Genome: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/F-Ptua/data/Pocillopora_meandrina_HIv1.assembly.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/F-Ptua/output/04-Ptua-sRNA-discovery-ShortStack/ShortStack_out/merged_alignments.bam
Location: Pocillopora_meandrina_HIv1___Sc0000002:3841944-3842042 minus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/F-Ptua/output/04-Ptua-sRNA-discovery-ShortStack/ShortStack_out/strucVis/Cluster_958.ps.pdf
Locus Name: Cluster_958
AGUUACAUCCUUCGCAGCCCCUCUUUCGGGUGUCACACAACGUCGUCAAGGAGCGUUGUGUAACUCCCUAAGGAAGGCUUGCAAAGGAGGGCAGAAAAC
.(((...(((((.((((((..(((((.(((.((.((((((((((......)).)))))))).)).))).))))).))).))).))))).)))....... (-39.50)
....................CUCUUUCGGGUGUCACACAAu.......................................................... len:21 al:2
....................CUCUUUCGGGUGUCACACAACGUu....................................................... len:24 al:3
....................CUCUUUuGGGUGUCACACAACG......................................................... len:22 al:1
....................CUCUUUCGGGUGUCACgCAACG......................................................... len:22 al:2
....................CUCUUUCGGGUGUCACACAACa......................................................... len:22 al:54
....................CUCUUUCGGGUGUCACACAAC.......................................................... len:21 al:41
....................CUCUUUCGGGUGUCACACAACaU........................................................ len:23 al:1
....................CUCUUUCGaGUGUCACACAACG......................................................... len:22 al:1
....................CUCUUUCGGGUGUCACACAACGUCGU..................................................... len:26 al:1
....................CUCUUUCGGGUGUCACAC............................................................. len:18 al:1
....................uUCUUUCGGGUGUCACACAACG......................................................... len:22 al:1
....................CUCUUUCGGGaGUCACACAACG......................................................... len:22 al:1
....................CUCUUUCGGGUGUCACACgACG......................................................... len:22 al:2
....................CUCUUUCGGGUGUCACACAA........................................................... len:20 al:1
....................CUCUUUCGGGUGUCcCACAACG......................................................... len:22 al:1
....................CUCUUUCGGGUGUCACACAACGU........................................................ len:23 al:7
....................CcCUUUCGGGUGUCACACAACG......................................................... len:22 al:3
....................CUCUUUCGGGUGUCACACAgCG......................................................... len:22 al:3
....................CUCUUUCGGGUGUCACACAACGa........................................................ len:23 al:1
....................CUCUUcCGGGUGUCACACAACG......................................................... len:22 al:1
....................CUCUUUCGGGUGUCACgCAAC.......................................................... len:21 al:1
....................CUCUUUCGGGUGUCACACAAaG......................................................... len:22 al:1
....................CUCUUUCGGGUGcCACACAACG......................................................... len:22 al:3
....................CUCUUUCGGGcGUCACACAACG......................................................... len:22 al:1
....................CcCUUUCGGGUGUCACACAAC.......................................................... len:21 al:2
....................CUCUUUCGGGUGUCACACAACu......................................................... len:22 al:4
....................CUCUUUCGGGUGUCACACAACc......................................................... len:22 al:2
....................CUCUUUCGGGUGUCgCACAACG......................................................... len:22 al:3
....................CUCUUUCGGGUGUCACACAACGc........................................................ len:23 al:2
....................CUCUUUCGGGUGUCACACAACGUC....................................................... len:24 al:2
....................CUCUUUCGGGUGUCACACAACG......................................................... len:22 al:526
....................CUCUUUCGGGUGcCACACAAC.......................................................... len:21 al:2
....................CUCUUUCGGGUGUCACACA............................................................ len:19 al:3
.....................UCUUUCGGGUGUCACACAACG......................................................... len:21 al:23
.....................UCUUUCGGGUGUCACACAACGa........................................................ len:22 al:1
.....................UCUUUCGGGUGUCACACAACGUCu...................................................... len:24 al:1
.....................UCUUUCGGGUGUCACACAACa......................................................... len:21 al:3
.....................UCUUUCGGGUGUCACACAACGaC....................................................... len:23 al:2
.....................UCUUUCGGGUGUCACACAAC.......................................................... len:20 al:1
.....................UCUUUCGGGUGUCACACAACGc........................................................ len:22 al:2
.....................UCUUUCGGGUGUCACACAACGU........................................................ len:22 al:55
.....................UCUUUCGGGUGUCACACAACaU........................................................ len:22 al:1
.....................UCUUUCGGGUGUCACACAACGUC....................................................... len:23 al:59
.....................UCUUUCGGGUGUCACACAA........................................................... len:19 al:1
.....................UCUUUCGGGUGUCACACu............................................................ len:18 al:1
.....................UCUUUCGGGUGUCACcCAACGU........................................................ len:22 al:1
.....................UCUUUCGGGUGUCgCACAACGU........................................................ len:22 al:1
.....................UCUUUCGGGUGUCACACAACGUu....................................................... len:23 al:52
.....................UCUUUCGGGcGUCACACAACG......................................................... len:21 al:1
.....................UCUUUCGGGUGUCACACAACGUa....................................................... len:23 al:3
......................CUUUCGGGUGUCACACAACu......................................................... len:20 al:1
......................CUUUCGGGUGUCACACAACa......................................................... len:20 al:2
.......................UUUCGGGUGUCACACAACa......................................................... len:19 al:3
.......................UUUCGGGUGUCACACAAC.......................................................... len:18 al:2
.......................UUUCGGGUGUCACACA............................................................ len:16 al:1
.......................UUUCGGGUGUCACACAACG......................................................... len:19 al:14
.......................UUUCGGGUGUCACACAACGUu....................................................... len:21 al:2
.......................UUUCGGGUGUCACACAACGUC....................................................... len:21 al:46
.......................UUUCGGGUGUCACACAACGU........................................................ len:20 al:8
.......................UUUCGGGUGUCACACAgCG......................................................... len:19 al:1
.......................cUUCGGGUGUCACACAACG......................................................... len:19 al:1
........................UUCGGGUGUCACACAACG......................................................... len:18 al:2
.....................................CAACGUCGUCAAGGAGCGUUGUGUAACU.................................. len:28 al:1
........................................CGUCGUCAAGGAGCGUUGUGUAACUCCC............................... len:28 al:1
...................................................AGaGUUGUGUAACUCCCUAAGGAAGG...................... len:26 al:3
....................................................GuGUUGUGUAACUCCCUAAGGAAGG...................... len:25 al:1
....................................................GgGUUGUGUAACUCCCUAAGGAAGG...................... len:25 al:1
....................................................GaGUUGUGUAACUCCCUAAGGAAGG...................... len:25 al:1
.....................................................CGUUGUGUAACUCCCUAAGGA......................... len:21 al:5
.....................................................CGUUGUGUAACUCCCUAAGGAAG....................... len:23 al:7
.....................................................gGUUGUGUAACUCCCUAAGGAAGG...................... len:24 al:1
.....................................................CGUUGUGUAACUCCCUAAGGAgG....................... len:23 al:3
.....................................................CGUUGUGUAACUCCCUAAGGAAGu...................... len:24 al:2
.....................................................CGUUGUGUAACUCCCUAAGa.......................... len:20 al:1
.....................................................CGUUGUGUAACUCCCUAAGG.......................... len:20 al:5
......................................................uUUGUGUAACUCCCUAAGGAAGG...................... len:23 al:1
......................................................GUUGUGUAACUCCCUAAG........................... len:18 al:2
......................................................GUUGUGUAACUCCCUAAGGAAGGu..................... len:24 al:2
......................................................aUUGUGUAACUCCCUAAGGAAGG...................... len:23 al:10
......................................................cUUGUGUAACUCCCUA............................. len:16 al:2
......................................................GUUGUGUAACUCCCUAAGGAgG....................... len:22 al:4
......................................................GUUGUGUAACUCCCUAAGGAAG....................... len:22 al:2
......................................................cUUGUGUAACUCCCUAAGGAAGG...................... len:23 al:211
......................................................GUUGUGUAACUCCCUAAGGA......................... len:20 al:3
......................................................GUUGUGUAACUCCCUAAGGAAGu...................... len:23 al:1
......................................................GUUGUGUAACUCCCUAA............................ len:17 al:1
......................................................GUUGUGUAACUCCCUAAGGAAGG...................... len:23 al:14
......................................................GUUGUGUAACUCCCUAAGGAAGc...................... len:23 al:1
......................................................cUUGUGUAACUCCCUAA............................ len:17 al:1
.......................................................UUGUGUAAuUCCCUAAGGAAGG...................... len:22 al:228
.......................................................UUGUGUAcCUCCCUAAGGAAGG...................... len:22 al:496
.......................................................UUGUGUAACUCCgUAAGGA......................... len:19 al:1
.......................................................UUGUGUAACUCCCUAAGGgAGG...................... len:22 al:1955
.......................................................UUGUGUAcCUCCCUAAGGA......................... len:19 al:3
.......................................................UUGUGUAACUCCCUAAGGAAGGa..................... len:23 al:35
.......................................................UUGUGUAACUCCCUAAGGg......................... len:19 al:32
.......................................................UUGUGUAACUuCCUAAGGAA........................ len:20 al:1
.......................................................UUGUGUAACUCCCcAAGGAA........................ len:20 al:10
.......................................................UUGUGUAACUCCCUAAGGAAGGuU.................... len:24 al:10
.......................................................UUGUGUAACUCCCUAAGGAAaG...................... len:22 al:384
.......................................................UUGUGUAACaCCCUAAGGAAGG...................... len:22 al:156
.......................................................UUGUGUAACUCCCUAAGGu......................... len:19 al:121
.......................................................UUGcGUAACUCCCUA............................. len:15 al:10
.......................................................UUGUGUAACUCCCUgAGGA......................... len:19 al:11
.......................................................UUGcGUAACUCCCUAAGGAAGG...................... len:22 al:2531
.......................................................UUGUuUAACUCCCUAAGGAAGG...................... len:22 al:38
.......................................................UUGUGUAACUCCCUAAGuAAGG...................... len:22 al:31
.......................................................UUGUGUcACUCCCUAAGGA......................... len:19 al:4
.......................................................UUGgGUAACUCCCUAAGGAA........................ len:20 al:3
.......................................................UUGUGUgACUCCCUAAGGAAG....................... len:21 al:11
.......................................................UUGUaUAACUCCCUAAGGAA........................ len:20 al:6
.......................................................UUGcGUAACUCCCUAAGG.......................... len:18 al:7
.......................................................UUaUGUAACUCCCUAAGGAAG....................... len:21 al:1
.......................................................UUGUGUAACUCCCUAAGGAAu....................... len:21 al:34
.......................................................gUGUGUAACUCCCUAAGGAA........................ len:20 al:1
.......................................................UUGUGUAACUCCuUAAGGAA........................ len:20 al:3
.......................................................UUGUGUAACcCCCUAAGGA......................... len:19 al:13
.......................................................UUGUGUgACUCCCUAAGGA......................... len:19 al:50
.......................................................UUGUGUgACUCCCUAAGGAAGG...................... len:22 al:7309
.......................................................UUGUGUAACUCCCUcAGGAA........................ len:20 al:1
.......................................................UUGUGUAACUCCCUAgGG.......................... len:18 al:7
.......................................................UUaUGUAACUCCCUAAGGAA........................ len:20 al:3
.......................................................UUGUGUAACUCCCUAAGGAAGGC..................... len:23 al:30
.......................................................UUGUGgAACUCCCUA............................. len:15 al:1
.......................................................UUGUGUuACUCCCUAAGGAAGG...................... len:22 al:111
.......................................................UUGUGUAACUCCaUAAGGAA........................ len:20 al:3
.......................................................UUGUGUAAuUCCCUAAGGAAG....................... len:21 al:1
.......................................................UUGUGUAgCUCCCUAAGGA......................... len:19 al:7
.......................................................UUGUGUAACUCCCUAAGGAcGG...................... len:22 al:114
.......................................................UUGaGUAACUCCCUAAGGAA........................ len:20 al:4
.......................................................UUGUGUAACUCCCUAcGGAA........................ len:20 al:2
.......................................................UUGUGUAACUCCCcAAGGAAGG...................... len:22 al:1052
.......................................................UUGUGUAACUCCCUAAGGc......................... len:19 al:4
.......................................................UUGUGUAACUCCCUAAGG.......................... len:18 al:1077
.......................................................UaGUGUAACUCCCUAAGGAA........................ len:20 al:3
.......................................................UUGUGUAACUCCCgAAGGAAGG...................... len:22 al:51
.......................................................UUGUGcAACUCCCUAAGG.......................... len:18 al:2
.......................................................UUGUGUgACUCCCUAAG........................... len:17 al:1
.......................................................UUGaGUAACUCCCUA............................. len:15 al:2
.......................................................UUGUGUAACgCCCUAAGGAAGG...................... len:22 al:36
.......................................................UUGUGUAACUCCCcAAGGA......................... len:19 al:7
.......................................................cUGUGUAACUCCCUAAGG.......................... len:18 al:4
.......................................................UUGUGUAACUCCCgAAGG.......................... len:18 al:1
.......................................................UUGUGUAAuUCCCUAAGGA......................... len:19 al:1
.......................................................UUGUGUAACUCCCUAAGaAA........................ len:20 al:4
.......................................................UUGUGUcACUCCCUAAGGAA........................ len:20 al:7
.......................................................UUGUGUAgCUCCCUAAGGAAG....................... len:21 al:1
.......................................................UUGUGUAACUCCCUg............................. len:15 al:7
.......................................................UUGUGUAACUCCCUAAGu.......................... len:18 al:46
.......................................................UUGUGUAACUCCCUAAGGAc........................ len:20 al:1
.......................................................UUGUGUAACUCCCUAAGGAA........................ len:20 al:5417
.......................................................UUGUGUAACUCCuUAAGGAAGG...................... len:22 al:274
.......................................................UUGUGUAACUCuCUAAGGAAG....................... len:21 al:1
.......................................................UUGaGUAACUCCCUAAGG.......................... len:18 al:1
.......................................................UUGUGcAACUCCCUA............................. len:15 al:5
.......................................................cUGUGUAACUCCCUA............................. len:15 al:12
.......................................................UUGUGUAACUCCCUAAGGAg........................ len:20 al:82
.......................................................UUGUGcAACUCCCUAAGGAAGG...................... len:22 al:1242
.......................................................UUGUGUAACUCCCUA............................. len:15 al:1961
.......................................................UcGUGUAACUCCCUAAGGAAG....................... len:21 al:2
.......................................................UUGUGUAACUCCCUAAGGAAGc...................... len:22 al:1707
.......................................................UUGUGUAACUCCCUAAGGcAGG...................... len:22 al:87
.......................................................UUGUGUAACUCCCaAAGGAAGG...................... len:22 al:89
.......................................................UUGUGUAACUCCCUAAGGAuG....................... len:21 al:1
.......................................................UUGUGUAACUCCCUAgGGA......................... len:19 al:19
.......................................................UUGUGUAgCUCCCUAAGGAAGG...................... len:22 al:2152
.......................................................UUGUcUAACUCCCUAAGGAAGG...................... len:22 al:14
.......................................................aUGUGUAACUCCCUAAGGA......................... len:19 al:9
.......................................................UUGUGUAACUCCCUuAGGAAG....................... len:21 al:2
.......................................................UUGUGUAACUCCCUgAGGAAG....................... len:21 al:2
.......................................................UUGUGUAuCUCCCUAA............................ len:16 al:1
.......................................................UUGUGUAACUCCCUAAGcAAGG...................... len:22 al:6
.......................................................UUGUGUAACUCCCUuAGGAAGG...................... len:22 al:32
.......................................................UUGUGUAACUCCCUAAGGgA........................ len:20 al:42
.......................................................cUGUGUAACUCCCUAAGGAAGG...................... len:22 al:2703
.......................................................UUGUGUuACUCCCUAAGGAA........................ len:20 al:1
.......................................................UcGUGUAACUCCCUAAGG.......................... len:18 al:4
.......................................................UUGUGUAACUCCCUAgGGAAGG...................... len:22 al:1547
.......................................................UUGUGUAACUCuCUAAGGA......................... len:19 al:7
.......................................................UUGUGUAACcCCCUAA............................ len:16 al:2
.......................................................UUGUGUAACUCCCUAAGGAAGu...................... len:22 al:12682
.......................................................UUGUGUAACUCCCUAAGGAAuG...................... len:22 al:63
.......................................................UUGUGUAACUCCCUAAGGgAG....................... len:21 al:2
.......................................................UUGUGUAACUCCCUAAcGAA........................ len:20 al:1
.......................................................UUGUGUAACUCCCUc............................. len:15 al:4
.......................................................aUGUGUAACUCCCUAAGGAAGG...................... len:22 al:912
.......................................................UUGUGcAACUCCCUAAGGA......................... len:19 al:8
.......................................................UUGUGUgACUCCCUAAGGAA........................ len:20 al:52
.......................................................UcGUGUAACUCCCUAAGGA......................... len:19 al:15
.......................................................UUGUGUAACUCCCUAAGc.......................... len:18 al:1
.......................................................UUGUGUAcCUCCCUAA............................ len:16 al:2
.......................................................UUGUGUAACUCCCcAAGG.......................... len:18 al:2
.......................................................UUGUGUAACUCCCUAAGGA......................... len:19 al:3784
.......................................................UUGUGUAACUCaCUAAGGA......................... len:19 al:1
.......................................................UUGUGUAACUCCCUAAGGAAGGuUU................... len:25 al:3
.......................................................UUGUGUAACUCCCUAAGcA......................... len:19 al:2
.......................................................UUGUuUAACUCCCUAAGG.......................... len:18 al:1
.......................................................UUGUGaAACUCCCUAAGGAAGG...................... len:22 al:75
.......................................................UUGUGUAACcCCCUAAGGAA........................ len:20 al:14
.......................................................UaGUGUAACUCCCUA............................. len:15 al:2
.......................................................UUGUGUAACUCCCUgAGGAA........................ len:20 al:14
.......................................................UUGUGUgACUCCCUAA............................ len:16 al:10
.......................................................UUGUGUAACUCCaUAAGGAAGG...................... len:22 al:431
.......................................................UUGUGUAACUCCCUAAGaAAGG...................... len:22 al:146
.......................................................UUGUGUAgCUCCCUAA............................ len:16 al:3
.......................................................UUGUGUAACUCCCUAAGGAu........................ len:20 al:96
.......................................................UUGUGUAACUCCCcA............................. len:15 al:8
.......................................................UUGUGUAACUCCCUAAGGAAGG...................... len:22 al:648054
.......................................................UUGUGUAACUCCCUAAaGAAGG...................... len:22 al:156
.......................................................UgGUGUAACUCCCUAAGGAA........................ len:20 al:1
.......................................................UUGgGUAACUCCCUAAGGAAGG...................... len:22 al:63
.......................................................UUGUGUAACUCCCUAAGaA......................... len:19 al:32
.......................................................UUGUGUAACcCCCUAAGG.......................... len:18 al:2
.......................................................UUGUGUAACUCCaUAAGG.......................... len:18 al:1
.......................................................UUGUGUAACUuCCUAAGGAAGG...................... len:22 al:177
.......................................................UUGUGUAACUCuCUAAGG.......................... len:18 al:1
.......................................................UUGUGUAACUCaCUAAGGAAGG...................... len:22 al:146
.......................................................UUGUGUAACUCCCUAAGGAgGG...................... len:22 al:6675
.......................................................UUGUaUAACUCCCUAAGG.......................... len:18 al:1
.......................................................UUGUGUAACUCgCUAAGGAA........................ len:20 al:1
.......................................................UaGUGUAACUCCCUAAGGAAGG...................... len:22 al:367
.......................................................UUGUGUAACUCCCUAuGGAA........................ len:20 al:2
.......................................................gUGUGUAACUCCCUAAGGAAGG...................... len:22 al:67
.......................................................UUGUGUAACUCCCUAAGGcA........................ len:20 al:1
.......................................................UUGUGUAACUCCCUAAGGAAGGu..................... len:23 al:256
.......................................................UUGUGUAACUCCCUcAGGA......................... len:19 al:2
.......................................................UUGUGUAACUCCCUgAGGAAGG...................... len:22 al:1139
.......................................................UUGaGUAACUCCCUAAGGAAGG...................... len:22 al:199
.......................................................UUGcGUAACUCCCUAAGGAAG....................... len:21 al:4
.......................................................UUcUGUAACUCCCUAAGGAAGG...................... len:22 al:5
.......................................................UUGUGUAACcCCCUA............................. len:15 al:6
.......................................................UcGUGUAACUCCCUAAGGAA........................ len:20 al:11
.......................................................UUGUGUAACUCaCUAAGGAA........................ len:20 al:1
.......................................................UcGUGUAACUCCCUAAGGAAGG...................... len:22 al:2031
.......................................................UUGUGgAACUCCCUAAGGAAGG...................... len:22 al:34
.......................................................UUGcGUAACUCCCUAAGGA......................... len:19 al:16
.......................................................UUGUGUAACUCCCUcA............................ len:16 al:1
.......................................................UUGUGUAACUCCCUAAGGAAGa...................... len:22 al:45225
.......................................................UUGUGUAACUCuCUAAGGAA........................ len:20 al:3
.......................................................UUGUGUAACUCuCUAAGGAAGG...................... len:22 al:376
.......................................................UUGUGUAcCUCCCUA............................. len:15 al:4
.......................................................UUGUGUAACUCCCUAAGGAAcG...................... len:22 al:317
.......................................................UUGUGUAACUCCCUAAGGAAGGg..................... len:23 al:5
.......................................................UUGUGUAACUCCCUAAG........................... len:17 al:17
.......................................................UUGUGUAgCUCCCUAAGG.......................... len:18 al:6
.......................................................UUaUGUAACUCCCUAAGGA......................... len:19 al:4
.......................................................UUaUGUAACUCCCUAAGGAAGG...................... len:22 al:416
.......................................................UUGUGUgACUCCCUAAGG.......................... len:18 al:36
.......................................................UUGUGUAACUCCCUAAGGAcG....................... len:21 al:1
.......................................................UUGUGUAACUCgCUAAGGAAGG...................... len:22 al:93
.......................................................UUGUGUcACUCCCUA............................. len:15 al:5
.......................................................UUGUGUAACUCCCUAAaGAA........................ len:20 al:4
.......................................................UUGUGUAACUCCgUAAGGAAGG...................... len:22 al:3
.......................................................UUGcGUAACUCCCUAAGGAA........................ len:20 al:19
.......................................................aUGUGUAACUCCCUAAGGAA........................ len:20 al:5
.......................................................UUGUGUcACUCCCUAAGG.......................... len:18 al:2
.......................................................UUGUGUAACUCCCUAgGGAA........................ len:20 al:16
.......................................................UUGUGcAACUCCCUAAGGAAG....................... len:21 al:2
.......................................................aUGUGUAACUCCCUAAGGAAG....................... len:21 al:2
.......................................................UUGUGUgACUCCCUA............................. len:15 al:42
.......................................................UUGUGUAACUCCCUAAGGAAa....................... len:21 al:41
.......................................................cUGUGUAACUCCCUAAGGAA........................ len:20 al:25
.......................................................UUGUGUAuCUCCCUAAGGAAGG...................... len:22 al:172
.......................................................UUGUGUAgCUCCCUA............................. len:15 al:7
.......................................................UUGUGUAAaUCCCUAAGGAAGG...................... len:22 al:25
.......................................................UUGUGUAACUCCCUAAGGuAGG...................... len:22 al:116
.......................................................UaGUGUAACUCCCUAAGGA......................... len:19 al:3
.......................................................UUGUGUAcCUCCCUAAGG.......................... len:18 al:1
.......................................................UgGUGUAACUCCCUAAGGAAGG...................... len:22 al:58
.......................................................UUGUGUAACUCCCcAAGGAAG....................... len:21 al:2
.......................................................cUGUGUAACUCCCUAAGGA......................... len:19 al:24
.......................................................UUGUGUAACUCCCUAg............................ len:16 al:2
.......................................................UUGUGUAACUgCCUAAGGAAGG...................... len:22 al:1
.......................................................UUGUGUAACUCCCUAcGGA......................... len:19 al:2
.......................................................UUGcGUAACUCCCUAA............................ len:16 al:2
.......................................................UUGUGUcACUCCCUAAGGAAGG...................... len:22 al:514
.......................................................UUGUGUAACUCCCUAAaGAAGGC..................... len:23 al:1
.......................................................UUGUGUAACcCCCUAAGGAAG....................... len:21 al:1
.......................................................UUGUGUAACUCCCUAAaGA......................... len:19 al:1
.......................................................UUGUGUAACUCCCUAgGGAAG....................... len:21 al:7
.......................................................UUGUGUAACUCCCUAAGa.......................... len:18 al:88
.......................................................UUGUGUAACUCCCUAAuG.......................... len:18 al:1
.......................................................UUGUGUAACUCCCUAAGGAAG....................... len:21 al:773
.......................................................UUGUGcAACUCCCUAAGGAA........................ len:20 al:6
.......................................................UUGUaUAACUCCCUAAGGA......................... len:19 al:4
.......................................................UgGUGUAACUCCCUAAGGA......................... len:19 al:2
.......................................................UUGUGUAACUCCCaAAGGAA........................ len:20 al:1
.......................................................UUGUGUcACUCCCUAAGGAAG....................... len:21 al:1
.......................................................UUGUGUAACUCCuUAAGG.......................... len:18 al:2
.......................................................UUuUGUAACUCCCUAAGGAAGG...................... len:22 al:34
.......................................................UUGUGUAACUCCCUAu............................ len:16 al:14
.......................................................UUGUGUAACcCCCUAAGGAAGG...................... len:22 al:1834
.......................................................UUGUGUAcCUCCCUAAGGAA........................ len:20 al:2
.......................................................aUGUGUAACUCCCUAAGG.......................... len:18 al:2
.......................................................UUGUGUAACUCCCUAuGGA......................... len:19 al:1
.......................................................UUGUGUAACUCCCUAAGGAuGG...................... len:22 al:165
.......................................................UUGUGUAACUCCCUAAGGAAc....................... len:21 al:1
.......................................................UUGUGUAACUaCCUAAGGAAGG...................... len:22 al:30
.......................................................UUGUGcAACUCCCUAAGGAAGGC..................... len:23 al:1
.......................................................UUGUGUAACUCCCUAAGGAgG....................... len:21 al:122
.......................................................UUGUGUAACUCCCUAuGGAAGG...................... len:22 al:177
.......................................................UUGUGUAACUCaCUAA............................ len:16 al:1
.......................................................UUGUGUAACUCCCUAAGGuA........................ len:20 al:3
.......................................................UUGUGUAACUCCCUAAGGAAGaC..................... len:23 al:1
.......................................................UUGUGUAACUCCCUAAGuA......................... len:19 al:1
.......................................................UUGUGUAACUCCCUAAcGAAGG...................... len:22 al:13
.......................................................UUGUGUAAuUCCCUAAGGAA........................ len:20 al:2
.......................................................UUGUGUAACUCCCUgA............................ len:16 al:3
.......................................................UUGUcUAACUCCCUAAGGAA........................ len:20 al:1
.......................................................UUGUGUAACUCCCUcAGGAAGG...................... len:22 al:284
.......................................................UUGUGUAgCUCCCUAAGGAA........................ len:20 al:19
.......................................................UUaUGUAACUCCCUA............................. len:15 al:1
.......................................................aUGUGUAACUCCCUA............................. len:15 al:1
.......................................................UUGUGUAACUCCaUAAGGA......................... len:19 al:1
.......................................................cUGUGUAACUCCCUAA............................ len:16 al:2
.......................................................cUGUGUAACUCCCUAAGGAAG....................... len:21 al:1
.......................................................UUGUGUAACUCCCUAAuGAAGG...................... len:22 al:81
.......................................................UUGUGUAuCUCCCUAAGGA......................... len:19 al:3
.......................................................UUGUaUAACUCCCUAAGGAAGG...................... len:22 al:413
.......................................................UUGUGUAACUCCCUAcGGAAGG...................... len:22 al:181
.......................................................UUGUGUAACUCCCUAA............................ len:16 al:544
........................................................UGUGUAACUCCCUcAGGAAGG...................... len:21 al:1
........................................................UGcGUAACUCCCUAAGGAAGG...................... len:21 al:2
........................................................UGUGUAACUCCCUAAGGAAGu...................... len:21 al:3
........................................................UGUGUAACUCCCUAAGGAAGG...................... len:21 al:280
........................................................UGUGUAACUCCCUgAGGAAGG...................... len:21 al:1
........................................................UGUGUAACUCCCUAAGGAgGG...................... len:21 al:2
........................................................UGUGUAACUCCCUAAGGAAGa...................... len:21 al:19
........................................................UGUGUgACUCCCUAAGGAAGG...................... len:21 al:2
........................................................UGUGUAcCUCCCUAAGGAAGG...................... len:21 al:1
........................................................UGUGUAACUCCCUAAGGAA........................ len:19 al:2
........................................................UGUGUAACUCCCUAAGG.......................... len:17 al:1
........................................................cGUGUAACUCCCUAAGGAAGG...................... len:21 al:1
........................................................UGUGUAACUCCCUAAGGu......................... len:18 al:1
........................................................UGUGUAgCUCCCUAAGGAAGG...................... len:21 al:1
........................................................UGUGUAACUCCCUAAGGAAGc...................... len:21 al:1
........................................................UuUGUAACUCCCUAAGGAAGG...................... len:21 al:2
.........................................................GUGUAACUCCCUAAGGAgGG...................... len:20 al:1
.........................................................GUGUAACUCCCUAAGGAAGu...................... len:20 al:1
.........................................................GUGUAACUCCCUAAGGAA........................ len:18 al:1
.........................................................uUGUAACUCCCUAAGGAAGG...................... len:20 al:9
.........................................................GUGUAACUCCCUAAGGAAGa...................... len:20 al:1
.........................................................GUGUAACUCCCUAAGGAAGG...................... len:20 al:28
..........................................................UGUAgCUCCCUAAGGAAGG...................... len:19 al:1
..........................................................UGUAACUCCCUAAGGAAGG...................... len:19 al:2
..........................................................UGUgACUCCCUAAGGAAGG...................... len:19 al:1
...........................................................GUAACUCCCUAAGGAAGG...................... len:18 al:1