Total number of alignments analysed in /Volumes/web/metacarcinus/Cvirginica/Bismark_attempt2/zr2096_10_s1_R1_bismark_bt2_pe.bam:	55304
Total number duplicated alignments removed:	22 (0.04%)
Duplicated alignments were found at:	21 different position(s)

Total count of deduplicated leftover sequences: 55282 (99.96% of total)