Genome: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/F-Ptua/data/Pocillopora_meandrina_HIv1.assembly.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/F-Ptua/output/04-Ptua-sRNA-discovery-ShortStack/ShortStack_out/merged_alignments.bam
Location: Pocillopora_meandrina_HIv1___Sc0000018:6855499-6855592 plus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/F-Ptua/output/04-Ptua-sRNA-discovery-ShortStack/ShortStack_out/strucVis/Cluster_4826.ps.pdf
Locus Name: Cluster_4826
AAAAAUAAAAACAUUGUAGAGCUCACCCAACAGUUUUAAUCUGAUUUAUUCGGAUUAAAAUUUGUUGGGUGUGCUUUACAUGUCUUGUAUACAG
..........((((.(((((((.(((((((((((((((((((((.....))))))))))).)))))))))).)))))))))))........... (-41.10)
.AAAAUAAAAACAUUGUAGAGC........................................................................ len:21 al:1
.AAAAUAAAAACAUUGUAGAG......................................................................... len:20 al:1
..AAAUAAAAACAUUGUAGAGC........................................................................ len:20 al:2
...AAUAAAAACAUUGUAGAGa........................................................................ len:19 al:1
...........CAUUGUAGAGCUCACCCAACAGUUUUA........................................................ len:27 al:1
............AUUGUAGAGCUCACCCAACAGUUUUAAU...................................................... len:28 al:1
.....................CUCACCCAACAGUUUUAAUCUGAUU................................................ len:25 al:1
......................UCACCCAACAGUUUUAAUu..................................................... len:19 al:4
......................UCACCCAACAGUUUUAAUCcGAUU................................................ len:24 al:10
......................UCuCCCAACAGUUUUAAUCUGAUU................................................ len:24 al:1
......................UCACCCAACAGUUUUAgUCUGAU................................................. len:23 al:10
......................UCACCCAcCAGUUUUAAUCUGAUUU............................................... len:25 al:1
......................UCACCCAcCAGUUUUAAUCUGAU................................................. len:23 al:3
......................UCACCCAACAGUUcUAAUC..................................................... len:19 al:1
......................UCACCCcACAGUUUUAAUCUGAU................................................. len:23 al:4
......................UuACCCAACAGUUUUAAUCUGAUU................................................ len:24 al:4
......................UCACCCgACAGUUUUAAUCUGA.................................................. len:22 al:1
......................UCACCCAAuAGUUUUAAUCUGA.................................................. len:22 al:1
......................UCACCCAACAGUUUUAAUCUGAUaU............................................... len:25 al:6
......................UCACCCAACcGUUUUAAUCUGAUU................................................ len:24 al:1
......................UCACCCAACAGUUUUAAUuUGAU................................................. len:23 al:6
......................UCAgCCAACAGUUUUAAUC..................................................... len:19 al:1
......................UCACCuAACAGUUUUAAUCUGAU................................................. len:23 al:5
......................aCACCCAACAGUUUUAAUCUG................................................... len:21 al:1
......................UCACCCAACAGUUUUAAUCUGgU................................................. len:23 al:89
......................UCACCCAACAGUUUUAAUCUGAUU................................................ len:24 al:2856
......................cCACCCAACAGUUUUAAUCUGA.................................................. len:22 al:4
......................UCACCCAACAGUUUUAAUCUGAc................................................. len:23 al:290
......................UCACCCAACAGUUUUAAUuUGAUUU............................................... len:25 al:4
......................UCACCCAACAGUUUUAAUCcG................................................... len:21 al:1
......................UCACCCAACAGUUUUAAUCUGcU................................................. len:23 al:1
......................UCACCCgACAGUUUUAAUCUGAU................................................. len:23 al:10
......................UCuCCCAACAGUUUUAAUCUGAU................................................. len:23 al:1
......................UCACCCAACgGUUUUAAUCUGA.................................................. len:22 al:5
......................UCACCCAACAGUUUUAAUCU.................................................... len:20 al:56
......................UCACCCAACAGaUUUAAUCUGAU................................................. len:23 al:2
......................UCgCCCAACAGUUUUAAUCUGA.................................................. len:22 al:2
......................UCACCCAACAaUUUUAAUCUGAU................................................. len:23 al:1
......................UCACCCAACAGUUUUAAUCUGAUUUAUUC........................................... len:29 al:1
......................UCACCCAACAGUUUUAAcCUGAUU................................................ len:24 al:7
......................UCACCCAACAGUUUUAAcCUGAU................................................. len:23 al:16
......................UCACCCAACAGUUUUAAUCc.................................................... len:20 al:6
......................UCACCCAACAGUcUUAAUCUGA.................................................. len:22 al:1
......................UCACCCAACAGUUcUAAUCUGAUU................................................ len:24 al:5
......................UCACCCAACAGcUUUAAUCUGA.................................................. len:22 al:1
......................UCcCCCAACAGUUUUAAUCUGAUU................................................ len:24 al:1
......................UCgCCCAACAGUUUUAAUCUG................................................... len:21 al:1
......................UCACCCAcCAGUUUUAAUCUGA.................................................. len:22 al:1
......................UCACCCcACAGUUUUAAUCUGAUU................................................ len:24 al:3
......................UCACCCAACgGUUUUAAUCUGAUU................................................ len:24 al:16
......................UCACCCAACAGUUUUAAUCUGgUUU............................................... len:25 al:1
......................UCACCCAACAGUUUUAAUCa.................................................... len:20 al:2
......................UCACCCAACAGUUUUAAUCUGAUUUAU............................................. len:27 al:2
......................UCACCCAACAGUUUUAAUCUGAUUa............................................... len:25 al:60
......................UCACCCAACAGUUUUAAUCUcAUU................................................ len:24 al:1
......................UCACCCAACAGUUUUAAcCUGA.................................................. len:22 al:1
......................UCACCCAACAGUUcUAAUCUGAU................................................. len:23 al:4
......................UCACCCAACAGUUUcAAUCUGAU................................................. len:23 al:3
......................UCACCCAACAGUUUUAAUCUGAcU................................................ len:24 al:21
......................UCACCCAACAGUUUcAAUCUGAUU................................................ len:24 al:1
......................UCgCCCAACAGUUUUAAUCUGAUU................................................ len:24 al:14
......................UCACCCAACAGUcUUAAUCUGAU................................................. len:23 al:8
......................UCACCCAACAGUUUUAAUCUGAUgU............................................... len:25 al:7
......................UCACCCAACAGUUUUAgUCUGA.................................................. len:22 al:1
......................UCACCCAACAGaUUUAAUCUGA.................................................. len:22 al:1
......................UCACCCAACAGUUUUAAc...................................................... len:18 al:3
......................UCACCCAACAGUUUUgAUC..................................................... len:19 al:1
......................UCACCCAACAGUUUUAAUCUG................................................... len:21 al:140
......................UCACCCAACAGgUUUAAUCUGAU................................................. len:23 al:3
......................UCACCCAACAGUUUUAAUCUGAUUUAa............................................. len:27 al:2
......................UCACCCAACAGUUUUAcUCUGAUU................................................ len:24 al:1
......................gCACCCAACAGUUUUAAUCUGAU................................................. len:23 al:1
......................UCACCCAACAGUUUUAAUCUGAg................................................. len:23 al:9
......................UCACgCAACAGUUUUAAUCUGAUU................................................ len:24 al:1
......................UCACCCAACAGUUUUAAUCUGAUa................................................ len:24 al:257
......................UCACCCAACAGUUUUAAUCUGg.................................................. len:22 al:4
......................UCACCCAACAGUUUUAAUCUGAUUU............................................... len:25 al:381
......................UCACCCAACAGUUUUAAUCUGAUUc............................................... len:25 al:26
......................UCACCCAACAGUUUUgAUCUGAUU................................................ len:24 al:5
......................UCACCCAACAGUUUUgAUCUGA.................................................. len:22 al:2
......................UCAuCCAACAGUUUUAAUCUGAUU................................................ len:24 al:3
......................aCACCCAACAGUUUUAAUCUGA.................................................. len:22 al:1
......................UCACCCAACAGUUUUAAUCUGc.................................................. len:22 al:1
......................UCACCCAACAGUUaUAAUCUGAUU................................................ len:24 al:1
......................UCACCCAACAGUUUUAgUCUGAUU................................................ len:24 al:4
......................UCACCCAACAGUUUUAAUuUGA.................................................. len:22 al:1
......................UCACCCAACAGUUUUAAcCUGAUUU............................................... len:25 al:4
......................UCACCCAACAGUUUUAAUCUGAaUU............................................... len:25 al:15
......................UCACCCAACAGUUUUgAUCUGAU................................................. len:23 al:4
......................UCACCCAACgGUUUUAAUCUGAU................................................. len:23 al:9
......................UCACCCAACAGUUUUAAUCUa................................................... len:21 al:5
......................UCACCuAACAGUUUUAAUCUGAUU................................................ len:24 al:3
......................UCACCCAgCAGUUUUAAUCUGAUUU............................................... len:25 al:2
......................UCACCCAACAuUUUUAAUCUGAUU................................................ len:24 al:1
......................UCACCCAACAGUUUUAAU...................................................... len:18 al:36
......................UCACCCAACAGUUUUAAUCUaA.................................................. len:22 al:2
......................UCAuCCAACAGUUUUAAUCUGAU................................................. len:23 al:6
......................UCACCCAACAGUUUUAAUCaGAUUU............................................... len:25 al:1
......................UCACaCAACAGUUUUAAUCUGAU................................................. len:23 al:1
......................UCACCCAACAGUUUUAAUCUGAUUUu.............................................. len:26 al:10
......................UCACCCgACAGUUUUAAUCUGAUU................................................ len:24 al:7
......................UCACCCAgCAGUUUUAAUCUGA.................................................. len:22 al:5
......................UCACCCAACAGUUUUAAUCUGAUg................................................ len:24 al:11
......................gCACCCAACAGUUUUAAUCUG................................................... len:21 al:1
......................aCACCCAACAGUUUUAAUC..................................................... len:19 al:1
......................UCACCCAACAGUUUUAAUC..................................................... len:19 al:186
......................UCACCCAAaAGUUUUAAUCUGAU................................................. len:23 al:2
......................UCACCCAACAGUUUUAAUCUGAgU................................................ len:24 al:37
......................UCACCCuACAGUUUUAAUCUGAUU................................................ len:24 al:2
......................UCuCCCAACAGUUUUAAUC..................................................... len:19 al:1
......................UCACCCAACAGUUUUAAUCcGAU................................................. len:23 al:12
......................aCACCCAACAGUUUUAAUCUGAUU................................................ len:24 al:6
......................UCACCCAACAGUUUUAAUCUGAU................................................. len:23 al:4018
......................UCACCCAACAGUUUUAAUCUGu.................................................. len:22 al:23
......................UCACCCAACAGUUUUAAUCUGAaU................................................ len:24 al:42
......................UCACCCuACAGUUUUAAUCUGAU................................................. len:23 al:1
......................UCACCCAAaAGUUUUAAUCUGAUU................................................ len:24 al:3
......................UCACCCAACAGgUUUAAUCUGAUU................................................ len:24 al:2
......................UCACCCAACAGUUUU......................................................... len:15 al:2
......................cCACCCAACAGUUUUAAUCUGAU................................................. len:23 al:25
......................UCACCCAACAGUUUUAAUuUGAUU................................................ len:24 al:38
......................aCACCCAACAGUUUUAAUCUGAU................................................. len:23 al:11
......................UCACCCAACAGUUUUAuUCUGA.................................................. len:22 al:1
......................UCACCCAACAGUUUUAcUCUGAU................................................. len:23 al:3
......................UCACCCAACAGUUUUAAUCUGAUcU............................................... len:25 al:25
......................UCACCCAACAGUUUUAAUCUGAUc................................................ len:24 al:168
......................UCACCCAACAGUUUUAAUCUGAUUg............................................... len:25 al:1
......................UCACCCAACAGUaUUAAUCUGAUU................................................ len:24 al:1
......................UCACCCAcCAGUUUUAAUCUGAUU................................................ len:24 al:1
......................UCACCCAACAGUUUUAAUaU.................................................... len:20 al:4
......................UCACCCAACAGUUUUAAUCUGAaUUA.............................................. len:26 al:1
......................UCAaCCAACAGUUUUAAUCUGAU................................................. len:23 al:1
......................UCACCCAACAGUUUUAAUuU.................................................... len:20 al:2
......................UCACCCAACAGUUUUAAUCUGuU................................................. len:23 al:1
......................UuACCCAACAGUUUUAAUCUGA.................................................. len:22 al:1
......................UCACCCAACAGUUUUAAUCUGgUU................................................ len:24 al:11
......................UCACCCAACAGcUUUAAUCUGAUU................................................ len:24 al:14
......................UCACCCAuCAGUUUUAAUCUGAU................................................. len:23 al:1
......................UCcCCCAACAGUUUUAAUCUGAU................................................. len:23 al:7
......................UCACCCAACcGUUUUAAUCUGAU................................................. len:23 al:2
......................UCACCCAACAGUUUUAAUCUGcUU................................................ len:24 al:3
......................UCACCCAAuAGUUUUAAUCUGAU................................................. len:23 al:2
......................UCACCCAACAGUUUUAAUCUGAa................................................. len:23 al:49
......................UCACCCAACAGUUUUAAUCUGAUUUAUUCG.......................................... len:30 al:1
......................UCACCCAACAGUUUcAAUCUGA.................................................. len:22 al:1
......................UCgCCCAACAGUUUUAAUCUGAU................................................. len:23 al:13
......................UCACCCAAuAGUUUUAAUCUGAUU................................................ len:24 al:3
......................UuACCCAACAGUUUUAAUCUGAU................................................. len:23 al:2
......................UCACCCAACuGUUUUAAUCUGAU................................................. len:23 al:1
......................UCACCCAACAGUUUUAAUCUGAUUaA.............................................. len:26 al:3
......................UCACCCAAuAGUUUUAAUCUG................................................... len:21 al:1
......................UCACCCAACAGUcUUAAUCUGAUU................................................ len:24 al:3
......................UCACCCAACAGUUUUAAUCUGA.................................................. len:22 al:845
......................UCACCCAACAGUUUUcAUCUGAUU................................................ len:24 al:2
......................UCACCCAACAGUUUaAAUCUGAU................................................. len:23 al:2
......................UCACCCAACAGcUUUAAUCUGAU................................................. len:23 al:15
......................UCACCCAgCAGUUUUAAUCUGAU................................................. len:23 al:21
......................cCACCCAACAGUUUUAAUCUGAUU................................................ len:24 al:15
......................UCACCCAACgGUUUUAAUC..................................................... len:19 al:3
......................UCACCCAACAGUUUUAAUa..................................................... len:19 al:1
......................UCACCCAACAGUUUUAAUCaGAUU................................................ len:24 al:1
......................UCACCCAACAGUUUUAAUCUGAUUUA.............................................. len:26 al:5
......................UCACuCAACAGUUUUAAUCUGAU................................................. len:23 al:4
......................UCACCCAACAGUUUUcAUCUGAU................................................. len:23 al:3
......................UCACCCAACAGUUaUAAUCUGA.................................................. len:22 al:1
......................UCACCCAgCAGUUUUAAUCUGAUU................................................ len:24 al:10
.......................CACCCAACAGUUUUAAUCUGAU................................................. len:22 al:12
.......................CACCCAACAGUUUUAAUCUGA.................................................. len:21 al:1
.......................CACCCAACAGUUUUAAUCU.................................................... len:19 al:2
.......................CACCCAACAGUUUUAAUCUGAUa................................................ len:23 al:1
.......................CACCCAACAGUUUUAAUCUGAUU................................................ len:23 al:7
.......................CACCCAACAGUUUUAAUCa.................................................... len:19 al:1
.......................CACCCAACAGUUUUAAUCUGAc................................................. len:22 al:1
........................ACCCAACAGUUUUAAUCUGAc................................................. len:21 al:1
........................ACCCAACAGUUUUAAUCUGAUU................................................ len:22 al:4
........................ACCCAACAGUUUUAAUCUGA.................................................. len:20 al:2
........................cCCCAACAGUUUUAAUCUGAUUU............................................... len:23 al:1
........................ACCCAACAGUUUUAAUCUGAU................................................. len:21 al:2
.........................CCCAACAGUUUUAAUCUGu.................................................. len:19 al:1
..........................CCAACAGUUUUAAUCUGAUU................................................ len:20 al:1
.......................................UCUGAUUUAUUCGGAUUAAAAUUUGUUGGGU........................ len:31 al:1
........................................CUGAUUUAUUCGGAUUAAAAUUUGUUGG.......................... len:28 al:1
........................................CUGAUUUAUUCGGAUUAAAAUUUGUU............................ len:26 al:1
..........................................GAUUUAUUCGGAUUAAAAUUUGUU............................ len:24 al:2
..........................................GAUUUAUUCGGAUUAAAAUUUGUUGGG......................... len:27 al:1
..........................................GAUUUAUUCGGAUUAAAAUUUGUUGGGU........................ len:28 al:2
..........................................GAUUUAUUuGGAUUAAAAUUUGUUGGGU........................ len:28 al:3
...........................................AUUUAUUCGGAUUAAAAUUUGUUGGaUGUGC.................... len:31 al:1
...........................................AUUUAUUCGGAUUAAAAUUUGUUGGGUGUGa.................... len:31 al:1
...........................................AUUUAUUCGGAUUAAAAUUUGUUGGGUGUGu.................... len:31 al:3
...........................................AUUUAUUCGGAUUAAAAUUUGUUGaGUGUGC.................... len:31 al:1
...........................................AUUUAUUuGGAUUAAAAUUUGUUGGGUGUGC.................... len:31 al:5
...........................................AUUUAUUCGGAUUAAAAUUUGUUGGGUGUGC.................... len:31 al:35
............................................UUUAUUuGGAUUAAAAUUUGUUGGGUGUGC.................... len:30 al:306
............................................UUUAUUCGGAUUAAAAUUUGcUGGGUGUGC.................... len:30 al:2
............................................UUUAUUCGGAUUAAAAUUUGUUGGGUGUGa.................... len:30 al:1
............................................UUUAUUCGGAUUAAAAUUUGUUGGGUGUGu.................... len:30 al:8
............................................UcUAUUCGGAUUAAAAUUUGUUGGGUGUGC.................... len:30 al:1
............................................UUUAUUCGGAUUAAAAUUUGUUGaGUGUGC.................... len:30 al:1
............................................UUUAUUCGGAUUAAAAUUUGUUGGGUGcGC.................... len:30 al:1
............................................UUUAUUuGGAUUAAAAUUUGUUGGGUGUGCU................... len:31 al:17
............................................UUUAUUuGGAUUAAAAUUUGUUGGGU........................ len:26 al:1
............................................UUUAUUCGGAUUAAAAUUUGUUGGGUGUGCU................... len:31 al:2
............................................UUUAUUuGGAUUAAAAUUUGUUGGGUGUG..................... len:29 al:1
............................................UUUAUUCGGAUgAAAAUUUGUUGGGUGUGC.................... len:30 al:1
............................................UUUAUUuGGAUUAAAAUUUGUUGGG......................... len:25 al:2
............................................UUUAUUCGGAUUAAAAUUUGUUGGGUGUGC.................... len:30 al:103
............................................UUUAUUCGGAUUAAgAUUUGUUGGGUGUGC.................... len:30 al:2
.............................................UUAUUuGGAUUAAAAUUUGUUGGGUGUGC.................... len:29 al:16
.............................................UUAUUuGGAUUAAAAUUUGUUGGGUGUGCU................... len:30 al:3
.............................................UUAUUCGGAUUAAAAUUUGUUGGGUGUGC.................... len:29 al:2
..............................................UAUUCGGAUUAAAAUUUGUUGGGUGUGC.................... len:28 al:1
..............................................UAUUuGGAUUAAAAUUUGUUGGGUGUGCUUU................. len:31 al:1
..............................................UAUUuGGAUUAAAAUUUGUUGGGU........................ len:24 al:3
..............................................UAUUuGGAUUAAAAUUUGUUGGGUGUGC.................... len:28 al:90
..............................................UAUUuGGAUUAAAAUUUGUUGGG......................... len:23 al:1
..............................................UAUUuGGAUUAAAAUUUGUUGGGUGUGCU................... len:29 al:17
...............................................AUUuGGAUUAAAAUUUGUUGGGUGUGC.................... len:27 al:7
...............................................AUUuGGAUUAAAAUUUGUUGGGUGUG..................... len:26 al:2
...............................................AUUuGGAUUAAAAUUUGUUGGGUGU...................... len:25 al:2
...............................................AUUuGGAUUAAAAUUUGUUGGGUGUGCU................... len:28 al:3
................................................UUCGGAUUAAAAUUUGUUGGGUGUGCc................... len:27 al:1
................................................UUuGGAUUAAAAUUUGUUGGGUGUG..................... len:25 al:14
................................................UUuGGAUUAAAAUUUGUUGGGUGUGC.................... len:26 al:173
................................................UUCGGAUUAAAAUUUGUUGGGUGUGCU................... len:27 al:1
................................................UUCGGAUUAAAAUUUGUUGGGUGUGu.................... len:26 al:1
................................................UUuGGAUUAAAAUUUGUUG........................... len:19 al:1
................................................UUCGGAUUAAAAUUUGUUGGGUGUG..................... len:25 al:1
................................................UUuGGAUUAAAAUUUGUUGGGUGU...................... len:24 al:2
................................................UUCGGAUUAAAAUUUGUUGGGUGUGC.................... len:26 al:11
................................................UUuGGAUUAAAAUUUGUUGGGUGUGCU................... len:27 al:32
................................................UUuGGAUUAAAAUUUGUUGGGUG....................... len:23 al:4
................................................UUuGGAUUAAAAUUUGUUGGGU........................ len:22 al:2
.................................................UCGGAUUAAAAUUUGUUGGGUGUGa.................... len:25 al:1
.................................................UuGGAUUAAAAUUUGUUGGGUGUGCU................... len:26 al:34
.................................................UuGGAUUAAAAUUUGUUGGGUGU...................... len:23 al:27
.................................................UCGGAUUAAAAUUUGUUGGGUGUGC.................... len:25 al:8
.................................................cCGGAUUAAAAUUUGUUGGGU........................ len:21 al:1
.................................................UCGGAUUAgAAUUUGUUGGGUGU...................... len:23 al:1
.................................................UCGGAUUAAAAUUUGUUGGGUGUGu.................... len:25 al:2
.................................................UuGGAUUAAAAUUUGUUGGGUGUGC.................... len:25 al:282
.................................................UuGGAUUAAAAUUUGUUGGGUGUG..................... len:24 al:49
.................................................UuGGAUUAAAAUUUGUUGGGUG....................... len:22 al:6
.................................................UuGGAUUAAAAUUUGUUGGGU........................ len:21 al:2
..................................................CGGAUUAAAAUUUGUUGGGUGc...................... len:22 al:1
..................................................uGGAUUAAAAUUUGUUGGGU........................ len:20 al:2
..................................................uGGAUUAAAAUUUGUUGGGUGUGCUU.................. len:26 al:1
..................................................CGGAUUAAAAUUcGUUGGGUGUGC.................... len:24 al:1
..................................................uGGAUUAAAAUUUGUUGGGUGUGCU................... len:25 al:31
..................................................CGGAUUAAAAUUUGUUGGGUGUGC.................... len:24 al:27
..................................................uGGAUUAAAAUUUGUUGGGUGU...................... len:22 al:4
..................................................CGGAUUAAAAUUUGUUGGGUGUGu.................... len:24 al:12
..................................................CGGAUUAAAAUUUGUUGGGUGUGa.................... len:24 al:2
..................................................aGGAUUAAAAUUUGUUGGGUGUGC.................... len:24 al:2
..................................................uGGAUUAAAAUUUGUUGGGUGUGC.................... len:24 al:490
..................................................CGGAUUAAAAUUUGUUGGGUGUGCU................... len:25 al:1
..................................................uGGAUUAAAAUUUGUUGGGUGUG..................... len:23 al:13
..................................................uGGAUUAAAAUUUGUUGGG......................... len:19 al:1
...................................................GGAUUAAAAUUUGUUGGGUaUGC.................... len:23 al:4
...................................................GGAUUAAAAUUUGUUGGGUGU...................... len:21 al:82
...................................................GGAUUAAAAUUUGUUGGGUGUGCcU.................. len:25 al:1
...................................................GcAUUAAAAUUUGUUGGGU........................ len:19 al:1
...................................................GGAUUAAAAUUUGUUGGGcGUGCU................... len:24 al:8
...................................................GGAUUAcAAUUUGUUGGGUGUGCUU.................. len:25 al:1
...................................................GGAUUAgAAUUUGUUGGGUGUGC.................... len:23 al:10
...................................................GGAUUAAAAUUUGUUGGGUGUGg.................... len:23 al:8
...................................................GGAUUAAAAUUUGUUGGGUGaGC.................... len:23 al:2
...................................................GGAUUAAAgUUUGUUGGGUGUG..................... len:22 al:1
...................................................GGAUUAAAAUUUGUUGGGUGUGCUU.................. len:25 al:65
...................................................GGAUUAAAAUUUGUUGGGUGUGCUa.................. len:25 al:53
...................................................GaAUUAAAAUUUGUUGGGUGUGCU................... len:24 al:3
...................................................GGAUcAAAAUUUGUUGGGUGUGC.................... len:23 al:5
...................................................GGAUUAgAAUUUGUUGGGUGUG..................... len:22 al:1
...................................................GGAUUAAAAUUUGUUGGGUGUGCgU.................. len:25 al:1
...................................................GGAUUAAAAUUUaUUGGGUGUGC.................... len:23 al:1
...................................................aGAUUAAAAUUUGUUGGGUGUGCU................... len:24 al:8
...................................................GGAUUAAAAUUUGUUGGGUGUGCg................... len:24 al:22
...................................................GGAUUAAAAUUUGUUGGGUGg...................... len:21 al:2
...................................................GGAUUAAAAUUUGUUGGGUGUa..................... len:22 al:16
...................................................GGAUUAAAAUUUGUUGGGU........................ len:19 al:13
...................................................GGAUUAAAAUUUGcUGGGUGUGC.................... len:23 al:35
...................................................GGAUUAAAcUUUGUUGGGUGUGC.................... len:23 al:15
...................................................GGAUUAAAAUUUGUUGGa......................... len:18 al:1
...................................................GGAUUAAAAUUUGUgGGGUGUGC.................... len:23 al:1
...................................................GGAUUAAAAUUUGUUGGGUGUGCc................... len:24 al:136
...................................................GGAUUAAAAUUUGUUGGGUGUGCUc.................. len:25 al:4
...................................................GGAUUAAAAUUUGUUGGGcGU...................... len:21 al:1
...................................................GGAUUAAAAUUUGUUGGGUGUcC.................... len:23 al:2
...................................................GGAUUAAAAUUUGUUGGaUGUGC.................... len:23 al:12
...................................................GGAUUAAAAUUgGUUGGGUGUGC.................... len:23 al:2
...................................................GGAcUAAAAUUUGUUGGGUGUGC.................... len:23 al:21
...................................................GGAUUAAAAUUUGUUGGu......................... len:18 al:1
...................................................GGAUUAAAAUUUGUUGGGUa....................... len:20 al:1
...................................................GGAUUAAgAUUUGUUGGGUGUGC.................... len:23 al:18
...................................................GGAUUAAAAUUUGUcGGGUG....................... len:20 al:1
...................................................GGAUUAAAAUUUGUUGGaU........................ len:19 al:1
...................................................GGAUUAAAAUUUGUUGGGUGUGCUaUA................ len:27 al:1
...................................................GGAUUAAAAUcUGUUGGGUGUGCU................... len:24 al:1
...................................................GGAUUAAAAUUUGUUGGGUGUGCaU.................. len:25 al:19
...................................................GGAUUAAAgUUUGUUGGGUGUGC.................... len:23 al:24
...................................................GGAcUAAAAUUUGUUGGGUGUGCU................... len:24 al:2
...................................................GGAUUAAAAUUUGUUGGGUGUGCUUUu................ len:27 al:1
...................................................GGAUUAAAAUUUGUaGGGUGUGC.................... len:23 al:4
...................................................GGAUUAAAAUUUGUUGGGUGcGCU................... len:24 al:2
...................................................GGAUUAAAAUUUGUUGGGcGUGCUU.................. len:25 al:2
...................................................uGAUUAAAAUUUGUUGGGUGUGC.................... len:23 al:3
...................................................GGAUUAAAAUUUGUUGGGUGUc..................... len:22 al:5
...................................................GGAUUAAAAUUUGUUGGcUGUGC.................... len:23 al:1
...................................................GGAUUAAAAUUUGUUGGGUGUGCUUUAuAU............. len:30 al:1
...................................................GGAUUAAAAUUUGUUGGGUGUGCaUU................. len:26 al:6
...................................................GGAUUAAAAUUUGUUGGGUGUaC.................... len:23 al:73
...................................................GGAUUAAAcUUUGUUGGGUGUGCUU.................. len:25 al:1
...................................................GGAUUAcAAUUUGUUGGGUGUGC.................... len:23 al:7
...................................................GGAUUAAAAUUUGUUaGGUGUGC.................... len:23 al:8
...................................................GGAUUgAAAUUUGUUGGGUGUGC.................... len:23 al:10
...................................................GGAUUAAAAUUUGUUGGGUGUGa.................... len:23 al:267
...................................................GGAUUAAAAUUUGUUGGGcG....................... len:20 al:1
...................................................GGAUUAAAAUUUGUUGGGUGgGC.................... len:23 al:3
...................................................GGAUUAAAgUUUGUUGGGUGUGCU................... len:24 al:2
...................................................GGAUUAAAAUUUGUUGGGUGUGCa................... len:24 al:994
...................................................GGAUUAAAAUUUGUUGGGUGUG..................... len:22 al:183
...................................................GGAUUAAAAUUUGUUGGGa........................ len:19 al:6
...................................................GGAUUAAAAUUUGUUGGGUGUGCUUc................. len:26 al:2
...................................................GGAUUAAAAUUUGUUGGGUGUuC.................... len:23 al:3
...................................................GGAUUAAAAUUUGUUGGGUGUGu.................... len:23 al:1997
...................................................GGAUUAAgAUUUGUUGGGUGUGCU................... len:24 al:4
...................................................GGAUUAAAAUUUGUUGGGUGUGCU................... len:24 al:1399
...................................................GGgUUAAAAUUUGUUGGGUGUGC.................... len:23 al:24
...................................................GGAUUAAAAUUcGUUGGGUGUGC.................... len:23 al:13
...................................................GGgUUAAAAUUUGUUGGGUGUGCU................... len:24 al:1
...................................................GGAUUAAAAUUcGUUGGGU........................ len:19 al:1
...................................................GGAUUAAAAUUUGUUGGGUu....................... len:20 al:1
...................................................GGAUUAAAcUUUGUUGGGUGUGCU................... len:24 al:1
...................................................GGAUUAAAcUUUGUUGGGUGU...................... len:21 al:1
...................................................GGAUUAAgAUUUGUUGGGUG....................... len:20 al:1
...................................................aGAUUAAAAUUUGUUGGGUGUGC.................... len:23 al:72
...................................................GGAUUAAAAUUUGUUGGGUaUG..................... len:22 al:1
...................................................GGAUUAAAAcUUGUUGGGUGUGC.................... len:23 al:9
...................................................GGAUUAAAAUUUGUUGGGUGcGC.................... len:23 al:30
...................................................GGAUgAAAAUUUGUUGGGUGUGC.................... len:23 al:1
...................................................aGAUUAAAAUUUGUUGGGUGUGCUUU................. len:26 al:1
...................................................GGAUUAAAAUUUGUUGGGUGcG..................... len:22 al:1
...................................................GGcUUAAAAUUUGUUGGGUGUGC.................... len:23 al:5
...................................................GGAUUAAAAUUUGcUGGGUGUGCU................... len:24 al:4
...................................................GGAUUAAAAUUUGUUGGGcGUGC.................... len:23 al:18
...................................................GGAUUAAAAUUcGUUGGGUGUG..................... len:22 al:1
...................................................GGAUcAAAAUUUGUUGGGUGUGCU................... len:24 al:1
...................................................GGAUUAAAAUUUGgUGGGUGUGC.................... len:23 al:1
...................................................GGAUUAgAAUUUGUUGGGUGUGCU................... len:24 al:4
...................................................GGAUUAAAAUUUGUUGGGUGUGCUg.................. len:25 al:2
...................................................GGAUUAAAAUUUGaUGGGUGUGC.................... len:23 al:2
...................................................GGAUUAgAAUUUGUUGGGUG....................... len:20 al:1
...................................................GGAUUAAAAUUUGUUGGGUGa...................... len:21 al:1
...................................................GGAUUAAcAUUUGUUGGGUGUGCU................... len:24 al:1
...................................................GGAUUAAAAUUUGUUGGG......................... len:18 al:3
...................................................GGAUUAgAAUUUGUUGGGUGUGCUUU................. len:26 al:1
...................................................GGAUUAAAAUUUGUUGGGUGUGCUUa................. len:26 al:3
...................................................GcAUUAAAAUUUGUUGGGUGUGC.................... len:23 al:4
...................................................GGAUUAAAAUUUGUUGGGc........................ len:19 al:1
...................................................GGAUUAAAAUUUGUUGGGUGUGuU................... len:24 al:2
...................................................GGAUUAAAAUUUGUUGaGUGUGC.................... len:23 al:8
...................................................GGAUUAAAAUUUGUUGGGUGUGCUgU................. len:26 al:1
...................................................GGAUUAAAAUUUGUUGGGUaU...................... len:21 al:1
...................................................GGAUUAAAAUUUGUUGGGUcUGC.................... len:23 al:1
...................................................GGAUUAAAAUUUGUUGGGgGUGC.................... len:23 al:1
...................................................GGAUUAAAAUUUGUUGGGUGUu..................... len:22 al:3
...................................................GGAUUAAAAUUUGUUGGGUGUGCUUU................. len:26 al:30
...................................................GGAUUAAAAUUUGUUGGGUGUaCU................... len:24 al:1
...................................................GGAUUAAAAUUUGUUGaGUGUGCU................... len:24 al:2
...................................................GGAUUAAAAUUUGUUGuGUGU...................... len:21 al:1
...................................................GGAUUAAAAUUUGUUGGGUGUGCUaU................. len:26 al:14
...................................................GGAUcAAAAUUUGUUGGGUGUG..................... len:22 al:2
...................................................GGAUUAAAAUUUGUUuGGUGUGC.................... len:23 al:4
...................................................GGAUUAAAAUcUGUUGGGUGUGC.................... len:23 al:3
...................................................cGAUUAAAAUUUGUUGGGUGUGC.................... len:23 al:1
...................................................GGAUUAAAAUUUGUUGuGUGUGC.................... len:23 al:1
...................................................GGAUUAAAAUUUGUUGGaUGUGCU................... len:24 al:2
...................................................GGAUUAAAAUUUGUUGGGUGUGC.................... len:23 al:11524
...................................................GGAUUcAAAUUUGUUGGGUGUGC.................... len:23 al:9
...................................................GaAUUAAAAUUUGUUGGGUGUGC.................... len:23 al:10
...................................................GGAUUAAAAUUUGcUGGGUGUG..................... len:22 al:1
...................................................GGAUUAAcAUUUGUUGGGUGUGC.................... len:23 al:12
...................................................GGAUgAAAAUUUGUUGGGUGUG..................... len:22 al:1
...................................................GGAUaAAAAUUUGUUGGGUGUGC.................... len:23 al:1
...................................................GGAUUAAAAUUUGUUGGGUGc...................... len:21 al:11
...................................................GGAUUAAAAUUUGUUGGGUG....................... len:20 al:26
...................................................GGAUUAAAAUUUGUcGGGUGUGC.................... len:23 al:25
...................................................GGAUUAAAAUUUGUUGGGUGUGaU................... len:24 al:13
....................................................GAUUAAAAcUUGUUGGGUGUGC.................... len:22 al:1
....................................................GAUUAAAAUUUGUUGGGUGUGa.................... len:22 al:2
....................................................GAUUAAAAUUUGUUGGGUGUGuU................... len:23 al:1
....................................................GAUUgAAAUUUGUUGGGUGUGC.................... len:22 al:2
....................................................GAUUAAAAUUUGUUGGGUGUGg.................... len:22 al:1
....................................................GAUUAAAAUUUGUUGGGUGUGCc................... len:23 al:6
....................................................GAUUAAAAUUUGUUGGGUGUGCU................... len:23 al:32
....................................................GAUUAAAAUUUGUUGGGUGUG..................... len:21 al:1
....................................................GAUUAAAAUUUGUUGGGUGUGC.................... len:22 al:122
....................................................GAUUAAAAUUUGUUGaGUGUGC.................... len:22 al:1
....................................................GAUUAAAAUUUGUUGGGUGUaC.................... len:22 al:1
....................................................GAUUAAAAUUUGUUGGGUGUGCa................... len:23 al:14
....................................................GAUUAAAAUUUGUUGGGUGU...................... len:20 al:1
....................................................GAUUAAAAUUUGUUGGGUGUGu.................... len:22 al:18
.....................................................AUUgAAAUUUGUUGGGUGUGC.................... len:21 al:1
.....................................................AUUAAAAUUUGUUGGGU........................ len:17 al:1
.....................................................AcUAAAAUUUGUUGGGUGUGC.................... len:21 al:2
.....................................................AUUAAAAUUUGUcGGGUGUGC.................... len:21 al:2
.....................................................AUUAAAAcUUGUUGGGUGUGC.................... len:21 al:1
.....................................................gUUAAAAUUUGUUGGGUGUGC.................... len:21 al:4
.....................................................AUUAAAAUUUGcUGGGUGUGCU................... len:22 al:1
.....................................................AUUAAAAUUUGUUGGGUGUGCa................... len:22 al:4
.....................................................AUUAAAAUUUGUUGGGcGUGC.................... len:21 al:4
.....................................................AUUAAAAUUUGUUGGaUGUGC.................... len:21 al:1
.....................................................AUUAAAAUcUGUUGGGUGUGC.................... len:21 al:1
.....................................................AUUAAAAUcUGUUGGGUGUGCU................... len:22 al:1
.....................................................AUUAAAAUUcGUUGGGUGUGCUUU................. len:24 al:1
.....................................................AUUAAAAUUUGUUGGGUuUGC.................... len:21 al:1
.....................................................cUUAAAAUUUGUUGGGUGUGC.................... len:21 al:1
.....................................................AUUAAAAUUUGUUGGGUGUa..................... len:20 al:1
.....................................................AUUAAAgUUUGUUGGGUGUGC.................... len:21 al:3
.....................................................AUUAAAAUUUGUUGGGUGUGCU................... len:22 al:28
.....................................................AUUAAgAUUUGUUGGGUGUGC.................... len:21 al:2
.....................................................AUUAAAAUUUGUUGGGUGUGa.................... len:21 al:22
.....................................................AUUAAcAUUUGUUGGGUGUGC.................... len:21 al:3
.....................................................AUUAAAAUUUGUUGGGUaUGC.................... len:21 al:1
.....................................................AUUAAAAUUUGUUGGGUGUGuU................... len:22 al:1
.....................................................AUUAAAAUUUGUUGGGUGU...................... len:19 al:3
.....................................................AUUAAAAUUUGUUGGGUGc...................... len:19 al:1
.....................................................AUUAAAAUUUGUUGGGUGUGCUUU................. len:24 al:2
.....................................................AUUAAAAUUUGUUGGGUGUGCUaU................. len:24 al:1
.....................................................AUUAAAAUUUGcUGGGUGUGC.................... len:21 al:2
.....................................................AUUAAAAUUUGUUGGGUGUGC.................... len:21 al:646
.....................................................AUUAAAAUUUGUUGGGUGUGCUU.................. len:23 al:1
.....................................................AUUAAAAUUUGUUGGGUGUG..................... len:20 al:5
.....................................................AUUAAAAUUUGUUGGGUGUaC.................... len:21 al:5
.....................................................AUUAAAAUUUGUUGGGUGUGu.................... len:21 al:111
......................................................UUAAAAUUUGUUGGGUGUGuU................... len:21 al:2
......................................................UUAAAAUUUGUUGGGUGUGCUUU................. len:23 al:4
......................................................UUAAAAUUUGUUaGGUGUGC.................... len:20 al:1
......................................................UUgAAAUUUGUUGGGUGUGC.................... len:20 al:1
......................................................UUAAAAUUUGUUGGGUGUGCUU.................. len:22 al:3
......................................................UUAAAAUUUGUUGGGUGUGC.................... len:20 al:1671
......................................................UUAAAgUUUGUUGGGUGUGC.................... len:20 al:4
......................................................UUAAAAUUUGUUGGGUGUGa.................... len:20 al:27
......................................................UUAAAAUUUGUUGGGUGUGCa................... len:21 al:103
......................................................UUAAAAUUUGUUGGGUGUGCU................... len:21 al:107
......................................................UUAAAAUUUGcUGGGUGUGCU................... len:21 al:1
......................................................UUAAAAUcUGUUGGGUGUGC.................... len:20 al:3
......................................................UUAAAAUUUGUUGGGcGUGC.................... len:20 al:3
......................................................UUAAAAUUUGUUGGGUGU...................... len:18 al:6
......................................................UcAAAAUUUGUUGGGUGUGC.................... len:20 al:2
......................................................UUAAAAUUUGcUGGGUGUGC.................... len:20 al:5
......................................................UUAAAAUUUGUUGGGUGUGaU................... len:21 al:2
......................................................UUAAcAUUUGUUGGGUGUGC.................... len:20 al:3
......................................................UUAAAAcUUGUUGGGUGUGC.................... len:20 al:2
......................................................UUAAAAUUUGUUGGGUGUGCaU.................. len:22 al:6
......................................................UUAAAAUUcGUUGGGUGUGC.................... len:20 al:3
......................................................UUAAAcUUUGUUGGGUGUGC.................... len:20 al:3
......................................................UUAAAAUUUGUUGGGUGUGCaUU................. len:23 al:1
......................................................cUAAAAUUUGUUGGGUGUGC.................... len:20 al:3
......................................................UUAAAAUUUGUcGGGUGUGC.................... len:20 al:1
......................................................UUAAAAUUUGUUGGGUGUG..................... len:19 al:10
......................................................UUAAAAUUUGUUGGGUGUGuUU.................. len:22 al:1
......................................................UUAAAAUUUGUUGaGUGUGC.................... len:20 al:2
......................................................UUAAAAUUUGUUGGGUGUGCc................... len:21 al:15
......................................................UUAAAAUUUGUUGGGUGgGC.................... len:20 al:1
......................................................UUcAAAUUUGUUGGGUGUGC.................... len:20 al:1
......................................................UUAAAAUUUGUUGGGUGcGCU................... len:21 al:1
......................................................UUAAAAUUUGUUGGGUGUGu.................... len:20 al:279
......................................................UUAAAAUUUGUUGGGUGUGCg................... len:21 al:1
......................................................UUAAAAUUUGUUGGGUGcGC.................... len:20 al:3
......................................................UUAAAAUUUGUUGGuUGUGC.................... len:20 al:1
......................................................UUAAAAUUUGUUGGGUGc...................... len:18 al:1
......................................................UUAAAAUUUGUUGGGU........................ len:16 al:1
......................................................UUAAAAUUUGUUGGGUGUGg.................... len:20 al:2
......................................................UUAAAAUUUGUUGGGUGUa..................... len:19 al:1
......................................................UUAAAAUUUGUUGGGUGUGCUa.................. len:22 al:4
......................................................UUAcAAUUUGUUGGGUGUGC.................... len:20 al:4
......................................................UUAAAcUUUGUUGGGUGUG..................... len:19 al:1
......................................................UUAAAAUUUGUUGGGUGUaC.................... len:20 al:9
.......................................................UAAAAUUUGUUGGGUGUGCUa.................. len:21 al:1
.......................................................UAAAAUUUGUUGGGUGUGaU................... len:20 al:1
.......................................................UAAAAUUUGUUGGGUGUGCU................... len:20 al:29
.......................................................UAAAAUUUGUUGGGUGUGCUU.................. len:21 al:8
.......................................................UAAAAUUUGUUGGaUGUGCUUU................. len:22 al:1
.......................................................UAAAAUUUGUUGGGUGUGCUaU................. len:22 al:1
.......................................................UAAAAUUUGUUGGGUGUG..................... len:18 al:1
.......................................................UAAAAUUUGUUGGGUGUGCaU.................. len:21 al:1
.......................................................UAAAAUUUGUcGGGUGUGC.................... len:19 al:1
.......................................................UAAAAUUUGUUGGGUGUGCUUU................. len:22 al:1
.......................................................UAAAAUUUGUUGGGUGUGu.................... len:19 al:6
.......................................................UAAAAUUUGUUGGGUGUGCa................... len:20 al:14
.......................................................UAAAAUUUGUUGGGUGUGC.................... len:19 al:33
.......................................................UAAAAUUUGUUGGGUGUGCUc.................. len:21 al:1
........................................................AAAcUUUGUUGGGUGUGC.................... len:18 al:1
........................................................AAAAUUUGUUGGGUGUGCU................... len:19 al:6
........................................................AAAAUUUGUUGGGUGUGu.................... len:18 al:3
........................................................AAAAUUUGUUGGGUGUGa.................... len:18 al:1
........................................................AAAAUUUGUUGGGUGUGC.................... len:18 al:21
.........................................................AAAUUUGUUGGGUGUGCU................... len:18 al:1
.........................................................AAAUUUGUUGGGUGUGCUU.................. len:19 al:1
.........................................................AAAUUUGUUGGGUGUGCUUU................. len:20 al:3
..........................................................AAUUUGUUGGGUGUGC.................... len:16 al:4
..........................................................AAUUUGUUGGGUGUGCUUUu................ len:20 al:1
...........................................................AUUUGUUGGGUGUGCUUU................. len:18 al:2
...........................................................AUUUGUUGGGUGUGCU................... len:16 al:1
...................................................................GGUGUGCUUUAgAUG............ len:15 al:3