Total number of alignments analysed in /Volumes/web/metacarcinus/Cvirginica/Bismark_attempt2/zr2096_6_s1_R1_bismark_bt2_pe.bam: 56844 Total number duplicated alignments removed: 12 (0.02%) Duplicated alignments were found at: 12 different position(s) Total count of deduplicated leftover sequences: 56832 (99.98% of total)