Total number of alignments analysed in /Volumes/web/metacarcinus/Cvirginica/Bismark_attempt5/zr2096_8_s1_R1_bismark_bt2_pe.bam:	45836
Total number duplicated alignments removed:	13 (0.03%)
Duplicated alignments were found at:	12 different position(s)

Total count of deduplicated leftover sequences: 45823 (99.97% of total)