Total number of alignments analysed in /Volumes/web/metacarcinus/Cvirginica/Bismark_attempt3/zr2096_6_s1_R1_bismark_bt2_pe.bam: 35383 Total number duplicated alignments removed: 9 (0.03%) Duplicated alignments were found at: 9 different position(s) Total count of deduplicated leftover sequences: 35374 (99.97% of total)