Total number of alignments analysed in /Volumes/web/metacarcinus/Cvirginica/Bismark_attempt4/zr2096_2_s1_R1_bismark_bt2_pe.bam:	79272
Total number duplicated alignments removed:	207 (0.26%)
Duplicated alignments were found at:	166 different position(s)

Total count of deduplicated leftover sequences: 79065 (99.74% of total)