394.0	18723384.0	84.73	3374010.0	15.27
POR-262-TP2.POR-262-TP2_R1_001	30700328.0	22666837.0	73.83	8033491.0	26.17
POR-262-TP4.POR-262-TP4_1	61132247.0	48688591.0	79.64	12443656.0	20.36
POR-69-TP1.POR-69-TP1_R1_001	16823898.0	13868707.0	82.43	2955191.0	17.57
POR-69-TP2.POR-69-TP2_R1_001	19998239.0	16693876.0	83.48	3304363.0	16.52
POR-69-TP3.POR-69-TP3_R1_001	32156235.0	26874745.0	83.58	5281490.0	16.42
POR-69-TP4.POR-69-TP4_R1_001	23710140.0	19459765.0	82.07	4250375.0	17.93
POR-72-TP1.POR-72-TP1_R1_001	22573659.0	18566120.0	82.25	4007539.0	17.75
POR-72-TP2.POR-72-TP2_R1_001	24171086.0	18870226.0	78.07	5300860.0	21.93
POR-72-TP3.POR-72-TP3_R1_001	21692640.0	18261115.0	84.18	3431525.0	15.82
POR-72-TP4.POR-72-TP4_R1_001	24764906.0	18308637.0	73.93	6456269.0	26.07
POR-73-TP1.POR-73-TP1_R1_001	23307533.0	18150373.0	77.87	5157160.0	22.13
POR-73-TP2.POR-73-TP2_R1_001	3403583.0	2853149.0	83.83	550434.0	16.17
POR-73-TP3.POR-73-TP3_1	55637424.0	47018049.0	84.51	8619375.0	15.49
POR-74-TP1.POR-74-TP1_R1_001	19747687.0	14974063.0	75.83	4773624.0	24.17
POR-74-TP2.POR-74-TP2_R1_001	28959926.0	24302854.0	83.92	4657072.0	16.08
POR-74-TP3.POR-74-TP3_R1_001	18736578.0	14584464.0	77.84	4152114.0	22.16
POR-74-TP4.POR-74-TP4_R1_001	23907780.0	19746868.0	82.6	4160912.0	17.4
POR-83-TP1.POR-83-TP1_R1_001	21435237.0	18324513.0	85.49	3110724.0	14.51
POR-83-TP2.POR-83-TP2_R1_001	26357280.0	19764270.0	74.99	6593010.0	25.01
POR-83-TP3.POR-83-TP3_R1_001	20311737.0	17229949.0	84.83	3081788.0	15.17
POR-83-TP4.POR-83-TP4_R1_001	24540380.0	20560930.0	83.78	3979450.0	16.22