Total number of alignments analysed in /Volumes/web/metacarcinus/Cvirginica/Bismark_attempt6/zr2096_10_s1_R1_bismark_bt2_pe.bam:	16486
Total number duplicated alignments removed:	3 (0.02%)
Duplicated alignments were found at:	3 different position(s)

Total count of deduplicated leftover sequences: 16483 (99.98% of total)