Total number of alignments analysed in /Volumes/web/metacarcinus/Cvirginica/Bismark_attempt5/zr2096_10_s1_R1_bismark_bt2_pe.bam: 52694 Total number duplicated alignments removed: 20 (0.04%) Duplicated alignments were found at: 19 different position(s) Total count of deduplicated leftover sequences: 52674 (99.96% of total)