Mapping efficiency:	35.5% 
Mapping efficiency:	13.7% 
Mapping efficiency:	31.3% 
Mapping efficiency:	34.9% 
Mapping efficiency:	35.9% 
Mapping efficiency:	33.5% 
Mapping efficiency:	35.4% 
Mapping efficiency:	33.1% 
Mapping efficiency:	30.3% 
Mapping efficiency:	32.2% 

Total number of alignments analysed in /Volumes/web/metacarcinus/Cvirginica/Bismark_attempt3/zr2096_10_s1_R1_bismark_bt2_pe.bam:	35458
Total number duplicated alignments removed:	15 (0.04%)
Duplicated alignments were found at:	14 different position(s)

Total count of deduplicated leftover sequences: 35443 (99.96% of total)


Total number of alignments analysed in /Volumes/web/metacarcinus/Cvirginica/Bismark_attempt3/zr2096_1_s1_R1_bismark_bt2_pe.bam:	13744
Total number duplicated alignments removed:	1 (0.01%)
Duplicated alignments were found at:	1 different position(s)

Total count of deduplicated leftover sequences: 13743 (99.99% of total)


Total number of alignments analysed in /Volumes/web/metacarcinus/Cvirginica/Bismark_attempt3/zr2096_2_s1_R1_bismark_bt2_pe.bam:	31325
Total number duplicated alignments removed:	9 (0.03%)
Duplicated alignments were found at:	9 different position(s)

Total count of deduplicated leftover sequences: 31316 (99.97% of total)


Total number of alignments analysed in /Volumes/web/metacarcinus/Cvirginica/Bismark_attempt3/zr2096_3_s1_R1_bismark_bt2_pe.bam:	34892
Total number duplicated alignments removed:	13 (0.04%)
Duplicated alignments were found at:	13 different position(s)

Total count of deduplicated leftover sequences: 34879 (99.96% of total)


Total number of alignments analysed in /Volumes/web/metacarcinus/Cvirginica/Bismark_attempt3/zr2096_4_s1_R1_bismark_bt2_pe.bam:	35879
Total number duplicated alignments removed:	9 (0.03%)
Duplicated alignments were found at:	8 different position(s)

Total count of deduplicated leftover sequences: 35870 (99.97% of total)


Total number of alignments analysed in /Volumes/web/metacarcinus/Cvirginica/Bismark_attempt3/zr2096_5_s1_R1_bismark_bt2_pe.bam:	33466
Total number duplicated alignments removed:	17 (0.05%)
Duplicated alignments were found at:	17 different position(s)

Total count of deduplicated leftover sequences: 33449 (99.95% of total)


Total number of alignments analysed in /Volumes/web/metacarcinus/Cvirginica/Bismark_attempt3/zr2096_6_s1_R1_bismark_bt2_pe.bam:	35383
Total number duplicated alignments removed:	9 (0.03%)
Duplicated alignments were found at:	9 different position(s)

Total count of deduplicated leftover sequences: 35374 (99.97% of total)


Total number of alignments analysed in /Volumes/web/metacarcinus/Cvirginica/Bismark_attempt3/zr2096_7_s1_R1_bismark_bt2_pe.bam:	33107
Total number duplicated alignments removed:	10 (0.03%)
Duplicated alignments were found at:	10 different position(s)

Total count of deduplicated leftover sequences: 33097 (99.97% of total)


Total number of alignments analysed in /Volumes/web/metacarcinus/Cvirginica/Bismark_attempt3/zr2096_8_s1_R1_bismark_bt2_pe.bam:	30256
Total number duplicated alignments removed:	10 (0.03%)
Duplicated alignments were found at:	10 different position(s)

Total count of deduplicated leftover sequences: 30246 (99.97% of total)


Total number of alignments analysed in /Volumes/web/metacarcinus/Cvirginica/Bismark_attempt3/zr2096_9_s1_R1_bismark_bt2_pe.bam:	32194
Total number duplicated alignments removed:	20 (0.06%)
Duplicated alignments were found at:	20 different position(s)

Total count of deduplicated leftover sequences: 32174 (99.94% of total)