File	Total Reads	Aligned Reads	Unaligned Reads	Ambiguously Aligned Reads	No Genomic Sequence	Duplicate Reads (removed)	Unique Reads (remaining)	Total Cs	Methylated CpGs	Unmethylated CpGs	Methylated chgs	Unmethylated chgs	Methylated CHHs	Unmethylated CHHs
POR-216-TP2.POR-216-TP2_R1_001.fastp-trim_bismark_bt2_pe.bam	45218026	33321187	7038325	4851997	6517	3793737	29527450	1670008420	20476022	250434251	1518036	294168389	7404354	1096007368
POR-216-TP1.POR-216-TP1_R1_001.fastp-trim_bismark_bt2_pe.bam	34731826	23125594	8509437	3091835	4960	4660724	18464870	1177910884	14359609	177376506	1258519	206322651	5731055	772862544
POR-236-TP1.POR-236-TP1_R1_001.fastp-trim_bismark_bt2_pe.bam	24436326	15304155	7173342	1955407	3422	3040669	12263486	777078591	10819411	112880073	954007	135654010	4285066	512486024
POR-236-TP2.POR-236-TP2_R1_001.fastp-trim_bismark_bt2_pe.bam	37329560	24654107	9406957	3263059	5437	3754999	20899108	1247856722	15699968	183920727	1148175	217702280	5290771	824094801
POR-245-TP1.POR-245-TP1_R1_001.fastp-trim_bismark_bt2_pe.bam	43016080	24561581	15225790	3223401	5308	6550233	18011348	1235545582	15792218	181272231	1295441	215047214	6065188	816073290
POR-245-TP2.POR-245-TP2_R1_001.fastp-trim_bismark_bt2_pe.bam	34113322	21459090	9811908	2837633	4691	3514001	17945089	1084116719	13521868	160165709	1053915	188732555	4734609	715908063
POR-260-TP3.POR-260-TP3_R1_001.fastp-trim_bismark_bt2_pe.bam	33371688	21062348	9639020	2665729	4591	4358096	16704252	747694464	9941642	110233742	962186	130342001	4100740	492114153
POR-262-TP1.POR-262-TP1_R1_001.fastp-trim_bismark_bt2_pe.bam	39311904	23448957	12825639	3031857	5451	3821751	19627206	865638692	12247438	122940086	861610	150414272	3968737	575206549
POR-69-TP1.POR-69-TP1_R1_001.fastp-trim_bismark_bt2_pe.bam	27676602	16823898	8705845	2143239	3620	2955191	13868707	620624359	7703217	90937555	679573	107537852	2985286	410780876
POR-69-TP2.POR-69-TP2_R1_001.fastp-trim_bismark_bt2_pe.bam	30469312	19998239	7892690	2574201	4182	3304363	16693876	1011784807	12175063	150018819	1093172	175751539	4902580	667843634
POR-72-TP3.POR-72-TP3_R1_001.fastp-trim_bismark_bt2_pe.bam	33295631	21692640	8655781	2942531	4679	3431525	18261115	808739831	10706062	116553924	747918	140731428	3452285	536548214
POR-72-TP4.POR-72-TP4_R1_001.fastp-trim_bismark_bt2_pe.bam	40468095	24764906	12277634	3420238	5317	6456269	18308637	1254716565	16081680	183893795	1484497	218906593	6959996	827390004
POR-73-TP2.POR-73-TP2_R1_001.fastp-trim_bismark_bt2_pe.bam	49167218	3102848	45566374	497117	879	409525	2693323	116381943	1580305	16478128	240857	19720068	2146447	76216138
POR-74-TP1.POR-74-TP1_R1_001.fastp-trim_bismark_bt2_pe.bam	32096746	19747687	9775672	2568918	4469	4773624	14974063	999122949	13125367	145108394	1110558	174226726	5117168	660434736
POR-74-TP2.POR-74-TP2_R1_001.fastp-trim_bismark_bt2_pe.bam	44096555	28959926	11353887	3776005	6737	4657072	24302854	1465463550	21185135	207008609	1315456	254907795	6678757	974367798
POR-74-TP3.POR-74-TP3_R1_001.fastp-trim_bismark_bt2_pe.bam	31226485	18736760	9994205	2491307	4213	4152396	14584364	946421559	12079140	138368388	893168	165103562	4224060	625753241
POR-74-TP4.POR-74-TP4_R1_001.fastp-trim_bismark_bt2_pe.bam	35895495	23907780	8856727	3125779	5209	4160912	19746868	1211650374	15638766	177409866	1410056	210852398	6164189	800175099
POR-83-TP3.POR-83-TP3_R1_001.fastp-trim_bismark_bt2_pe.bam	29875318	20311737	7010439	2548454	4688	3081788	17229949	1031175400	13708842	149261531	913637	179551715	4297662	683442013
POR-260-TP2.POR-260-TP2_R1_001.fastp-trim_bismark_bt2_pe.bam	30929791	20441085	7902990	2581294	4422	4310292	16130793	1044998327	13254190	155051658	1186797	182869793	5211876	687424013
POR-83-TP1.POR-83-TP1_R1_001.fastp-trim_bismark_bt2_pe.bam	30246497	21435237	6084757	2721613	4890	3110724	18324513	1086439332	15449030	155357011	1072420	189463205	5215667	719881999
POR-72-TP1.POR-72-TP1_R1_001.fastp-trim_bismark_bt2_pe.bam	35427019	22573963	9844369	3003660	5027	4007710	18566253	1144181453	16337568	162867031	1146794	199406112	5344337	759079611