Total number of alignments analysed in /Volumes/web/metacarcinus/Cvirginica/Bismark_attempt4/zr2096_4_s1_R1_bismark_bt2_pe.bam:	78339
Total number duplicated alignments removed:	20 (0.03%)
Duplicated alignments were found at:	19 different position(s)

Total count of deduplicated leftover sequences: 78319 (99.97% of total)