Total number of alignments analysed in /Volumes/web/metacarcinus/Cvirginica/Bismark_attempt2/zr2096_3_s1_R1_bismark_bt2_pe.bam:	55171
Total number duplicated alignments removed:	16 (0.03%)
Duplicated alignments were found at:	16 different position(s)

Total count of deduplicated leftover sequences: 55155 (99.97% of total)