Total number of alignments analysed in /Volumes/web/metacarcinus/Cvirginica/Bismark_attempt2/zr2096_8_s1_R1_bismark_bt2_pe.bam:	48884
Total number duplicated alignments removed:	27 (0.06%)
Duplicated alignments were found at:	24 different position(s)

Total count of deduplicated leftover sequences: 48857 (99.94% of total)