Total number of alignments analysed in /Volumes/web/metacarcinus/Cvirginica/Bismark_attempt5/zr2096_9_s1_R1_bismark_bt2_pe.bam:	49112
Total number duplicated alignments removed:	36 (0.07%)
Duplicated alignments were found at:	36 different position(s)

Total count of deduplicated leftover sequences: 49076 (99.93% of total)