Genome: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/F-Ptua/data/Pocillopora_meandrina_HIv1.assembly.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/F-Ptua/output/04-Ptua-sRNA-discovery-ShortStack/ShortStack_out/merged_alignments.bam
Location: Pocillopora_meandrina_HIv1___Sc0000001:19145766-19145858 plus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/F-Ptua/output/04-Ptua-sRNA-discovery-ShortStack/ShortStack_out/strucVis/Cluster_789.ps.pdf
Locus Name: Cluster_789
GGAAAAAGUUGUGGUCUCUCUCCGCUCUUAAAAUCUCCUAGCUAUUGAAUAGCUAGGAGGUUUUAAAAGAGGAGAGACAACACAAGCAACCUA
((......(((((...(((((((.((.((((((((((((((((((...)))))))))))))))))).)).)))))))...)))))....)).. (-44.80)
GGAAAAAGUcGUGGUCUCUCUC....................................................................... len:22 al:1
GGAAAAAGUUGUGGUCUCUCUC....................................................................... len:22 al:1
.GAAAAAGUUGUGGUCUCUCUC....................................................................... len:21 al:2
..AAAAAGUUGUGGUCUCUCUC....................................................................... len:20 al:4
..AAAAAaUUGUGGUCUCUCUC....................................................................... len:20 al:1
...AAAAGUUGUGGUCUCUCUC....................................................................... len:19 al:1
...AAAAGUUGcGGUCUCUCUC....................................................................... len:19 al:1
.......GUUGUGGUCUCUCUC....................................................................... len:15 al:1
.........UGUGGUCUCUCUCCGCUCUUAAAAUCU......................................................... len:27 al:1
....................aCCGCUCUUAAAAUCUCCUAGCUA................................................. len:24 al:1
....................UCCGCcCUUAAAAUCUCCU...................................................... len:19 al:1
....................aCCGCUCUUAAAAUCUCCUAGC................................................... len:22 al:1
....................UCCGCUCcUAAAAUCUCCUAGCUA................................................. len:24 al:1
....................UCCGCUCUUAAAAUCUCCUAGCUuUU............................................... len:26 al:2
.....................CCGCUCUUAAAAUCUCCUAGCUAU................................................ len:24 al:3
.....................CCGCUCUUAAAAUCUCCc...................................................... len:18 al:1
.....................CCGCUCUUAgAAUCUCCUAGCUAU................................................ len:24 al:1
.....................CCGCUCUUAAAAUCUCCUAGCUA................................................. len:23 al:1
......................CGCUCUUAAAAUCUCCUAuC................................................... len:20 al:1
......................CGCUCUUAAAAUCUCuUAGCUA................................................. len:22 al:2
......................CGCUCUUAAAAUCUCCUgGCU.................................................. len:21 al:4
......................CGCUCUUAAAAUCUCCUc..................................................... len:18 al:1
......................CGCUCUUAAAAUCUCCUgGCUA................................................. len:22 al:7
......................CGCUCUUAAAAUCaCCUAGC................................................... len:20 al:1
......................CGCUCUUgAAAUCUCCUAGC................................................... len:20 al:1
......................CGCUCUUAAAAUCcCCUAGCUAU................................................ len:23 al:5
......................CaCUCUUAAAAUCUCCUAGCUA................................................. len:22 al:6
......................CGCUCUUAAAAUCUCCUA..................................................... len:18 al:299
......................CGCUCUUgAAAUCUCCUAGCUAU................................................ len:23 al:1
......................CGCUCUUAAAAcCUCCUAG.................................................... len:19 al:1
......................CGCUCUUAAAAUCUCCUAGCUAg................................................ len:23 al:34
......................aGCUCUUAAAAUCUCCUAGC................................................... len:20 al:3
......................CGCUCUUAAAAUCUCCUAG.................................................... len:19 al:314
......................CGCUCUUAAAgUCUCCUAGCUAU................................................ len:23 al:5
......................CGCUCUUAAAAUCUCCUAGCcA................................................. len:22 al:7
......................CGCUCUUAcAAUCUCCUAGCUAU................................................ len:23 al:3
......................CGCUuUUAAAAUCUCCUAGCUAUU............................................... len:24 al:1
......................CGCUCUUAAAAUCUCCUu..................................................... len:18 al:6
......................CGCUCUUAAAAUCUCCUg..................................................... len:18 al:1
......................CGCUCUUAAAcUCUCCUAGC................................................... len:20 al:1
......................uGCUCUUAAAAUCUCCUAGC................................................... len:20 al:3
......................CGCUCUcAAAAUCUCCUAGC................................................... len:20 al:3
......................CGCUCUUAAAAUCUCCUAGCUAUUu.............................................. len:25 al:27
......................CGCUCUUAAAAUCUCCUAcCUA................................................. len:22 al:1
......................CGCUCUUAAAAUCUCCUgGCUAUU............................................... len:24 al:9
......................CGCcCUUAAAAUCUCCUAGCU.................................................. len:21 al:1
......................CaCUCUUAAAAUCUCCUAGCUAU................................................ len:23 al:11
......................CGCUCUUAAAAUCUCCUAGCUAUUGu............................................. len:26 al:1
......................CGCUCUUAAgAUCUCCUA..................................................... len:18 al:1
......................CaCUCUUAAAAUCUCCUAGC................................................... len:20 al:10
......................CGCUCUUAAgAUCUCCUAGCUAUU............................................... len:24 al:3
......................CGCUCUUAAAAcCUCCUAGC................................................... len:20 al:11
......................uGCUCUUAAAAUCUCCUAGCUAU................................................ len:23 al:6
......................CGCUCUUAAAAUCUCCUAu.................................................... len:19 al:59
......................CGCUCUUAAAAUCUCCgAGCUAU................................................ len:23 al:1
......................CGCUCUUAAAAUCUCCUAGg................................................... len:20 al:3
......................CGCUCUUAAAAUCUCaUAGCUAU................................................ len:23 al:1
......................CGCUCUUAAAAUCUCCaAGCUAUU............................................... len:24 al:1
......................CGCgCUUAAAAUCUCCUAGCUAU................................................ len:23 al:1
......................CGCUCUUAAAAUCUCCc...................................................... len:17 al:1
......................CGCcCUUAAAAUCUCCUA..................................................... len:18 al:1
......................CGCUCUUAAAAUCUCCUAGCUA................................................. len:22 al:871
......................CGCUCUUAAAAUCUCCUAGCUAU................................................ len:23 al:2645
......................CGCUCUUAAAAUuUCCUAGC................................................... len:20 al:1
......................CGCUCUUAAAAUCaCCUAGCUAU................................................ len:23 al:2
......................CGCUCUUAAAuUCUCCUAGCUAUU............................................... len:24 al:1
......................CGCUCUUgAAAUCUCCUAGCUAUU............................................... len:24 al:1
......................CGCUCUUAAAAcCUCCUAGCU.................................................. len:21 al:2
......................CGCUCUUAAgAUCUCCUAGCU.................................................. len:21 al:4
......................CGCUCUUAAAAUCUCCUAGCUAUU............................................... len:24 al:1322
......................CGCUCUUAAAAUCUCCUAGCcAU................................................ len:23 al:5
......................CGuUCUUAAAAUCUCCUAG.................................................... len:19 al:2
......................CGCaCUUAAAAUCUCCUAGCUAU................................................ len:23 al:1
......................CGCUCUUAAAAUCUCCUAGuUAUU............................................... len:24 al:15
......................CGCUCaUAAAAUCUCCUAGCUAU................................................ len:23 al:3
......................CGCaCUUAAAAUCUCCUAGC................................................... len:20 al:4
......................CGCUCUUAAAAUCUCCUAGCaAU................................................ len:23 al:1
......................CGCUCUUAAAAcCUCCUAGCUAUU............................................... len:24 al:6
......................gGCUCUUAAAAUCUCCUAGC................................................... len:20 al:1
......................CGCUCUUAAAAUCUCCcAGCUAUU............................................... len:24 al:6
......................CGCUCUUAAAAUCcCCUAGCUAUU............................................... len:24 al:2
......................CGCUCUUAAAAUCUCCUAGCUAUUaA............................................. len:26 al:1
......................CGCUCUUAAAAUCUCCUAa.................................................... len:19 al:18
......................CGCUCUUAAAAUCUCCUAGCUAcU............................................... len:24 al:15
......................CGCUCUUAAAAUCUCuUAGCU.................................................. len:21 al:1
......................uGCUCUUAAAAUCUCCUAGCUAUU............................................... len:24 al:4
......................CGCUCUUAAAgUCUCCUAG.................................................... len:19 al:2
......................CGCUCUUAAAAUCUCCUAGCUu................................................. len:22 al:31
......................CGCUCUUAAAAUCUCCUAGCcAUU............................................... len:24 al:3
......................CGCUCUUAAAAUCUCCUAaCUA................................................. len:22 al:1
......................CGCUCUUAAgAUCUCCUAGCUAU................................................ len:23 al:6
......................gGCUCUUAAAAUCUCCUAGCUAU................................................ len:23 al:1
......................aGCUCUUAAAAUCUCCUAGCUAUU............................................... len:24 al:2
......................aGCUCUUAAAAUCUCCUAGCUAU................................................ len:23 al:4
......................CGCcCUUAAAAUCUCCUAGCUAU................................................ len:23 al:5
......................CGCUCUUAAAAUCUCCUAGCUAUUcAAUA.......................................... len:29 al:3
......................CGCUCUUAAAAUCUCCUAGu................................................... len:20 al:419
......................CGCUCUUAAAAUCUCCUAGCUAa................................................ len:23 al:34
......................CGCUCUUAAcAUCUCCUAGCUA................................................. len:22 al:1
......................CGCUCUUAAAcUCUCCUAGCUAU................................................ len:23 al:3
......................CGCUCUUAAAAUCUCCUgGCUAU................................................ len:23 al:16
......................CGCUCUUAAuAUCUCCUAGC................................................... len:20 al:1
......................CGCUCUUAAAAUCUCCUAGCa.................................................. len:21 al:25
......................CGCUCUUAAAAUCUCCUAGCUAUUuA............................................. len:26 al:1
......................CGCUCUUAAAAUCcCCUAGCUA................................................. len:22 al:7
......................CGCUCUUAAAAUCUCCUgG.................................................... len:19 al:1
......................CGCUCUUAAAcUCUCCUAGCUA................................................. len:22 al:1
......................CGCUCUUAAAAUCUCCUAGuU.................................................. len:21 al:3
......................CGCUCUUAAAAUCUCCUAc.................................................... len:19 al:5
......................CGCUCUUAcAAUCUCCUAGC................................................... len:20 al:2
......................CGuUCUUAAAAUCUCCUAGCUAUU............................................... len:24 al:2
......................CaCUCUUAAAAUCUCCUAGCU.................................................. len:21 al:3
......................CGCUCUUAAAuUCUCCUAGCUAU................................................ len:23 al:1
......................CGCUCUUAgAAUCUCCUAGCUAUU............................................... len:24 al:2
......................CGCUCUUAAAAUCUCCcAGCUAU................................................ len:23 al:5
......................CuCUCUUAAAAUCUCCUAGCU.................................................. len:21 al:1
......................CGCUCUUAAAAUCUCuUA..................................................... len:18 al:5
......................CGCUCUUAAAAcCUCCUAGCUAU................................................ len:23 al:6
......................CGCUCcUAAAAUCUCCUAGCUAU................................................ len:23 al:8
......................CGCUCUUAgAAUCUCCUAG.................................................... len:19 al:1
......................CGCUCUUAAAAUCUCuUAGCUAU................................................ len:23 al:7
......................CGCUCUUAAAAUCUCCUAGCUAUUa.............................................. len:25 al:27
......................CGCUCUUAAAgUCUCCUA..................................................... len:18 al:1
......................CGCUCUUAAAAUCUCCUuGC................................................... len:20 al:1
......................CGCUCUUAAAAUCUCuUAGC................................................... len:20 al:15
......................CGCUCUUAAAAUCUCuUAGCUAUU............................................... len:24 al:4
......................CGCUCUUAAAAUCUCCUgGC................................................... len:20 al:4
......................CGCUCUUAgAAUCUCCUAGC................................................... len:20 al:8
......................CGCUCUUAAAAUCUCCUAGCU.................................................. len:21 al:593
......................CGCUaUUAAAAUCUCCUAGCUAU................................................ len:23 al:1
......................CGCUCUUAAAAUCUCCUuG.................................................... len:19 al:1
......................CGCUCUUAAAAUCcCCUAG.................................................... len:19 al:2
......................CGCUCUUAAAAUCUCCUAGCUAUa............................................... len:24 al:77
......................CGuUCUUAAAAUCUCCUAGCU.................................................. len:21 al:2
......................CGCUCUUAAAAUCUCCUAGCUgUU............................................... len:24 al:4
......................CGCUCUUAAAAUCUCCUcGC................................................... len:20 al:3
......................CGCUCUUAAAAUCUCCcAGC................................................... len:20 al:5
......................CGCUCUUAAAAUCUCCUAGCUAUUc.............................................. len:25 al:1
......................CGCUCUUAAAAUCUCCcA..................................................... len:18 al:1
......................CGCUCUUAAAAUCUC........................................................ len:15 al:3
......................CGCUCUUAAAAUCUuCUAGCU.................................................. len:21 al:2
......................CGCUCUUAAAAUCUCCUAGCUg................................................. len:22 al:3
......................CGCUgUUAAAAUCUCCUAGC................................................... len:20 al:1
......................CGCUCcUAAAAUCUCCUAGCU.................................................. len:21 al:1
......................CGCUCUUAAAAUCUCCUAGCUAgU............................................... len:24 al:15
......................CGCcCUUAAAAUCUCCUAGC................................................... len:20 al:12
......................CGCUCUUAAAAUCUaCUAGCUAU................................................ len:23 al:1
......................CGCUCUUAAAAUCUCCUcGCU.................................................. len:21 al:1
......................CGCUCUUAAAAUCUCCUAGCc.................................................. len:21 al:46
......................CGCUCUUAAAAUCUuCUAGC................................................... len:20 al:1
......................CGCUCcUAAAAUCUCCUA..................................................... len:18 al:1
......................CGCUCcUAAAAUCUCCUAG.................................................... len:19 al:2
......................CGCUCUUAAAuUCUCCUAGCU.................................................. len:21 al:1
......................CGCUCUUAAAAUCUCCUAGCUc................................................. len:22 al:1
......................CGCUCUUAAAAUCUCCaAGCUAU................................................ len:23 al:2
......................CGCUCUUAAAAcCUCCUAGCUA................................................. len:22 al:7
......................CGCUCUUAAAAUCUCCUAaCUAU................................................ len:23 al:2
......................CGCUCUUAAAAUCUCCUAGCUAUUcAAUAGC........................................ len:31 al:4
......................CGCUCUUAAAAUCUCCU...................................................... len:17 al:28
......................CGCUCUUAuAAUCUCCUAGCUAU................................................ len:23 al:1
......................CGCUCUUAgAAUCUCCUAGCUAU................................................ len:23 al:11
......................CGCUCUUAAAcUCUCCUAGCUAUU............................................... len:24 al:2
......................CGCUCUUAAAAUCUCCUAGCg.................................................. len:21 al:3
......................CGCcCUUAAAAUCUCCUAGCUA................................................. len:22 al:2
......................CGCUCUUAAAAUCcCCUAGC................................................... len:20 al:15
......................CGCUCUUAAAAUCUCCUAGCUgU................................................ len:23 al:69
......................CGCUCUUAAAgUCUCCUAGCUA................................................. len:22 al:2
......................CGCUCUUAAAAcCUCCUA..................................................... len:18 al:1
......................CGCUCUUAAAAUCUCCcAGCUA................................................. len:22 al:2
......................CGCUCUUAAAAUCUCCUAGCUAUg............................................... len:24 al:3
......................CGCUCcUAAAAUCUCCUAGC................................................... len:20 al:7
......................CGCUCUUAgAAUCUCCUAGCUA................................................. len:22 al:2
......................CGCUCUUAAAAUCUCCUAGCaA................................................. len:22 al:1
......................CGCUgUUAAAAUCUCCUAGCU.................................................. len:21 al:1
......................aGCUCUUAAAAUCUCCUAGCUA................................................. len:22 al:1
......................CGCUCUUAAAAUCUCCUAGCUAUc............................................... len:24 al:77
......................CaCUCUUAAAAUCUCCUAGCUAUU............................................... len:24 al:8
......................CGCUCUcAAAAUCUCCUAGCUAUU............................................... len:24 al:2
......................CGCUCUUAAAAUCUCCa...................................................... len:17 al:1
......................CGCUCUUAAAAUuUCCUAGCUAUU............................................... len:24 al:1
......................CGCUCUUAAAAUCUCCUAaC................................................... len:20 al:16
......................gGCUCUUAAAAUCUCCUAG.................................................... len:19 al:1
......................CGCUCUUAAAAUCUCCUAGuUAU................................................ len:23 al:14
......................CGCUCUUcAAAUCUCCUAGCUAU................................................ len:23 al:4
......................CGCUCUUAAAuUCUCCUAGC................................................... len:20 al:1
......................CGCUCUUAAAAUCcCCUAGCU.................................................. len:21 al:2
......................CuCUCUUAAAAUCUCCUAGCUA................................................. len:22 al:1
......................CGCUCUUAAgAUCUCCUAGCUA................................................. len:22 al:2
......................CGCUCUUAAAgUCUCCUAGC................................................... len:20 al:11
......................CGCUCaUAAAAUCUCCUAGC................................................... len:20 al:1
......................CGCUCUUAAAgUCUCCUAGCUAUU............................................... len:24 al:5
......................CGCUCUUAAcAUCUCCUAGC................................................... len:20 al:3
......................CGCUCUUAcAAUCUCCUAGCUAUU............................................... len:24 al:3
......................CGuUCUUAAAAUCUCCUAGC................................................... len:20 al:1
......................CGCUCUUAAAAUCUCCUAuCUAUU............................................... len:24 al:1
......................CGCUCUUAAAAUCUCCUcGCUAUU............................................... len:24 al:1
......................CGCUCUUAAAAUCUCCUAGuUA................................................. len:22 al:2
......................CGCUCUUAAAAUCUCCUAGCUAc................................................ len:23 al:186
......................CGCUCUUAAAAUCUCCUAuCUA................................................. len:22 al:1
......................CGCcCUUAAAAUCUCCUAGCUAUU............................................... len:24 al:5
......................CGCUCUUAAgAUCUCCUAGC................................................... len:20 al:3
......................CGCUCUUAAAAUCUCCUAGa................................................... len:20 al:64
......................CGCUCUUAAAAUCUCCUAGCUcU................................................ len:23 al:1
......................CGCUCUUAAcAUCUCCUAGCUAU................................................ len:23 al:1
......................CGCUCUUAAAAgCUCCUAGC................................................... len:20 al:1
......................CGCUCUUAAAAUCUCC....................................................... len:16 al:3
......................CGCUCUUAAAAUCUCCUAcCUAUU............................................... len:24 al:2
......................CGCUCUUcAAAUCUCCUAGC................................................... len:20 al:3
......................CGCUCUUAAAAUCUCCUAGC................................................... len:20 al:3706
......................CGCUCUUAcAAUCUCCUAGCU.................................................. len:21 al:1
......................CGCgCUUAAAAUCUCCUAGC................................................... len:20 al:3
......................CGCUCUUAAAAUCUCCUAGCUuU................................................ len:23 al:47
......................CGCUCUUAAAAUCUCCUAGCUAaU............................................... len:24 al:24
.......................GCUCUUAAAAUCUCCUAG.................................................... len:18 al:8
.......................GCUCUUAAAAUCUCCUA..................................................... len:17 al:1
.......................aCUCUUAAAAUCUCCUAGC................................................... len:19 al:1
.......................GCUCUUAAAAUCUCCUAGCUAUUu.............................................. len:24 al:1
.......................GCUCUUAAAAUCUCCUAGCUAUa............................................... len:23 al:1
.......................GCUCUUAAAAUCUCCUAGCUAUUcAAUAGCU....................................... len:31 al:1
.......................GCUCUUAAAAUCUCCUAGC................................................... len:19 al:23
.......................GCUCUUAAAAUCUCCUAGCa.................................................. len:20 al:1
.......................GCUCUUAAAAUCUCCUAGCUAUc............................................... len:23 al:1
.......................GCUCUUAAAAUCUCCUAGCU.................................................. len:20 al:31
.......................GCUCUUAAAAUCUCCUAu.................................................... len:18 al:3
.......................GCUCUUAAAAUCUCCUAGCc.................................................. len:20 al:1
.......................GCUCUUAAAAUCUCCUAc.................................................... len:18 al:1
.......................GCUCUUAAAAUCUCCUAGCUAc................................................ len:22 al:1
.......................GCUCUUAAAAUCUCCUAGCUA................................................. len:21 al:16
.......................GCUCUUAAAAUCUCCUAGuUAUU............................................... len:23 al:2
.......................GCUCUUAAAAUCUCCUAGu................................................... len:19 al:1
.......................GCUCUUAAAAUCUCCUAGCUAUU............................................... len:23 al:17
.......................GCUCUUAAAAUCUCCUAGaU.................................................. len:20 al:1
.......................GCUCUUAAAAUCUCCUAGCUAU................................................ len:22 al:27
........................CUCUUAAAAUCUCCUAGCc.................................................. len:19 al:1
........................CUCUUAAAAUCUCCUAGCU.................................................. len:19 al:4
........................CUCUUAAAAUCUCCUAGCUA................................................. len:20 al:12
........................CUCUUAAAAUCUCCUAGCUu................................................. len:20 al:1
........................CUCUUAAAAUCUCCUAGCUAa................................................ len:21 al:1
........................CUCUUAAAAUCUCCUAGCUAUa............................................... len:22 al:1
........................CUCUUAAAAUCUCCUAGCUAU................................................ len:21 al:22
........................CUCUUAAAAUCUCCUAGC................................................... len:18 al:5
........................CUCUUAAAAUCUCaUAGCUAU................................................ len:21 al:2
........................CUCUUAAAAUCUCCUAGCUAUU............................................... len:22 al:3
........................CcCUUAAAAUCUCCUAGCUAU................................................ len:21 al:1
.........................UCUUAAAAUCUCCUAGCUAUU............................................... len:21 al:3
.........................UCUUAAAAUCUCCUAGCUAU................................................ len:20 al:5
.........................UCUUAAAAUCUCCUAGCUgU................................................ len:20 al:1
.........................UCUUAAAAUCUCCUAGaU.................................................. len:18 al:1
..........................CUUAAAAUCUCCUAGCUAU................................................ len:19 al:2
..........................CUUAAAAUCUCCUAGCUAUU............................................... len:20 al:1
..........................CUUAAAAUCUCCUAGCUA................................................. len:18 al:4
..........................CUUAAAAUCUCCUAGCUAUUcAAUA.......................................... len:25 al:1
...........................UUAAAAUCUCCUAGCUAUa............................................... len:19 al:2
...........................UUAAAAUCUCCUAGCUgU................................................ len:18 al:1
...........................UUAAAAUCUCCUAGCUuU................................................ len:18 al:1
...........................UUAAAAUCUCCUAGCUAUU............................................... len:19 al:2
...........................UUAAAAUCUCCUAGCUA................................................. len:17 al:2
...........................UUAAAAUCUCCUAGCUAU................................................ len:18 al:14
............................UAAAAUCUCCUAGCUAUU............................................... len:18 al:2
..........................................UAUUcAAUAGCUAGGAGGUUUUAAAAGAGGA.................... len:31 al:3
...........................................AUUcAAUAGCUAGGAGGUUUUAAAAGAGGA.................... len:30 al:5
............................................UUcAAUAGCUAGGAGGUUUUAAAAGAGGA.................... len:29 al:3
.............................................UcAAUAGCUAGGAGGUUUUA............................ len:20 al:1
................................................AUAGCUAGGAGGUUUUAAAAG........................ len:21 al:2
.................................................UAGCUAGGAGGUUUUAAAAGAGG..................... len:23 al:1
..................................................AGCUAGGAGGUUUUAAAAGAGGA.................... len:23 al:2
..................................................AGCUAGGAGGUUUUAAAAGAGG..................... len:22 al:1
...................................................GCUAGGAGGUUUUAAAAGAGG..................... len:21 al:46
...................................................aCUAGGAGGUUUUAAAAGA....................... len:19 al:1
...................................................GCUAGGAGGUUUUAAAAGAGGAGA.................. len:24 al:4
...................................................GCUAGGAGGUUUUAAAAGAGu..................... len:21 al:8
...................................................GCUAGGAGGUUUUAAAAGAu...................... len:20 al:2
...................................................GCUAGGAGGUUUUgAAAGAGG..................... len:21 al:7
...................................................GCUAGGAGGUcUUAAAAGAGGA.................... len:22 al:1
...................................................GCUAGGAGGUUUUAAAAGAGGAc................... len:23 al:13
...................................................GCUAGGAGGUUUUAAAgGAGGA.................... len:22 al:2
...................................................GCUAGGAGGUUUUAAAAGAGa..................... len:21 al:8
...................................................GCUgGGAGGUUUUAAAAGAGGA.................... len:22 al:4
...................................................GCUAGGAGGUUUUAAA.......................... len:16 al:1
...................................................GCUAGGAGGUUUUgAAAGAGGA.................... len:22 al:19
...................................................GCUuGGAGGUUUUAAAAGAGGA.................... len:22 al:2
...................................................GCUAGGAGGUUUUAAAAGA....................... len:19 al:8
...................................................GCUAGGAGGUUUUAAAAGAG...................... len:20 al:32
...................................................GCUAGGAGGUUUUgAAAG........................ len:18 al:1
...................................................GCUAGGAGGUUUUAAAAGAGGAGu.................. len:24 al:1
...................................................aCUAGGAGGUUUUAAAAGAGG..................... len:21 al:2
...................................................GCUAGGAGGUUUUAAAAGAGGAu................... len:23 al:189
...................................................GCUAGGAGGUUUUAAgAGAGG..................... len:21 al:2
...................................................GCUgGGAGGUUUUAAA.......................... len:16 al:1
...................................................GCUAGGgGGUUUUAAAAGAGGA.................... len:22 al:1
...................................................GCUAGGAGGUUUUAAAAGAGGAG................... len:23 al:1
...................................................GCUAGGAGGUUUUAAAAGgGGA.................... len:22 al:3
...................................................GCUAGGAGGUUUUgAAAGA....................... len:19 al:1
...................................................GCcAGGAGGUUUUAAAAGAGGA.................... len:22 al:1
...................................................GCUAGGAGGUUUUAAAAGAGcA.................... len:22 al:1
...................................................GCUAGGAGGUUUUAAAAGAGGA.................... len:22 al:356
...................................................GCUAGGAGGUUUUAAgAGAGGA.................... len:22 al:1
...................................................GCUAGGAGGUUUUAAAAGAGGAGc.................. len:24 al:1
...................................................GCUAGGAGGUUUUAAAAGu....................... len:19 al:2
...................................................aCUAGGAGGUUUUAAAAGAGGA.................... len:22 al:5
...................................................GCUAGGAGGUUUUAAAAGAGGAa................... len:23 al:4
...................................................GCUAGGAGGUUUUAAAAGAGGu.................... len:22 al:19
...................................................GCUcGGAGGUUUUAAAAG........................ len:18 al:1
...................................................GCUAGGAGGUUUUAAAAGAGGAuA.................. len:24 al:11
...................................................GCUAGGAGGUUUUAAAAG........................ len:18 al:15
...................................................GCUAaGAGGUUUUAAAAGAGG..................... len:21 al:1
...................................................GCUAGGAGGUUUUAgAAGAGGA.................... len:22 al:1
...................................................GCUAGGAGGUUUUAAAAGAGGg.................... len:22 al:5
....................................................CUAGGAGGUUUUAAAAGAGGAGAu................. len:24 al:1
....................................................CUAGGAGGUUUUAAAAGAGGAGA.................. len:23 al:28
....................................................CUAGGAGGUUUUAAAAGAGG..................... len:20 al:2
....................................................CUAGGAGGUUUUAAAAGAGu..................... len:20 al:1
....................................................CUAGGAGGUUUUAAAAGAGGAGu.................. len:23 al:1
....................................................CUAGGAGGUUUUAAAAGAGGA.................... len:21 al:1
....................................................CUAGGAGGUUUUAAAAGA....................... len:18 al:3
.....................................................UAGGAGGUUUUAAgAGAGG..................... len:19 al:6
.....................................................UAGGAGGUUUUAAAAGAGGAc................... len:21 al:3
.....................................................UgGGAGGUUUUAAAAGAGGA.................... len:20 al:1
.....................................................UAGGAGGUUUUAAAAGAa...................... len:18 al:1
.....................................................aAGGAGGUUUUAAAAGAGGA.................... len:20 al:2
.....................................................UAGGAGGUUUUAAAgGAGG..................... len:19 al:1
.....................................................UAaGAGGUUUUAAAAGAGG..................... len:19 al:2
.....................................................UAGGAGGUUUUgAAAGAG...................... len:18 al:1
.....................................................UAGGAGGUUUUAAAgGAGGA.................... len:20 al:2
.....................................................UAGGAGGUUUUAAAAGAGGAu................... len:21 al:80
.....................................................UAGGAGGUUUUAAgAGAG...................... len:18 al:1
.....................................................UAGGAGGUUUUAAAAGAGGA.................... len:20 al:190
.....................................................UAcGAGGUUUUAAAAGAGG..................... len:19 al:1
.....................................................UAGGcGGUUUUAAAAGAGG..................... len:19 al:1
.....................................................aAGGAGGUUUUAAAAGAGG..................... len:19 al:2
.....................................................UAGGAGGUUUUAAAAGAGGc.................... len:20 al:3
.....................................................UAGGgGGUUUUAAAAGAG...................... len:18 al:2
.....................................................UAGGAGGUUUUAAAAGAGGAGAa................. len:23 al:1
.....................................................UAGGAGGUUUUAAAAGA....................... len:17 al:3
.....................................................UAGGAGGUUUUAAAAGAu...................... len:18 al:3
.....................................................UAGGAGGUUUUgAAAGAGG..................... len:19 al:1
.....................................................UAGGAGGUUUUAAgAGAGGA.................... len:20 al:7
.....................................................UAGGAGGUUUUAAAAGAGG..................... len:19 al:111
.....................................................UAGGgGGUUUUAAAAGAGGA.................... len:20 al:1
.....................................................UAGGAGGUUUUAAAAGAGu..................... len:19 al:5
.....................................................UcGGAGGUUUUAAAAGAGGA.................... len:20 al:1
.....................................................UAGGAGGUUUUAAAAGAG...................... len:18 al:40
.....................................................UAGGAGGUUUUAAAAGAGa..................... len:19 al:8
.....................................................UAGGAGGUUUUAcAAGAGG..................... len:19 al:1
.....................................................UAGGAGGUUUUAAAAG........................ len:16 al:2
.....................................................UAGGAGGUUUUAAAAGAGGAa................... len:21 al:5
.....................................................UAGGAGGUUUUAAAAGAGGAuA.................. len:22 al:2
......................................................AGGAGGUUUUAAAAGAGG..................... len:18 al:2
......................................................AGGAGGUUUUAAAAGAGGAu................... len:20 al:1