Total number of alignments analysed in /Volumes/web/metacarcinus/Cvirginica/Bismark_attempt6/zr2096_9_s1_R1_bismark_bt2_pe.bam:	14107
Total number duplicated alignments removed:	9 (0.06%)
Duplicated alignments were found at:	9 different position(s)

Total count of deduplicated leftover sequences: 14098 (99.94% of total)