Genome: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/F-Ptua/data/Pocillopora_meandrina_HIv1.assembly.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/F-Ptua/output/04-Ptua-sRNA-discovery-ShortStack/ShortStack_out/merged_alignments.bam
Location: Pocillopora_meandrina_HIv1___Sc0000016:7549557-7549654 plus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/F-Ptua/output/04-Ptua-sRNA-discovery-ShortStack/ShortStack_out/strucVis/Cluster_4485.ps.pdf
Locus Name: Cluster_4485
AGGGAAAACAUUGUCUAGCAUAUGGUGAGCUGUUUGAACUUUUACUAUUUAUGAUAUCAGUUCCACCAGCUCACCAAUAGGCCAGAUGAUAACAUGCA
.........(((((((.((.((((((((((((...(((((..(((.......).))..)))))...))))))))).))).)).)))))))........ (-29.40)
.........AUUGUCUAGCAUAUGGUGAGCU................................................................... len:22 al:1
................AGCAUAUGGUGAGCUGUUUGAACUUUU....................................................... len:27 al:2
................AGCAUAUGGUGAGCUGUUUG.............................................................. len:20 al:1
................AGCAUAUGGUGAGCUaUUUGAACU.......................................................... len:24 al:2
.................GCAUAUGGUGAGCUGUUUGAACc.......................................................... len:23 al:1
....................UAUGGUGAGCUGUUUGAACc.......................................................... len:20 al:2
....................UAUGGUGAGCUGUUUGAAC........................................................... len:19 al:1
....................UAUGGUGAGCUGUUUGAACUc......................................................... len:21 al:1
....................UAUGGUGAGCUGUUUGAAu........................................................... len:19 al:1
....................UgUGGUGAGCUGUUUGAACUUU........................................................ len:22 al:1
....................UAUGGUGAGCUGUUUGAACUUgU....................................................... len:23 al:1
....................UAUGGUGAGCUGUUUGAACU.......................................................... len:20 al:34
....................UAUGGUGAGCUGUUUGAACUU......................................................... len:21 al:8
....................UAUGGUGAGCUGUUUGAACUaU........................................................ len:22 al:1
....................UAUGGUGAGCUGUUUGAA............................................................ len:18 al:1
.....................AUGGUGAGCUGUUUGAACU.......................................................... len:19 al:5
.....................AUGGUGAuCUGUUUGAACU.......................................................... len:19 al:1
.....................gUGGUGAGCUGUUUGAACUUU........................................................ len:21 al:1
......................UGGUGAGCUGUUUaAACUUUUA...................................................... len:22 al:3
......................UGGUGAGCUGUUUGAACUc......................................................... len:19 al:5
......................UGGUGgGCUGUUUGAACUUUUA...................................................... len:22 al:6
......................cGGUGAGCUGUUUGAACUUUUA...................................................... len:22 al:6
......................UGGUGAuCUGUUUGAACUUUUA...................................................... len:22 al:1
......................UGGUGAGCUaUUUGAACUUUUA...................................................... len:22 al:1618
......................UGGUGAGCcGUUUGAACUUUU....................................................... len:21 al:2
......................UGuUGAGCUGUUUGAACUUUUA...................................................... len:22 al:1
......................UGGUGAGCUGUUUGAgCUUUUA...................................................... len:22 al:5
......................UGGUGAGCUGUUUGAACUUUUAuUA................................................... len:25 al:1
......................UGGUGAGCUGUUUGAACcUUUA...................................................... len:22 al:9
......................UGGUaAGCUGUUUGAACUUUUA...................................................... len:22 al:2
......................UGGUGAGCUaUUUGAACUUUUAC..................................................... len:23 al:1
......................UGGUGAGCUGUUUGAACUUUUACc.................................................... len:24 al:1
......................UGGUGAGCUaUUUGAACUUU........................................................ len:20 al:12
......................UGGUGAGCUGUUUGAACUUUc....................................................... len:21 al:4
......................UGGUGAGCUGUUUGAACaU......................................................... len:19 al:1
......................aGGUGAGCUGUUUGAACUUUUA...................................................... len:22 al:4
......................gGGUGAGCUGUUUGAACUUUUA...................................................... len:22 al:2
......................UGGUGAGCUGUUUGAACUcUUA...................................................... len:22 al:5
......................UGGUGAGCUGUUUGAACgU......................................................... len:19 al:2
......................UGGUGAGCUGUUUGAACUUUUACUAUUUu............................................... len:29 al:1
......................UGGUGAGCUGUUUGAACUUUUAu..................................................... len:23 al:31
......................UGGUGAGCUGUUUGAACUUUUu...................................................... len:22 al:2
......................UGGUGAGCUGUUUGAACUUcU....................................................... len:21 al:1
......................UGGUGAGCUGUUUGAACUUUUACUAUU................................................. len:27 al:4
......................UGGUGAGCUaUUUGAACUUUU....................................................... len:21 al:156
......................UGGUGAGCcGUUUGAACU.......................................................... len:18 al:1
......................UGGUGgGCUGUUUGAACUUUU....................................................... len:21 al:1
......................UGGUGAGCUGUUgGAACUUUUA...................................................... len:22 al:1
......................UGGUGAGCUGUUcGAACUUUUA...................................................... len:22 al:10
......................UGGUGAGCUGUUUGcACUUUUA...................................................... len:22 al:3
......................UGGUGcGCUGUUUGAACUUUUA...................................................... len:22 al:1
......................UGGUGAGCUGUUUGAACa.......................................................... len:18 al:5
......................UGGUGAGuUGUUUGAACUUUUA...................................................... len:22 al:3
......................UGGUGAGCUGUUUGAACU.......................................................... len:18 al:144
......................UGGUGAGCUGUUUGAACUUUUg...................................................... len:22 al:4
......................UGGUGAGCUaUUUGAACU.......................................................... len:18 al:25
......................UGGUGAGCUGUUUGAACUUUUAaU.................................................... len:24 al:5
......................UGGUGgGCUGUUUGAACU.......................................................... len:18 al:1
......................UGGUGAGCUGUUUGAACUUUUAuU.................................................... len:24 al:24
......................UaGUGAGCUGUUUGAACU.......................................................... len:18 al:1
......................UGGUGAGCUGUUUGA............................................................. len:15 al:2
......................UGGUGAGCUGUUUGAACUUU........................................................ len:20 al:35
......................UGaUGAGCUGUUUGAACUUUUA...................................................... len:22 al:2
......................UGGUGAGCUGUUUGAAuU.......................................................... len:18 al:1
......................UGGUGAGCUGUUUGAACUUUUA...................................................... len:22 al:2195
......................UGGUGAGCUGUUUGAACUUUUACUAUUUAUG............................................. len:31 al:3
......................UGGUGAGCUGUcUGAACUUUUA...................................................... len:22 al:3
......................UGGUGAGCUGUUUGAcCUUUUA...................................................... len:22 al:1
......................UGGUGAGCcGUUUGAACUUUUA...................................................... len:22 al:4
......................UGGUGAGCUGUUUGAACUUUUAC..................................................... len:23 al:19
......................UGGUGgGCUGUUUGAACUU......................................................... len:19 al:2
......................UGGUGAGCUGUUUGAACUUcUA...................................................... len:22 al:6
......................UGGUGAGCUGUUUGAACUUUU....................................................... len:21 al:225
......................UGGaGAGCUGUUUGAACUUUUA...................................................... len:22 al:1
......................UGGUGAGCUGUUUGAAuUU......................................................... len:19 al:1
......................UGGUGAGCUGUUcGAACUUUU....................................................... len:21 al:2
......................UGGcGAGCUGUUUGAACUUUUA...................................................... len:22 al:2
......................UGGUGAGCUGUUUGAACUUUUAaUA................................................... len:25 al:7
......................UGGUGAGCUaUUUGAACUUUUACUA................................................... len:25 al:2
......................UGGUGAGCUGUUUGAACUUUUAa..................................................... len:23 al:1
......................UGGUuAGCUGUUUGAACUUUUA...................................................... len:22 al:1
......................UGGUGAGCUGUcUGAACUUUUAC..................................................... len:23 al:1
......................UGGUGAGCUcUUUGAACUUUUA...................................................... len:22 al:2
......................UGGUGAGCUGUUUGAACUUUUACU.................................................... len:24 al:9
......................UGGUGAGCUGUUUGAACc.......................................................... len:18 al:16
......................UGGUGAGCUGUUUGAACUaU........................................................ len:20 al:2
......................UGGUGAGCUaUUUGAACUUUUACU.................................................... len:24 al:4
......................UGGUGAGCUGcUUGAACUUUUA...................................................... len:22 al:5
......................UGGUGAGCUaUUUGAACUU......................................................... len:19 al:12
......................UGGUGAGCUGUUUGAACUUgU....................................................... len:21 al:3
......................UGGUGAGCgGUUUGAACU.......................................................... len:18 al:1
......................UGGUGAGCUGUUUGAACUUUcA...................................................... len:22 al:2
......................UGGUGAGCUGUUUGAACUU......................................................... len:19 al:50
......................UGGUGAGCUGUcUGAACUUUU....................................................... len:21 al:1
......................UGGUGAGCUGUUUGgACUUUUA...................................................... len:22 al:1
.......................GGUGAGCUaUUUGAACUUUUA...................................................... len:21 al:213
.......................GGUGgGCUGUUUGAACUU......................................................... len:18 al:23
.......................GGUGAGCUGUUUGAACUUUUg...................................................... len:21 al:1
.......................GGUGAGCUGUUcGAACUUUUA...................................................... len:21 al:3
.......................GGUGgGCUGUUUGAACUUUUA...................................................... len:21 al:5
.......................GGUGAGCUGUUUGAACU.......................................................... len:17 al:76
.......................GGUGAGCUGUUUGAACUUaUAC..................................................... len:22 al:9
.......................GGUGAGCUGcUUGAACUUUUA...................................................... len:21 al:1
.......................GGUGAGCUGcUUGAACUUU........................................................ len:19 al:1
.......................GGUGAGCUGUUUGAACUUcUA...................................................... len:21 al:9
.......................GGaGAGCUGUUUGAACUU......................................................... len:18 al:1
.......................GGUGAGCcGUUUGAACUU......................................................... len:18 al:2
.......................GGUGAGCUGUUUGAACUUg........................................................ len:19 al:1
.......................GGUGAGCUGUUUGAACUUUU....................................................... len:20 al:64
.......................GGUGAGCUaUUUGAACU.......................................................... len:17 al:1
.......................GGUGAGCUGUUUGAACUUUUAuU.................................................... len:23 al:4
.......................GaUGAGCUGUUUGAACUUUU....................................................... len:20 al:1
.......................GGUGAGCUGUUUGAACUUgUA...................................................... len:21 al:12
.......................GGUGAGCUaUUUGAACUU......................................................... len:18 al:1
.......................GGUGAGCUGUUUGAACUUc........................................................ len:19 al:4
.......................GGUGAGCUGUUUGAACUUUUAaUA................................................... len:24 al:4
.......................GGUGAGCUGUUUGAACUUcUAC..................................................... len:22 al:1
.......................aGUGAGCUGUUUGAACUUU........................................................ len:19 al:2
.......................GGUGAGCcGUUUGAACU.......................................................... len:17 al:1
.......................GGUGAGCUGUUUGAACUUUUACU.................................................... len:23 al:3
.......................GGUGAGCUGUUUGAACUg......................................................... len:18 al:3
.......................GGUGAGCUGUUUGAACUU......................................................... len:18 al:449
.......................GGaGAGCUGUUUGAACUUUUA...................................................... len:21 al:1
.......................GGUGAGCUGUUUGAACUa......................................................... len:18 al:16
.......................GGUGAGCUGUUUGAACUUUUAuUA................................................... len:24 al:1
.......................GGUGAGCUGUUUGAACUUUUAC..................................................... len:22 al:2
.......................GaUGAGCUGUUUGAACUU......................................................... len:18 al:2
.......................GGUGgGCUGUUUGAACUUUU....................................................... len:20 al:1
.......................GGUGAGCUGUUUGAACcUUUA...................................................... len:21 al:4
.......................GGUGAGCUGUUUGAA............................................................ len:15 al:5
.......................GGUGAGCUGUUUGAACUUUUACUAUUU................................................ len:27 al:1
.......................GGUGAGCUGUUUGAACa.......................................................... len:17 al:4
.......................GGUGAaCUGUUUGAACUUUUA...................................................... len:21 al:1
.......................GGUGAGCUGUUUGAACgU......................................................... len:18 al:2
.......................GGUGAGCUGUUUGAACUUUUAu..................................................... len:22 al:9
.......................GGUGAGCUaUUUGAACUUUU....................................................... len:20 al:22
.......................GGcGAGCUGUUUGAACUUUUA...................................................... len:21 al:1
.......................GGUGAGCUGUUUGAACUcU........................................................ len:19 al:1
.......................aGUGAGCUGUUUGAACUUUUA...................................................... len:21 al:6
.......................GGUGAGCUGUUUGAACUUUUA...................................................... len:21 al:616
.......................GGUGcGCUGUUUGAACU.......................................................... len:17 al:1
.......................GGUGAGCUGUUUGAACUUgU....................................................... len:20 al:38
.......................aGUGAGCUGUUUGAACUU......................................................... len:18 al:7
.......................GGUGAGCgGUUUGAACUU......................................................... len:18 al:1
.......................aGUGAGCUGUUUGAACUUUU....................................................... len:20 al:1
.......................GGUGAGCUGUUUGAACUUUUu...................................................... len:21 al:2
.......................GGUGAGCUGUUUGAACUUU........................................................ len:19 al:67
.......................GGUGgGCUGUUUGAACUUU........................................................ len:19 al:15
.......................GGUGAaCUGUUUGAACUU......................................................... len:18 al:1
.......................GGUGAGCUGUUUGAACUUUUACUAUU................................................. len:26 al:1
.......................GGUGAGCUGUUUGAgCUU......................................................... len:18 al:1
.......................GGUGAGCUGUUUGAACUaU........................................................ len:19 al:3
.......................GGUGAGCUGUcUGAACUUUUA...................................................... len:21 al:3
.......................GGUGAGCUGUUUGAAC........................................................... len:16 al:2
.......................GGUGcGCUGUUUGAACUUUUA...................................................... len:21 al:2
.......................GGUaAGCUGUUUGAACU.......................................................... len:17 al:1
.......................GGUGAGCUGUUUGAACUc......................................................... len:18 al:23
.......................GGUGAGCUGUUcGAACUU......................................................... len:18 al:2
.......................GGUGAGCUGUUUGAACUUUa....................................................... len:20 al:1
.......................GGUGAGCUGUUUGcACUUUU....................................................... len:20 al:1
.......................GGUGAGCUGUUUGAACaU......................................................... len:18 al:11
........................GUGAGCUGUUUGAACUUUUA...................................................... len:20 al:1
........................GUGAGCUGUUUGAAC........................................................... len:15 al:1
........................GUGAGCUGUUUGAACUUUUAu..................................................... len:21 al:2
........................GUGAGCUGUUUGAACUUU........................................................ len:18 al:1
.........................UGAGCUGUUUGAACUUUUACUAU.................................................. len:23 al:1
.........................UGAGCUGUUUGAACUUUUA...................................................... len:19 al:2
.........................UGAGCUGUUUGAACUUUUACUA................................................... len:22 al:2
.........................UGAGCUGUUUGAACUUUUAu..................................................... len:20 al:1
............................GCUGUUUGAACUUUUACUAUUUAUGAUA.......................................... len:28 al:2
...........................................ACUAUUUAUGAUAUCAGUUCCACCA.............................. len:25 al:1
............................................CUAUUUAcGAUAUCAGUUCCACC............................... len:23 al:1
............................................CUAUUUAcGAUAUCAGUUCCACCAGCUCA......................... len:29 al:4
............................................CUAUUUAcGAUAUCAGUUCCACCAGCUCAC........................ len:30 al:3
............................................CUAUUUAcGAUAUCAGUUCCACCAGCU........................... len:27 al:6
............................................CUAUUUAUGAUAUCAGUUCCACCAGCUCACC....................... len:31 al:5
............................................CUAUUUAUGAUAUCAGUUCCACCAGCUCA......................... len:29 al:1
............................................CUAUUUAUGAUAUCAGUUCCACCAGCU........................... len:27 al:1
............................................CUAUUUAcGAUAUCAGUUCCACCAGCUCACC....................... len:31 al:4
.............................................UAUUUAcGAUAUCAGUUCCACCAGCUCACC....................... len:30 al:1
.............................................UcUUUAUGAUAUCAGUUCCACCAGCUCACCA...................... len:31 al:1
.............................................UAUUUAcGAUAUCAGUUCCACC............................... len:22 al:1
...............................................UUUAUGAUAUCAGUUCCACCAGCUCACCAAU.................... len:31 al:1
................................................UUAUGAUAUCAGUUCCACCAGCUCACCAAUA................... len:31 al:1
.................................................UAUGAUgUCAGUUCCACCAGCUCACCAAUA................... len:30 al:1
.................................................UAUGAUAUCAGUUCCACCAGCUCACCAAU.................... len:29 al:2
..................................................AUGAUAUCAGUUCCACCAGCUCACCAAU.................... len:28 al:1
..................................................AUGAUAUCAGUUCCACCAGCUCACCAAUA................... len:29 al:3
..................................................AUGAUAUCAGUUCCACCAGCUCAC........................ len:24 al:1
...................................................UGAUAUCAGUUCCACCAGCUCACCAAU.................... len:27 al:1
...................................................UGAUAUCAGUUCCACCAGCUCACCAAUA................... len:28 al:1
....................................................GAUAUCAGUUCCACCAGCUCACCAAU.................... len:26 al:2
....................................................GAUAUCAGUUCCACCAGCUCACCAAUA................... len:27 al:2
......................................................UAUCAGUUCCACCAGCUCACCA...................... len:22 al:3
......................................................UAUCAGUUCCACCAGCUCACCAAUA................... len:25 al:1
......................................................UAUCAGUUCCACCAGCUCACC....................... len:21 al:1
......................................................UAUCAGUUCCACCAGCUCAgC....................... len:21 al:1
......................................................UAUCAGUUCCACCAGCUCAgCA...................... len:22 al:1
.......................................................AUCAGUUCCACCAGCUCACCAAU.................... len:23 al:5
.......................................................cUCAGUUCCACCAGCUCACCAAU.................... len:23 al:6
.......................................................AaCAGUUCCACCAGCUCACCAAUA................... len:24 al:1
.......................................................AUCAGUUCCACCAGCUCACCAgU.................... len:23 al:1
.......................................................cUCAGUUCCACCAGCUCACCAAUA................... len:24 al:5
.......................................................AUCAGUUCCACCAGCUCACCAAUA................... len:24 al:6
........................................................UCAGUUCCACCAuCUCACCAAU.................... len:22 al:771
........................................................UCAGUUCCACCAGCUCACCAAUg................... len:23 al:57
........................................................UCAGUUCCACCAGCUCACg....................... len:19 al:4
........................................................UCAGUUCCACCAGCaCACCAAUA................... len:23 al:9
........................................................UCAGUUCCgCCAGCUCACCAA..................... len:21 al:7
........................................................UCAGUUCCACCAGCUCAaCAAU.................... len:22 al:3
........................................................UCAGUUCCACCAGCUCACCAAUA................... len:23 al:15260
........................................................UCAGUUCCACCAaCUCACCAAUA................... len:23 al:20
........................................................UCAGUUCCACCAGCgCACCAAUA................... len:23 al:3
........................................................UCAGUUCCACCAGCUCAgCAAUA................... len:23 al:9
........................................................UCAGUUCCACCAGCUuACCAAU.................... len:22 al:16
........................................................UCAGUUCCACCAGCUCACCAAUAGc................. len:25 al:1
........................................................UCAGUUCCACCAGCgCACCA...................... len:20 al:1
........................................................UCAGUUCCACCgGCUCACCAAU.................... len:22 al:69
........................................................UCAGUUCCACCAGCUCACCAA..................... len:21 al:778
........................................................UCAGUUCuACCAGCUCACCAAUA................... len:23 al:18
........................................................UCAGUUCuACCAGCUCACC....................... len:19 al:3
........................................................gCAGUUCCACCAGCUCACC....................... len:19 al:2
........................................................UCAGUUCCcCCAGCUCACCA...................... len:20 al:2
........................................................UCAGUUuCACCAGCUCACCAAU.................... len:22 al:6
........................................................UCAGUUCCACCAGCUCAu........................ len:18 al:22
........................................................UCAGUUCCACCAGCUCACCAAc.................... len:22 al:1221
........................................................UCAGUUCCACCAGCUCACCAcU.................... len:22 al:22
........................................................UaAGUUCCACCAGCUCACCAAUA................... len:23 al:1
........................................................UCAGUUCCACCAGCUCACCgAU.................... len:22 al:76
........................................................UCAGUUCCACCAGuUCACC....................... len:19 al:1
........................................................UCAGUUCCACCcGCUCACCA...................... len:20 al:1
........................................................UCAGUUCCACuAGCUCACCAAUA................... len:23 al:20
........................................................UCAGUUCCACCAGCUCgCCAAUA................... len:23 al:58
........................................................UCAGUUCCACCAGCUCACCgA..................... len:21 al:2
........................................................UCAGUUCCACCAGCUC.......................... len:16 al:8
........................................................UCAGUUCCACCAGCUCACCAg..................... len:21 al:7
........................................................UCAGUUCCACCAGCUCAuCAAUA................... len:23 al:14
........................................................UCAGUUCCAaCAGCUCACCAAU.................... len:22 al:4
........................................................UCcGUUCCACCAGCU........................... len:15 al:2
........................................................UCAGUUaCACCAGCUCACCAAUA................... len:23 al:2
........................................................UCAGUUCCACCAGCUCACCAuUA................... len:23 al:121
........................................................UCAGUUCCACCAGCcCACCAAU.................... len:22 al:90
........................................................UCAGUUCCACCgGCUCACCA...................... len:20 al:7
........................................................UCAGUUCCACCAGCUCACa....................... len:19 al:74
........................................................UCAGUUCCACCuGCUCACCAA..................... len:21 al:1
........................................................UCAGUUuCACCAGCUCACCAAUA................... len:23 al:7
........................................................UCAGUUCCACCAGCUCA......................... len:17 al:23
........................................................UCAGUUCCACCAGCUuACC....................... len:19 al:1
........................................................cCAGUUCCACCAGCUCACCA...................... len:20 al:13
........................................................aCAGUUCCACCAGCUCACCAAU.................... len:22 al:56
........................................................UCAGUUCCACCuGCUCACC....................... len:19 al:3
........................................................UCAGUUCCAuCAGCUCACCAA..................... len:21 al:3
........................................................UCgGUUCCACCAGCUCACCA...................... len:20 al:6
........................................................UCAGUUCCACCAGCUCAuCA...................... len:20 al:3
........................................................UCAGUUCCACCAGCUCACuAAU.................... len:22 al:25
........................................................UCAGUUCCACCAGCUCACuAAUA................... len:23 al:16
........................................................UCuGUUCCACCAGCUCACCAAUA................... len:23 al:9
........................................................UCAGUUCCACCAGCaCACCAAU.................... len:22 al:18
........................................................UCAGUUCCACCAGCc........................... len:15 al:2
........................................................UCAGUUCCACCAuCUCACCA...................... len:20 al:46
........................................................UCAGUUCCACCAGCUCgCCAA..................... len:21 al:3
........................................................UCAGUUCCACCAGCUCAa........................ len:18 al:4
........................................................UCAGUUCCACCAGCUuACCAAUA................... len:23 al:19
........................................................UCAGUUCCACCAGCUCAaC....................... len:19 al:2
........................................................UCAGUUCCACCuGCUCACCAAUA................... len:23 al:12
........................................................UCAGUUCCACCAGCUCAg........................ len:18 al:4
........................................................UCAGUUCCACCAGCUgACCAAUA................... len:23 al:1
........................................................UCAGUUCCACCAGCUCACgA...................... len:20 al:1
........................................................UCAGUUCCACCAGCcCACCAAUA................... len:23 al:65
........................................................UuAGUUCCACCAGCUCACCAAUA................... len:23 al:15
........................................................UCAGUUCCACCAGCUCACCAc..................... len:21 al:4
........................................................UCAuUUCCACCAGCUCACCAAUA................... len:23 al:1
........................................................UCAGcUCCACCAGCUCACCAAUA................... len:23 al:69
........................................................UCgGUUCCACCAGCUCACCAA..................... len:21 al:3
........................................................UCAGUUCCACaAGCUCACCAAU.................... len:22 al:4
........................................................gCAGUUCCACCAGCUCACCAAU.................... len:22 al:4
........................................................UCAGUUCCACCAGCcCACCAA..................... len:21 al:7
........................................................UCAGUUCCACCAGCUCAaCA...................... len:20 al:2
........................................................UCAGUUCCACCAGCUaACCAAU.................... len:22 al:5
........................................................UCAGUUCCACCAGCUaACCAAUA................... len:23 al:1
........................................................UCAGUUCCACCAGCUCuCCAAU.................... len:22 al:9
........................................................UCAGUUCCACCuGCUCAC........................ len:18 al:1
........................................................UCuGUUCCACCAGCUCACCAA..................... len:21 al:1
........................................................UCAGUUCCACCAGCUCACCc...................... len:20 al:8
........................................................UCAGUUCCACCcGCUCACCAAUA................... len:23 al:12
........................................................UCAGUUCCACCAGCUCAuCAAU.................... len:22 al:23
........................................................UCAGUUCCACCAGCaCACCA...................... len:20 al:1
........................................................aCAGUUCCACCAGCUCACCAA..................... len:21 al:1
........................................................UCAGUUCCACCgGCUCACCAA..................... len:21 al:3
........................................................UCAGUUCCACCAGCUCuCCAAUA................... len:23 al:3
........................................................UCAGUUCCACCAGCUCACCuAU.................... len:22 al:122
........................................................UCAGUUCCACCAaCUCACCAAU.................... len:22 al:38
........................................................UCAGUUCCACCAcCUCACCA...................... len:20 al:1
........................................................UCAGUUCCACCAGCUCACCAu..................... len:21 al:47
........................................................aCAGUUCCACCAGCUCACCA...................... len:20 al:4
........................................................UCAGUUCCACCAGCUCAuCAA..................... len:21 al:2
........................................................UCAGUUCCACCAGCUCACCAAUc................... len:23 al:492
........................................................UCAaUUCCACCAGCUCACCAAU.................... len:22 al:15
........................................................UCAGUUCCACCAuCUCACCAAUA................... len:23 al:15
........................................................UCAGUUCCACCAGCUCACCAAUAGu................. len:25 al:4
........................................................UCcGUUCCACCAGCUCACCAAUA................... len:23 al:13
........................................................UCAGUUCCACCAGCUCACCAAaA................... len:23 al:5
........................................................aCAGUUCCACCAGCUCACCAAUA................... len:23 al:53
........................................................UCAGUUCCAuCAGCUCACCAAUA................... len:23 al:8
........................................................UCAGUUCuACCAGCUCACCAA..................... len:21 al:1
........................................................UCAGUUCCACCAGuUCACCA...................... len:20 al:2
........................................................UCAGUUCCACCAGCUCAaCAAUA................... len:23 al:2
........................................................UCAGUUCCACCAGaUCACCAAU.................... len:22 al:1
........................................................UCAGUUCCAgCAGCUCACCAAU.................... len:22 al:1
........................................................UCgGUUCCACCAGCUCACCAAUA................... len:23 al:56
........................................................UCAGcUCCACCAGCUCACCA...................... len:20 al:12
........................................................UCAGUUCCACCAGCUCACCg...................... len:20 al:28
........................................................UCAGUUCCACCgGCUCACC....................... len:19 al:7
........................................................UCAGcUCCACCAGCUCACC....................... len:19 al:6
........................................................UCAGUUCuACCAGCUCACCAAU.................... len:22 al:19
........................................................UCAGUUCCuCCAGCUCACCAAUA................... len:23 al:2
........................................................UuAGUUCCACCAGCUCACCAA..................... len:21 al:1
........................................................UCAGUUCCACCAGuUCACCAAU.................... len:22 al:28
........................................................UCcGUUCCACCAGCUCACCAAU.................... len:22 al:21
........................................................UCgGUUCCACCAGCUCACC....................... len:19 al:6
........................................................UCAGUUCCACCAGCUCACCAcUA................... len:23 al:3
........................................................UCAGUUCCACuAGCUCACC....................... len:19 al:4
........................................................UCAGUUCCACCAGCUCACCAgUA................... len:23 al:22
........................................................UCAGUUCCACCAGCUCAC........................ len:18 al:69
........................................................UCAGUUCCACCAGCUCAgCAA..................... len:21 al:17
........................................................UCAGUUCCACCAGCUCACCAAUAa.................. len:24 al:44
........................................................UCAGUUCCACCAGgUCACCAAUA................... len:23 al:1
........................................................UCAGcUCCACCAGCUCACCAAU.................... len:22 al:81
........................................................UCAGUUCCACCAuCUCACCAA..................... len:21 al:17
........................................................UCAGUUCCACCAGCUuACCA...................... len:20 al:1
........................................................UCAGUUCCcCCAGCUCACCAAU.................... len:22 al:14
........................................................UCAGUUCCACgAGCUCACCAAU.................... len:22 al:1
........................................................UCAGgUCCACCAGCUCACCAAUA................... len:23 al:2
........................................................UCAGUUCCAuCAGCUCACC....................... len:19 al:1
........................................................UCAGUUCCACCAaCUCACCA...................... len:20 al:1
........................................................UCAGUUCCACCgGCUCACCAAUA................... len:23 al:50
........................................................cCAGUUCCACCAGCUCA......................... len:17 al:1
........................................................UCAGUUCCcCCAGCUCACC....................... len:19 al:2
........................................................UCAGUUuCACCAGCUCACCA...................... len:20 al:1
........................................................UCuGUUCCACCAGCUCACCAAU.................... len:22 al:13
........................................................UCAGUUCCACCAGCUCACCuAUA................... len:23 al:4
........................................................cCAGUUCCACCAGCUCACCAAUA................... len:23 al:84
........................................................aCAGUUCCACCAGCUCACC....................... len:19 al:3
........................................................UCAGUUCCACCuGCUCACCAAU.................... len:22 al:16
........................................................UCcGUUCCACCAGCUCACC....................... len:19 al:1
........................................................UCAGUUCCACuAGCUCACCAA..................... len:21 al:1
........................................................UCAuUUCCACCAGCUCACCAAU.................... len:22 al:1
........................................................UCAGUUCCACCAGCUaACCA...................... len:20 al:1
........................................................UCAGUUCCACCAGCUCACCAAUAc.................. len:24 al:23
........................................................UCAGUUCCACCAGCUCACCgAUA................... len:23 al:63
........................................................UCAGUUCCACCAGCUCACCu...................... len:20 al:21
........................................................UCAGUUCCACCAGgUCACCAAU.................... len:22 al:2
........................................................UCAGUUCCgCCAGCUCACC....................... len:19 al:7
........................................................UCAGUUCCACCAcCUCACCAAU.................... len:22 al:12
........................................................UCAGUUCCACCAGCUuACCAA..................... len:21 al:3
........................................................UCAGaUCCACCAGCUCACCAAU.................... len:22 al:11
........................................................UCAGUUCCACCAGCUCACCA...................... len:20 al:1696
........................................................UCAGUUCCACaAGCUCACCAAUA................... len:23 al:3
........................................................UCAGUUCCACCAGCUCACCAAg.................... len:22 al:71
........................................................UCAGUUCCACCAGCU........................... len:15 al:22
........................................................UCAGUUCCACCAGCUCACCAAU.................... len:22 al:20644
........................................................UCAaUUCCACCAGCUCACCAAUA................... len:23 al:12
........................................................UCAGUUCCACCAGCUCACCAuU.................... len:22 al:34
........................................................UCAGUUCCACCAGCUCAgCAAU.................... len:22 al:165
........................................................UCAGUUaCACCAGCUCACC....................... len:19 al:1
........................................................UCAGUUCCACCAuCUCACC....................... len:19 al:65
........................................................UCAGUUCCACCAGCUCACuA...................... len:20 al:12
........................................................UCAGUUCCACCAGCUCACC....................... len:19 al:1498
........................................................UCAGUUCCACCAaCUCACCAA..................... len:21 al:1
........................................................UCAGUUCCgCCAGCUCACCA...................... len:20 al:11
........................................................UCuGUUCCACCAGCUCACC....................... len:19 al:1
........................................................UCAGUUCCACCAGCgCACCAAU.................... len:22 al:3
........................................................UCAGUUCCACCAcCUCACCAAUA................... len:23 al:1
........................................................UCAGUUCCgCCAGCUCACCAAUA................... len:23 al:56
........................................................gCAGUUCCACCAGCUCACCAAUA................... len:23 al:3
........................................................UCAGUUCCACCAGCUCACCAAa.................... len:22 al:138
........................................................UCAGUUCCACuAGCUCACCAAU.................... len:22 al:37
........................................................UCAGUUCCACCAGCUgACCAAU.................... len:22 al:2
........................................................UCAGUUCCACCAGCUCcCCAAU.................... len:22 al:4
........................................................UCAGUUCCcCCAGCUCACCAAUA................... len:23 al:10
........................................................UCgGUUCCACCAGCUCACCAAU.................... len:22 al:79
........................................................UCAGUUCCAgCAGCUCACCAAUA................... len:23 al:1
........................................................UCAGUUCCACCAGCUCACCAAUAaG................. len:25 al:1
........................................................UCAGUUCCACCAGCUCgCCAAU.................... len:22 al:75
........................................................UCAGUUCCACCAGCUCACCAAgA................... len:23 al:11
........................................................UCAGUUCCACCAGCUCACu....................... len:19 al:203
........................................................UCAGUUCCACCAGCUCACCcAUA................... len:23 al:7
........................................................UCAGUUCCACCAGCUCAgCA...................... len:20 al:71
........................................................UCAGUUCCACCAGCUCgCC....................... len:19 al:9
........................................................UCAGUUCCAaCAGCUCACCAAUA................... len:23 al:4
........................................................UCAGUUCCACCAGCUCuCC....................... len:19 al:2
........................................................cCAGUUCCACCAGCUCACCAA..................... len:21 al:6
........................................................UCAGUUCCACCAGCUCACaAAU.................... len:22 al:14
........................................................cCAGUUCCACCAGCUCACC....................... len:19 al:6
........................................................UCAGUUCCuCCAGCUCACCAAU.................... len:22 al:14
........................................................UCgGUUCCACCAGCUCA......................... len:17 al:1
........................................................UCAGUUuCACCAGCUCACC....................... len:19 al:1
........................................................UCAGUUCCAuCAGCUCACCAAU.................... len:22 al:27
........................................................cCAGUUCCACCAGCUCACCAAU.................... len:22 al:117
........................................................UCAGUUCCACCcGCUCACCAAU.................... len:22 al:12
........................................................UCAGaUCCACCAGCUCACCAAUA................... len:23 al:4
........................................................UCAaUUCCACCAGCUCACCA...................... len:20 al:1
........................................................UCAGUUCCACCAGCUCgCCA...................... len:20 al:5
........................................................UCAGgUCCACCAGCUCACCAAU.................... len:22 al:2
........................................................UCAGUUCCACgAGCUCACCAAUA................... len:23 al:1
........................................................UCAGUUCCACCAGCUCACaAAUA................... len:23 al:3
........................................................UgAGUUCCACCAGCUCACCAAU.................... len:22 al:1
........................................................UCAGUUCCACCAGCUCu......................... len:17 al:3
........................................................UCAGUUCCACCAGCcCACC....................... len:19 al:6
........................................................UCAGUUCCACCAGCUCACCcAU.................... len:22 al:6
........................................................UCAGUUCCACCAGuUCACCAAUA................... len:23 al:29
........................................................UCAGUUCCACCAGCUCAuC....................... len:19 al:9
........................................................UCAGUUCaACCAGCUCACCAAUA................... len:23 al:2
........................................................UCAGUUCCACCAGCUCACaA...................... len:20 al:1
........................................................UCAGUUCCACCAGCUCACCAgU.................... len:22 al:428
........................................................UCAGUUCCACCAGCUCACCuA..................... len:21 al:1
........................................................UuAGUUCCACCAGCUCACCAAU.................... len:22 al:28
........................................................UCAGUUCCACCAGCUCACCAAUu................... len:23 al:9608
........................................................UCAGUUCCACCAGCUCAgC....................... len:19 al:99
........................................................UCAGUUCCACCAGCUCACCAAcA................... len:23 al:34
........................................................UCAGUUCCgCCAGCUCACCAAU.................... len:22 al:75
........................................................UCAGUUCCAuCAGCUCACCA...................... len:20 al:2
........................................................UCAGUUCCACCAGCcCACCA...................... len:20 al:5
........................................................UCAGUUCCACCAGCUCcCCAAUA................... len:23 al:9
........................................................UCAGUUCCACCAGCUCACCAAUAG.................. len:24 al:4
.........................................................CAGUUCCACCAGCUCACC....................... len:18 al:1
.........................................................CAGUUCCACCAGCUCACCAAc.................... len:21 al:3
.........................................................CAGUUCCgCCAGCUCACCAAU.................... len:21 al:3
.........................................................CAGUUCCACCAGCUCACCAAU.................... len:21 al:49
.........................................................CAGUUCCACCAGCUCACCAAUu................... len:22 al:19
.........................................................CAGUUCCACCAGCUCACCAAUA................... len:22 al:34
.........................................................CAGUUCCACCAGCUCAgCAAU.................... len:21 al:1
.........................................................CAGUUCCACCAGCUCACCAgU.................... len:21 al:3
.........................................................CAGUUCCACCAGCUCACuAAU.................... len:21 al:1
.........................................................CAGUUCCACCAGCUCACCAAUc................... len:22 al:3
.........................................................CAGUUCCACCAGCUCAgC....................... len:18 al:1
.........................................................CAGUUCCACCAGCUCACCAA..................... len:20 al:5
.........................................................CAGUUCCACCAGCUCACCA...................... len:19 al:5
..........................................................AGUUCCACCAGCUCACCAAUu................... len:21 al:17
..........................................................AGUUCCACCAGCUCACCAA..................... len:19 al:1
..........................................................AGUUCCACCAGCUCACCAAUA................... len:21 al:24
..........................................................AGUUCCACCAGCUCACCAgU.................... len:20 al:2
..........................................................AGUUCCACCAGCUCACCAAc.................... len:20 al:1
..........................................................AGUUCCACCAGCUCACCA...................... len:18 al:3
..........................................................AGUUCCACCAGCUCAuCAAU.................... len:20 al:1
..........................................................AGUUCCACCAGCUCACCAAU.................... len:20 al:20
..........................................................AGUUCCACCAGCUCACCAAUc................... len:21 al:2
..........................................................AGUUCCACCAGCUCACCAAa.................... len:20 al:1
..........................................................AGUUCCACCAGCcCACCAAU.................... len:20 al:1
...........................................................GUUCCACCAGCUCACCAAUu................... len:20 al:5
...........................................................GUUCCACCAGCUCACCAAUA................... len:20 al:21
...........................................................GUUCCACCAGCUCACCAAUc................... len:20 al:3
...........................................................GUUCCACCAGCUCACCAA..................... len:18 al:4
...........................................................GUUCCACCAGCUCACCAAU.................... len:19 al:15
...........................................................GUUCCACCAGCUCAgCAAU.................... len:19 al:1
............................................................UUCCACCAGCUCACCAuU.................... len:18 al:4
............................................................UUCCACCAGCaCACCAAUA................... len:19 al:1
............................................................UUCCACCAGCUCACCAAcA................... len:19 al:1
............................................................UUCCgCCAGCUCACCAAUA................... len:19 al:3
............................................................UUCCACCAGCUCACCAAUA................... len:19 al:489
............................................................UUCCACCAGCUCACCuAU.................... len:18 al:1
............................................................cUCCACCAGCUCACCAAU.................... len:18 al:1
............................................................UUCCACCAGCUCAaCAAU.................... len:18 al:1
............................................................UUCCACCAGCUCACCAAc.................... len:18 al:11
............................................................UUCCACCAGCUCACCgAUA................... len:19 al:3
............................................................UUCCACCAGCUCACCAA..................... len:17 al:1
............................................................UUCCACCAGCUCgCCAAUA................... len:19 al:2
............................................................UUCCACCAGCUCACCAgU.................... len:18 al:9
............................................................UUCCACCcGCUCACCAAUA................... len:19 al:1
............................................................UUCCACCAGCUCACuAAU.................... len:18 al:3
............................................................UUCCACCAGCUCACCAuUA................... len:19 al:6
............................................................UUCCACCAGCUCACCgAU.................... len:18 al:1
............................................................UUCCACCAGCcCACCAAUA................... len:19 al:1
............................................................UUCCACCAGCUCACCAAUu................... len:19 al:74
............................................................UUCCACCAGCUCAaCAAUA................... len:19 al:2
............................................................UUCCACCAGCcCACCAAU.................... len:18 al:1
............................................................UUCCACCAGCUCACCAAUc................... len:19 al:2
............................................................aUCCACCAGCUCACCAAUA................... len:19 al:4
............................................................cUCCACCAGCUCACCAAUA................... len:19 al:4
............................................................UUCCACCAGCUCACCAAg.................... len:18 al:3
............................................................UUCCACCAGCUCACCAAUAG.................. len:20 al:1
............................................................UUCCACCAGCUCACCAAU.................... len:18 al:196
............................................................UUCCACCAGCUCACCAAa.................... len:18 al:4
............................................................UUCCACCgGCUCACCAAUA................... len:19 al:2
............................................................UUCCACCAGCUCcCCAAU.................... len:18 al:1
............................................................UUCCAuCAGCUCACCAAUA................... len:19 al:1
............................................................UUCCACCAGCUCACCuAUA................... len:19 al:1
............................................................UUCCACCgGCUCACCAAU.................... len:18 al:1
.............................................................UCCACCAGCUCACCAAUA................... len:18 al:9
................................................................ACCAGCUCACCAAUAGGCCA.............. len:20 al:1
.....................................................................CUCACCAAUAGGCCAGAUGAUAACAU... len:26 al:1