Genome: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/F-Ptua/data/Pocillopora_meandrina_HIv1.assembly.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/F-Ptua/output/04-Ptua-sRNA-discovery-ShortStack/ShortStack_out/merged_alignments.bam
Location: Pocillopora_meandrina_HIv1___Sc0000010:8012916-8013008 plus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/F-Ptua/output/04-Ptua-sRNA-discovery-ShortStack/ShortStack_out/strucVis/Cluster_3415.ps.pdf
Locus Name: Cluster_3415
UAUGCAGUAAGUUUUGUGUUUUUACUUCAAUGUUAUCGGUUUGUUUAAAACGAACCGAUAACAUUGAAGUUAAAACACAAAACUUGUAAACAA
.......(((((((((((((((.((((((((((((((((((((((...)))))))))))))))))))))).)))))))))))))))....... (-49.00)
....CAGUAAGUUUUGUGUUUU....................................................................... len:18 al:1
......GUAAGUUUgGUGUUUUUA..................................................................... len:18 al:1
....................UUUACUUCAAUGUUgUCGGUUUGU................................................. len:24 al:1
....................UUUACUUCgAUGUUAUCGGUUUGU................................................. len:24 al:1
....................UUUACUUCAAUGUUAUCGGUUUGc................................................. len:24 al:35
....................UUUACUUCAAUGUUAUCGGUUUaU................................................. len:24 al:3
....................UUUACUUCAAUGUUcUCGGUUUGU................................................. len:24 al:1
....................UUUACUUCAAUGUUAUCGGc..................................................... len:20 al:1
....................UUUACUcCAAUGUUAUCGGUUUGU................................................. len:24 al:4
....................UUUACUUCAAUGUUAUCGGUUUGa................................................. len:24 al:7
....................UUUACUUCAAUGUUAUCGaUUUGU................................................. len:24 al:11
....................UUUACUUCAAUGUUAUCGGUUUGUa................................................ len:25 al:8
....................UUUACUUCAAUGUUAUCGGU..................................................... len:20 al:2
....................cUUACUUCAAUGUUAUCGGUUU................................................... len:22 al:14
....................UUUACUUCAAUGUUAUCGGUUUGg................................................. len:24 al:1
....................cUUACUUCAAUGUUAUCGGUUUGU................................................. len:24 al:40
....................UUUACcUCAAUGUUAUCGGUUUGU................................................. len:24 al:1
....................UUUACUUCAAUGUcAUCGGUUUGU................................................. len:24 al:1
....................UUUACUUCAAUGUUAUCGGUUUGUc................................................ len:25 al:3
....................UUUACUUCAAUGUUAUCGGUUUGU................................................. len:24 al:319
....................UUUACUUCuAUGUUAUCGGUUUGU................................................. len:24 al:1
....................UUUACUUCAAUGUUAUCGGUcUGU................................................. len:24 al:2
....................UcUACUUCAAUGUUAUCGGUUUGU................................................. len:24 al:2
....................cUUACUUCAAUGUUAUCGGUUUGUU................................................ len:25 al:1
....................UUUACUUCAAUGUUAUCGuUUUGU................................................. len:24 al:1
....................UUUACUUCAAUGUUAUCGGUUU................................................... len:22 al:23
....................UUUACUUCAAUGUUAUCGGUgU................................................... len:22 al:1
....................UUUgCUUCAAUGUUAUCGGUUUGU................................................. len:24 al:1
....................UUUACUUCAAUGUUAUCGGUaU................................................... len:22 al:3
....................UUUACUUCAAUGUUAUCGGUUUGUU................................................ len:25 al:10
.....................UUACUUCAAUGUUcUCGGU..................................................... len:19 al:1
.....................UUACUUCcAUGUUAUCGGU..................................................... len:19 al:1
.....................UUACUUCAAUGUUAUCGGUUUGg................................................. len:23 al:215
.....................UUACUUCgAUGUUAUCGGU..................................................... len:19 al:2
.....................UUACUUCAAUGUUAUCGGUgUGU................................................. len:23 al:2
.....................UUACUUCAgUGUUAUCGGUUUGUU................................................ len:24 al:11
.....................UUACUgCAAUGUUAUCGGUUUGU................................................. len:23 al:2
.....................UUACUUCAAUGUUAUCaGUUUGUU................................................ len:24 al:4
.....................UUACUUCAAUGUUAUCGGUUUGUUUuAAA........................................... len:29 al:1
.....................UUACUcCAAUGUUAUCGGUU.................................................... len:20 al:1
.....................UUACUUCAAUGUUAUCGGUaU................................................... len:21 al:3
.....................UUACUUCAAUGUUAUgGGUUUGU................................................. len:23 al:2
.....................UUACUUCAAUGUUAaCGGUUUGU................................................. len:23 al:2
.....................UUACUUCAAUGUUAUCGGUUUa.................................................. len:22 al:6
.....................UUACUUCAAUGUUAUCGGgUUGU................................................. len:23 al:14
.....................UUACUUCAAUGUUAUCGGUgU................................................... len:21 al:1
.....................UUAuUUCAAUGUUAUCGGUUUGU................................................. len:23 al:16
.....................UUACgUCAAUGUUAUCGGUUUGUU................................................ len:24 al:1
.....................UUAaUUCAAUGUUAUCGGUUUGU................................................. len:23 al:1
.....................UUACUUCAAUGUUAUCGGUUcGU................................................. len:23 al:27
.....................UUACUcCAAUGUUAUCGGUUUGU................................................. len:23 al:142
.....................UUACUUCAAUGUUAUCGGUUUGaU................................................ len:24 al:6
.....................UUACUUCAAUGUUAUaGGUUUGU................................................. len:23 al:3
.....................UUACUUCAAcGUUAUCGGUUUGUUU............................................... len:25 al:1
.....................UUACUUCAAUGUcAUCGGUUUGU................................................. len:23 al:64
.....................UUACUUCAAUuUUAUCGGUUUGU................................................. len:23 al:2
.....................UUACUUCAAUGUUAUCGGU..................................................... len:19 al:84
.....................UUACUUCAAUGUUAUCGGUUc................................................... len:21 al:2
.....................gUACUUCAAUGUUAUCGGUUUGUU................................................ len:24 al:1
.....................UUACUUCAAUGUUAUCGGUUUcU................................................. len:23 al:3
.....................UUACUUCAAUGUUAUCGGUUUGUaU............................................... len:25 al:14
.....................UaACUUCAAUGUUAUCGGUUUGU................................................. len:23 al:2
.....................UUACUUCAAUGUUAUCGGUUUGcU................................................ len:24 al:12
.....................UUACUUCAAUGUUAUCGaU..................................................... len:19 al:1
.....................UUACUUCAAUGUUAUCGGUUa................................................... len:21 al:1
.....................UUACUUCAuUGUUAUCGGUUUGU................................................. len:23 al:2
.....................UUACUUCAAUGUUAUCGG...................................................... len:18 al:8
.....................UUACUUCAAUaUUAUCGGUUUGU................................................. len:23 al:18
.....................UUACUUCAAcGUUAUCGGUUUGU................................................. len:23 al:73
.....................UUACUUaAAUGUUAUCGGUUUGU................................................. len:23 al:15
.....................UUACUUCAAUGUUAUCGGcUUGUUU............................................... len:25 al:1
.....................UUACUUCAgUGUUAUCGGUUUG.................................................. len:22 al:3
.....................UUACUUCAAUGUUAUCGGUUUGUU................................................ len:24 al:2431
.....................UUACUUCcAUGUUAUCGGUUUGU................................................. len:23 al:25
.....................UUACUUCAAcGUUAUCGGU..................................................... len:19 al:1
.....................UUACUUCAAUGUaAUCGGUUUGU................................................. len:23 al:5
.....................UUACUUCAAUGUUAUCGGUUUGUgU............................................... len:25 al:8
.....................UUACUUCAAUGUUAcCGGUUUGU................................................. len:23 al:63
.....................UUACUUCAAUGUUAUCGGUaUGUU................................................ len:24 al:1
.....................UUACUUCAAUGUUAcCGGUUUGUU................................................ len:24 al:5
.....................UUACcUCAAUGUUAUCGGUUUGU................................................. len:23 al:103
.....................UUACUUCAAUGUUAUCGGUUUaUU................................................ len:24 al:1
.....................UUACUUCAAUGUUAUCGGUUUGgU................................................ len:24 al:41
.....................UUACUUCAAgGUUAUCGGUUUGU................................................. len:23 al:1
.....................UUACUUCAAUGUUAUCGGcUUGUU................................................ len:24 al:2
.....................UUACUUCAAUGUUAUCGGUUcGUU................................................ len:24 al:3
.....................UUACUUCAAUGUUAUCGGUc.................................................... len:20 al:2
.....................aUACUUCAAUGUUAUCGGUUUGU................................................. len:23 al:52
.....................UUACUUCAAUGUUAUCGGUaUGU................................................. len:23 al:3
.....................UUACUUCAAUGUUgUCGGUUUGUU................................................ len:24 al:8
.....................UUACUUCAAUGUUcUCGGUUUGU................................................. len:23 al:21
.....................UUACUUCAAUGUUAUCGGUUUG.................................................. len:22 al:154
.....................UUACUUCAAUGUUAUCGGUUUGUUUuAAACG......................................... len:31 al:2
.....................UUACUUCAAUGUUAgCGGUUUGU................................................. len:23 al:2
.....................UUACUUCAAUGUUAUCGGUU.................................................... len:20 al:52
.....................UUACUUCAAUGUUgUCGGUUUGU................................................. len:23 al:105
.....................UUcCUUCAAUGUUAUCGGUUUGU................................................. len:23 al:16
.....................UUACUUCAAUGUUAUCGGcUUGU................................................. len:23 al:78
.....................UUuCUUCAAUGUUAUCGGUUUGU................................................. len:23 al:1
.....................cUACUUCAAUGUUAUCGGUUUG.................................................. len:22 al:2
.....................aUACUUCAAUGUUAUCGGUUUGUU................................................ len:24 al:2
.....................UUACUUCAAUGUUAUCGGUUUGUa................................................ len:24 al:143
.....................UUACUUCAAUGUUAUCGGUUUGa................................................. len:23 al:324
.....................cUACUUCAAUGUUAUCGGUUUGUU................................................ len:24 al:10
.....................UUACUUCAAcGUUAUCGGUUUGUU................................................ len:24 al:2
.....................UUACUUCgAUGUUAUCGGUUUGUU................................................ len:24 al:9
.....................UUACUUCAAUGUUAUCGaUUUGU................................................. len:23 al:807
.....................UUACUUCAAUGgUAUCGGUUUGU................................................. len:23 al:9
.....................gUACUUCAAUGUUAUCGGUUUGU................................................. len:23 al:3
.....................UUACUUCAAUGUUAUCGGUUUGUUU............................................... len:25 al:97
.....................UUACUUCAAUGUUAUCGa...................................................... len:18 al:1
.....................UUACUUCAAUGUUAUCGGUUUGUg................................................ len:24 al:12
.....................UcACUUCAAUGUUAUCGGUUUGUU................................................ len:24 al:5
.....................UUACUUCAAUGUUAUCGGUUUGUc................................................ len:24 al:203
.....................UUACUUCAAUGUUAUCGaUUU................................................... len:21 al:1
.....................UUACUcCAAUGUUAUCGGUUUGUUU............................................... len:25 al:2
.....................UUACUUCAAUGUUAUCGGUUUGUUUuAAAC.......................................... len:30 al:15
.....................UUACUUCAAUGUUuUCGGUUUGU................................................. len:23 al:3
.....................UUACUUCAcUGUUAUCGGUUUGUU................................................ len:24 al:2
.....................UUACUUCAAUGUUcUCGGUUUGUU................................................ len:24 al:2
.....................UUACUUCAAUGUUAUCGGa..................................................... len:19 al:1
.....................UUACcUCAAUGUUAUCGGUUUGUU................................................ len:24 al:2
.....................UUACUUCAAUGUUAUCGuUUUGU................................................. len:23 al:2
.....................UUACUUCAAUGUUAUCGGUUUGUUa............................................... len:25 al:55
.....................UUACUUCAgUGUUAUCGGUUUGU................................................. len:23 al:71
.....................UUgCUUCAAUGUUAUCGGUUUGUU................................................ len:24 al:7
.....................UUACgUCAAUGUUAUCGGUUUGU................................................. len:23 al:5
.....................UUACUUCAAUGUUAUCGGUUU................................................... len:21 al:122
.....................UUACUUCAAUGUUAUCGGc..................................................... len:19 al:5
.....................UUACUUCAAUGUUAUCGGUUaGU................................................. len:23 al:2
.....................UUACUUCAAUGUUAUCGGUcU................................................... len:21 al:1
.....................UUACUUCAAUGcUAUCGGUUUGU................................................. len:23 al:73
.....................UUACUUCAAUGUUAUCuGU..................................................... len:19 al:1
.....................UUACUUCAAUGUUAUCGGUUUaU................................................. len:23 al:199
.....................UUACUUCAAUGUUAUCcGUUUGU................................................. len:23 al:2
.....................UUACUUCAAUGaUAUCGGUUUGU................................................. len:23 al:3
.....................UUACUUCAAUGUUAUCGGUUUGU................................................. len:23 al:32270
.....................UUACUUCAAUGUUAUCGaUUUGUU................................................ len:24 al:2
.....................UUACUcCAAUGUUAUCGGU..................................................... len:19 al:1
.....................UUACUcCAAUGUUAUCGGUUUGUU................................................ len:24 al:12
.....................UUcCUUCAAUGUUAUCGGUUUGUU................................................ len:24 al:2
.....................UUgCUUCAAUGUUAUCGGUUUGU................................................. len:23 al:45
.....................UcACUUCAAUGUUAUCGGUUUGU................................................. len:23 al:49
.....................UUACUaCAAUGUUAUCGGUUUGU................................................. len:23 al:8
.....................UUACUUCAAUaUUAUCGGUUUGUU................................................ len:24 al:1
.....................UUACUUCAAUGUUAUCGGUUUGUaUA.............................................. len:26 al:1
.....................UUACUUCgAUGUUAUCGGUUUGU................................................. len:23 al:125
.....................UUACUUCAAUGUUAUCGGaUUGU................................................. len:23 al:2
.....................UUACUUCAAUGUUAUCGGUcUGU................................................. len:23 al:80
.....................UUACUUuAAUGUUAUCGGUUUGU................................................. len:23 al:3
.....................UUACUUaAAUGUUAUCGGUUUGUU................................................ len:24 al:1
.....................UUcCUUCAAUGUUAUCGGUUU................................................... len:21 al:1
.....................UUACUUCAAUGUUAUCGGUUg................................................... len:21 al:1
.....................UUACUUCAAUGUUAUCGGUUUGUUUu.............................................. len:26 al:5
.....................UUACaUCAAUGUUAUCGGUUUGU................................................. len:23 al:2
.....................UUACUUCAAUGUUAUaGGUUUGUU................................................ len:24 al:1
.....................UUACUUCAAUGUUAcCGGUUUG.................................................. len:22 al:1
.....................UUACUUCAAUGUUAUCaGUUUGU................................................. len:23 al:28
.....................UUACUUCAAUGUUAUCGGUUUGUUUA.............................................. len:26 al:4
.....................UUACUUCAAUGUUAUCaGUUU................................................... len:21 al:1
.....................UUACUUuAAUGUUAUCGGUUUG.................................................. len:22 al:1
.....................UUACUUCAAUGUUAUCGGUcUGUU................................................ len:24 al:3
.....................UUACUUCAAUGUUAUCGGUa.................................................... len:20 al:1
.....................UUACUUCAcUGUUAUCGGUUUGU................................................. len:23 al:33
.....................UUACUUCAAUGUUAUCGGUUgGU................................................. len:23 al:5
.....................UUACUUCAAUGUUAUCGGUUUuU................................................. len:23 al:9
.....................UUACUUCAAUGcUAUCGGUUUGUU................................................ len:24 al:3
.....................UUACUUCAAUGUUAUCGGUUcG.................................................. len:22 al:1
.....................UUACUUCuAUGUUAUCGGUUUGU................................................. len:23 al:3
.....................UUACUUCAAUGUcAUCGGUUUGUU................................................ len:24 al:7
.....................UUACUcCAAUGUUAUCGGUUU................................................... len:21 al:2
.....................UcACUUCAAUGUUAUCGGUUU................................................... len:21 al:1
.....................UUACUUCAAcGUUAUCGGUUU................................................... len:21 al:1
.....................UUACUUCcAUGUUAUCGGUUUGUU................................................ len:24 al:2
.....................UUACUUCAAUGUUAUCGGgUUGUU................................................ len:24 al:2
.....................UUACUUCAAUGUUAUCGGUUUGUUc............................................... len:25 al:8
.....................UUACUUCAAUGUUAUCGGUUUGc................................................. len:23 al:2933
.....................cUACUUCAAUGUUAUCGGUUUGU................................................. len:23 al:138
......................UACUUCAAUGUUAUCGGUaU................................................... len:20 al:2
......................UACUUCAAUGUUAUCGGcUUGUU................................................ len:23 al:8
......................UACUUCAAUGUUAUCGGUaUGU................................................. len:22 al:3
......................UACUUCAAUGUUAUCGGaUUGU................................................. len:22 al:2
......................UgCUUCAAUGUUAUCGGUU.................................................... len:19 al:1
......................UACUUCAAUGUUAUCGGUc.................................................... len:19 al:1
......................UACUUCAAcGUUAUCGGUUUGUUU............................................... len:24 al:1
......................UACUUCAAUGUcAUCGGUUUGUU................................................ len:23 al:5
......................UACUUCAAUGUUAUCGGUUUGUUUAu............................................. len:26 al:1
......................aACUUCAAUGUUAUCGGUUUG.................................................. len:21 al:1
......................UcCUUCAAUGUUAUCGGUUUGUU................................................ len:23 al:5
......................UACUUCAAUGUUAUCGGUUcGU................................................. len:22 al:6
......................UACUUCAAUGUUAUCGGUUUGUUc............................................... len:24 al:3
......................aACUUCAAUGUUAUCGGUUUGUUU............................................... len:24 al:1
......................UACUUCAAUGUgAUCGGUUUGU................................................. len:22 al:4
......................UACUUCAAgGUUAUCGGUUUGU................................................. len:22 al:1
......................UACUcCAAUGUUAUCGGUUUGU................................................. len:22 al:98
......................UACUaCAAUGUUAUCGGUUUGU................................................. len:22 al:10
......................UACUUCAAUGUUAUCGGgUUGUU................................................ len:23 al:1
......................UACUUCAAUGUUAUCGGUUUGUUUuAAACG......................................... len:30 al:20
......................UACUUCAAUGUUAUCGGgU.................................................... len:19 al:1
......................gACUUCAAUGUUAUCGGUUUGU................................................. len:22 al:5
......................UACUUCAAUGUUAUCGGUUUGUUUuAAAC.......................................... len:29 al:16
......................UACUUCAAUGUaAUCGGUUUGU................................................. len:22 al:7
......................UACUUCgAUGUUAUCGGUUUGUU................................................ len:23 al:6
......................UACUUCAAUGUUAUCGGUUUa.................................................. len:21 al:8
......................aACUUCAAUGUUAUCGGUUUGU................................................. len:22 al:183
......................UACUUCAAUGUUAUCGGUUUGc................................................. len:22 al:2703
......................UACUUCAAUGUUAUCGGaUU................................................... len:20 al:2
......................cACUUCAAUGUUAUCGGUUUGUU................................................ len:23 al:6
......................UACUUCAAUGUUAUCGaUUUGU................................................. len:22 al:731
......................UACUUCAAUGUUAUCGGUUUGU................................................. len:22 al:28230
......................UACUUCAAUGUUAUCGGUUUGaU................................................ len:23 al:9
......................UACUUCAAcGUUAUCGGUU.................................................... len:19 al:1
......................UACUUCAAUGUUAcCGGUUUGU................................................. len:22 al:71
......................UuCUUCAAUGUUAUCGGUUUGU................................................. len:22 al:3
......................UACUUCAAUGUUcUCGGUUUGUU................................................ len:23 al:2
......................UACUUCAAUGUUAUCGGUUUG.................................................. len:21 al:100
......................UACUUCAAUGUUAUCGGUUUGUUa............................................... len:24 al:16
......................UACUUCAcUGUUAUCGGUUUGUU................................................ len:23 al:1
......................UACUUCAAUuUUAUCGGUUUGU................................................. len:22 al:1
......................UACUUCAAUGUUAUCGGUgUGU................................................. len:22 al:4
......................UACUUCAAUGUUAUCGGUUUGg................................................. len:22 al:183
......................UACUUCAAUGUUAUCGGUUUGa................................................. len:22 al:316
......................UACUUCAAcGUUAUCGGUUUGUU................................................ len:23 al:5
......................UACUUCAAUGcUAUCGGUUUGUU................................................ len:23 al:4
......................UACUUCAAUGUUAcCGGUU.................................................... len:19 al:1
......................UACUUCAAUGUUAUCGGUU.................................................... len:19 al:46
......................UACUUCAgUGUUAUCGGUUUGU................................................. len:22 al:126
......................UACUUCAAUGUUAcCGGUUUG.................................................. len:21 al:1
......................UACUUCAAUGUUAUCGuUUUGU................................................. len:22 al:1
......................UACUUCAAUGUUAUCGGUUc................................................... len:20 al:1
......................UACaUCAAUGUUAUCGGUUUGU................................................. len:22 al:1
......................UACUUCAAUGUUAUCGGUUaGU................................................. len:22 al:3
......................UACUUCAAaGUUAUCGGUUUGU................................................. len:22 al:1
......................UACUUCAgUGUUAUCGGUUUG.................................................. len:21 al:2
......................UACUUCAAUGaUAUCGGUUUGU................................................. len:22 al:6
......................UACUUCAAUGUUcUCGGUUUGUUU............................................... len:24 al:1
......................UACUUCAAUGUUAUCGGUUUuU................................................. len:22 al:4
......................UACUUCAAUGUUAUCGGUUUaU................................................. len:22 al:169
......................UACUUCAAUGUUAUCGGUUcGUU................................................ len:23 al:1
......................UACUUCuAUGUUAUCGGUUUGUU................................................ len:23 al:3
......................UACUUCAAUGUUAUCGGgUUGU................................................. len:22 al:8
......................UACUcCAAUGUUAUCGGUUUGUU................................................ len:23 al:8
......................UACUUCAAUGUUAUCGGUUUGUg................................................ len:23 al:9
......................UACUUCAAUGUUAUCGGc..................................................... len:18 al:7
......................UACUUaAAUGUUAUCGGUUUGU................................................. len:22 al:19
......................UACUUCAAUGUUAUCGGa..................................................... len:18 al:6
......................UACUUCAAcGUUAUCGGUUUGU................................................. len:22 al:53
......................UACUUCAAUaUUAUCGGUUUGU................................................. len:22 al:19
......................UACUUCAAUGUUgUCGGUUUGUU................................................ len:23 al:6
......................UACUUCAAUGUUAUCGGUa.................................................... len:19 al:2
......................UACUUCAAUGUUAUCGGUUUGUc................................................ len:23 al:147
......................UACUUCgAUGUUAUCGGUUUGU................................................. len:22 al:76
......................UAuUUCAAUGUUAUCGGUUUGUU................................................ len:23 al:1
......................UACUcCAAUGUUAUCGGUUU................................................... len:20 al:1
......................UgCUUCAAUGUUAUCGGUUUGU................................................. len:22 al:78
......................UACUUCAAUGUUuUCGGUUUGU................................................. len:22 al:2
......................UACUUCAAUGUUgUCGGUUUGU................................................. len:22 al:76
......................UACUUCAAUGUUAUCGGUUUGcUU............................................... len:24 al:2
......................UACUUCAAUGUUAUCGGUUUGUgU............................................... len:24 al:3
......................UACUUCAAUGUUAUCGGUUUGcU................................................ len:23 al:2
......................UACUUCAAUGUUAaCGGUUUGU................................................. len:22 al:5
......................UACUUCAAUGUUAUCGGUUU................................................... len:20 al:132
......................UACUUCAAUGUUAUCGGUUUGUUUA.............................................. len:25 al:1
......................UACcUCAAUGUUAUCGGUUUGU................................................. len:22 al:99
......................UACUUCAAUGUUAUCGGUcUGUU................................................ len:23 al:1
......................UACUUuAAUGUUAUCGGUUUGU................................................. len:22 al:5
......................aACUUCAAUGUUAUCGGUUUGUU................................................ len:23 al:8
......................UACUUCAgUGUUAUCGGUUUGUUU............................................... len:24 al:1
......................UACUUCAcUGUUAUCGGUUUGU................................................. len:22 al:23
......................UACUUCAAUGcUAUCGGUUUGU................................................. len:22 al:68
......................UACUUCuAUGUUAUCGGUUUGU................................................. len:22 al:6
......................UACUUCAAUGUUAUCGGcUUGU................................................. len:22 al:65
......................UACUUCAAUGUUAUCGGUUUcU................................................. len:22 al:3
......................UACUUCAAUGUUAUCGGUUUGgU................................................ len:23 al:40
......................UACUUCAAUGUUAUCaGUUUGUU................................................ len:23 al:3
......................UACcUCAAUGUUAUCGGUUUGUU................................................ len:23 al:10
......................UACUUCAAUGUUAcCGGUUUGUU................................................ len:23 al:2
......................UACUUCAAUGUUAUCGGUUa................................................... len:20 al:2
......................UACUUCAAUGUUAUCGaUUUG.................................................. len:21 al:1
......................UACUUCAAUGUUAUCGGUUUGUa................................................ len:23 al:59
......................UACaUCAAUGUUAUCGGUUUGUU................................................ len:23 al:1
......................UACUUCAAUGUUgUCGGUUUGUUU............................................... len:24 al:2
......................UACUUCAAUGUUAUCGGU..................................................... len:18 al:54
......................UAaUUCAAUGUUAUCGGUUUGU................................................. len:22 al:1
......................UACUUCAAUGUUAaCGGUUUGUU................................................ len:23 al:1
......................UACUUCAAUGUUAUCGGUcUGU................................................. len:22 al:81
......................aACUUCAAUGUUAUCGGUUU................................................... len:20 al:1
......................UACUUCcAUGUUAUCGGUUUGUU................................................ len:23 al:2
......................UACUUCAgUGUUAUCGGUUUGUU................................................ len:23 al:4
......................UACUUuAAUGUUAUCGGUUUGUU................................................ len:23 al:1
......................UACUUCAAUGUcAUCGGUUUGU................................................. len:22 al:51
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......................UACUUCAAUGUUAUCGGUUUGUU................................................ len:23 al:1843
......................UgCUUCAAUGUUAUCGGUUUGUU................................................ len:23 al:12
......................UACUUCAAUGUUcUCGGUUUGU................................................. len:22 al:18
......................UACUUCAAUGUUAUCGGUUUGUaU............................................... len:24 al:14
......................UACUUCAAUGUUAUCGGUUUGUUU............................................... len:24 al:47
......................UACUUaAAUGUUAUCGGUUUGUU................................................ len:23 al:1
......................cACUUCAAUGUUAUCGGUUUGU................................................. len:22 al:99
......................UcCUUCAAUGUUAUCGGUUUGU................................................. len:22 al:18
......................UAuUUCAAUGUUAUCGGUUUGU................................................. len:22 al:14
......................UACUUCcAUGUUAUCGGUUUGU................................................. len:22 al:30
......................UACUgCAAUGUUAUCGGUUUGU................................................. len:22 al:6
......................UACUUCAAUGUUAUCGGUUUGUUUu.............................................. len:25 al:3
......................UACUUCAAUGUUAUCuGUUUGU................................................. len:22 al:2
......................UACUUCAAUGUUAUCaGUUUGU................................................. len:22 al:23
.......................ACUUCAAUGUUAUCGGUU.................................................... len:18 al:1
.......................ACUUCAAUGUUAUCGGUUUGc................................................. len:21 al:3
.......................ACUUCAAUGUUAUCGGUUUGg................................................. len:21 al:1
.......................ACUUCAAUGUUAUCGGUUUGU................................................. len:21 al:21
.......................ACUUCAAUGUUAUCGGUUUGUU................................................ len:22 al:1
........................CUUCAAUGUUAUCGGUUU................................................... len:18 al:2
........................CUUCAAUGUUAUCGGUUUGUa................................................ len:21 al:3
........................CUUCAAUGUUAUCGGUUUGc................................................. len:20 al:3
........................CUUCAAUGUUAUCGaUUUGU................................................. len:20 al:1
........................CUUCAAUGUUAUCGGUUUGU................................................. len:20 al:25
........................CUUCAAUGUUAUCGGUUUGa................................................. len:20 al:1
.........................UUCgAUGUUAUCGGUUUGU................................................. len:19 al:3
.........................UUCAAUGUUAUCGGUUUGaU................................................ len:20 al:1
.........................UUCAAUGUUAUCGGUUUGc................................................. len:19 al:24
.........................UUCAAUGUUAUCGGUUUGUUUu.............................................. len:22 al:1
.........................UUCAAUGUUAcCGGUUUGU................................................. len:19 al:1
.........................UUCAAUGUUgUCGGUUUGU................................................. len:19 al:1
.........................UUCAAUGUUAUCGGUUUGUUUuAAACG......................................... len:27 al:1
.........................UUCAAUGUUAUCGGUUUaU................................................. len:19 al:4
.........................UUCgAUGUUAUCGGUUUGUU................................................ len:20 al:1
.........................UUCAAUGUUAUCGGUUUGgU................................................ len:20 al:1
.........................UUCAAcGUUAUCGGUUUGU................................................. len:19 al:1
.........................UUCAAUGUUAUCaGUUUGU................................................. len:19 al:1
.........................UUCAAUGUUAUCGGUUUGU................................................. len:19 al:290
.........................UUCAAUGUUAUCGGUUU................................................... len:17 al:1
.........................UUCAAUGaUAUCGGUUUGU................................................. len:19 al:1
.........................UUCAAUGUUAUCGGUUUGUaU............................................... len:21 al:5
.........................UUCAAUGUUAUCGGUUUu.................................................. len:18 al:1
.........................UUCAgUGUUAUCGGUUUGU................................................. len:19 al:3
.........................UUuAAUGUUAUCGGUUUGU................................................. len:19 al:1
.........................cUCAAUGUUAUCGGUUUGU................................................. len:19 al:2
.........................UUCAAUGUUAUCGGUUUGUUU............................................... len:21 al:7
.........................UUCAAUGUUAUCGGUUUGUa................................................ len:20 al:7
.........................UUCAAUGUUAUCGGUUUGa................................................. len:19 al:3
.........................UUCAAUGUUAUCGGUUUG.................................................. len:18 al:2
.........................UUCAAUGUUAUCGaUUUGU................................................. len:19 al:12
.........................UUCAAUGUUAUCGGUUUGUU................................................ len:20 al:124
.........................UUCAAUGUUAUCGGUUUGUg................................................ len:20 al:1
.........................UUCAAUGUUAUCGGUUUGUc................................................ len:20 al:6
.........................UUCAAUGcUAUCGGUUUGUU................................................ len:20 al:1
.........................UUCAAUGUUAUCGGUUUGUUa............................................... len:21 al:1
..........................UCAAUGUUAUCGGUUUGU................................................. len:18 al:10
..........................cCAAUGUUAUCGGUUUGU................................................. len:18 al:2
..........................UCAAUGUUAUCGGUUUGa................................................. len:18 al:1
..........................UCAAUGUUAUCGaUUUGU................................................. len:18 al:1
...........................CAAUGUUAUCGGUUUGUU................................................ len:18 al:1
............................AAUGUUAUCGGUUUGUUUAAuA........................................... len:22 al:1
.................................UAUCGGUUUGUUUuAAACGAAC...................................... len:22 al:1
..................................AUCGGUUUGUUUuAAACG......................................... len:18 al:1
................................................AACGAACCGAUAACAUUGAAGU....................... len:22 al:1
.................................................ACGAACCGAUAACAUUGAAGU....................... len:21 al:3
..................................................CGAACCGAUAcCAUUGAAGUUAA.................... len:23 al:1
..................................................CGAACCGAUAACAUUGAAGUUA..................... len:22 al:1
..................................................CGAACCGAUAACAUUGAAGUUAAA................... len:24 al:2
..................................................CGAACCGAUAACAUUGAAGU....................... len:20 al:6
...................................................GAACCGAUAACAUUGAAGa....................... len:19 al:2
...................................................GuACCGAUAACAUUGAAGU....................... len:19 al:1
...................................................GAACCaAUAACAUUGAAGUUA..................... len:21 al:3
...................................................GAACCGAUAcCAUUGAAG........................ len:18 al:1
...................................................GAACCGAUAgCAUUGAAGUU...................... len:20 al:1
...................................................GAACCGAUAACAUUGAAG........................ len:18 al:34
...................................................GAACCGAUAACAUUGAAGUUAAAA.................. len:24 al:1
...................................................GAACCGAUAACAUUGAAGc....................... len:19 al:8
...................................................GAACCGgUAACAUUGAAGU....................... len:19 al:1
...................................................GAACCGAUAACAUUGAAu........................ len:18 al:11
...................................................GAACCGAUAACAUUGAAGUUAAA................... len:23 al:9
...................................................GAACCGAUAACAUUGAgG........................ len:18 al:1
...................................................GAACCGAUAACAUUGAAGUUAA.................... len:22 al:5
...................................................GAACCGAUAACAUUGAAGUUA..................... len:21 al:4
...................................................GAACCGAUAcCAUUGAAGU....................... len:19 al:5
...................................................GAACCGAUAACAUUGAAGU....................... len:19 al:192
...................................................GAACCGAUAACgUUGAAG........................ len:18 al:1
...................................................GAACCGAUAACAUUGA.......................... len:16 al:3
...................................................GAACCGAUAACAUUGAAGUUAAAu.................. len:24 al:1
...................................................GAgCCGAUAACAUUGAAGU....................... len:19 al:1
...................................................GAACCGAUAgCAUUGAAGU....................... len:19 al:1
...................................................GAACCGAUAACAUUGAAGUU...................... len:20 al:5
...................................................GAACCGAUAACgUUGAAGU....................... len:19 al:1
...................................................GAACCGAUAACAUUGAA......................... len:17 al:3
...................................................GAACCGAUAACAUUGAAa........................ len:18 al:2
...................................................GAACCGAUAACAUUGAAc........................ len:18 al:1
.....................................................ACCGAUAcCAUUGAAGUUAAA................... len:21 al:1