Total number of alignments analysed in /Volumes/web/metacarcinus/Cvirginica/Bismark_attempt4/zr2096_1_s1_R1_bismark_bt2_pe.bam:	84845
Total number duplicated alignments removed:	645 (0.76%)
Duplicated alignments were found at:	537 different position(s)

Total count of deduplicated leftover sequences: 84200 (99.24% of total)