Genome: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/F-Ptua/data/Pocillopora_meandrina_HIv1.assembly.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/F-Ptua/output/04-Ptua-sRNA-discovery-ShortStack/ShortStack_out/merged_alignments.bam
Location: Pocillopora_meandrina_HIv1___Sc0000000:818027-818120 plus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/F-Ptua/output/04-Ptua-sRNA-discovery-ShortStack/ShortStack_out/strucVis/Cluster_20.ps.pdf
Locus Name: Cluster_20
CCAUGUGUGCCUGUUGACCACAUGUUCUCUCUGCAGUAAGCAUGUUUUGACAUGCUUGCUGUAAAGAGAACUUGUAGUCAGUGGUAAAAGACAG
.......((((..(((((.(((.(((((((.((((((((((((((....)))))))))))))).))))))).))).))))).))))........ (-44.40)
CCAUGUGUGCCUGUUGACuAC......................................................................... len:21 al:5
CCAUGUGUGCCUGUUGACuACA........................................................................ len:22 al:103
.CAUGUGUGCCUGUUGACuACA........................................................................ len:21 al:29
..AUGUGUGCCUGUUGACuAC......................................................................... len:19 al:2
..AUGUGUGCCUGUUGACuACA........................................................................ len:20 al:36
..AUGUGUGCCUGUUGACuACAUGUUCU.................................................................. len:26 al:3
...UGUGUGCCUGUUGACuACA........................................................................ len:19 al:9
...UGUGUGCCUGUUGACuACAUGUUCU.................................................................. len:25 al:1
....GUGUGCCUGUUGACuACA........................................................................ len:18 al:13
....................CAUGUUCUCUCUGCAGUAAGC..................................................... len:21 al:4
.....................AUGcUCUCUCUGCAGUAAGC..................................................... len:20 al:1
.....................AUGUUCUCUCcGCAGUAAG...................................................... len:19 al:1
.....................AUGUUCUCUCUGCAGUAgGC..................................................... len:20 al:2
.....................cUGUUCUCUCUGCAGUAAGCAUG.................................................. len:23 al:1
.....................AUGUUCUCUCUGCAGUAAGCAUa.................................................. len:23 al:14
.....................AUGUUCUCUCUGCAGUAAaC..................................................... len:20 al:1
.....................AaGUUCUCUCUGCAGUAAGC..................................................... len:20 al:1
.....................AUGUUCUCUCUGCAGUAAGCA.................................................... len:21 al:10
.....................AUGUUCUCUCUGCAGUAAGCu.................................................... len:21 al:1
.....................AUGUUCUCUCUGCAGUAAGa..................................................... len:20 al:3
.....................AUGUUCUCUCUGuAGUAAGC..................................................... len:20 al:1
.....................AUGUUCUCUCUGCAGUAAGCAUaU................................................. len:24 al:1
.....................AUGUUCUCUCUGCAGUgAGC..................................................... len:20 al:2
.....................AUGUUCUCUCUGCAGUAAGu..................................................... len:20 al:23
.....................AUGUUCUCUCUGCAGUAAGCAUGUU................................................ len:25 al:8
.....................AUGUUCUCUCUGCAG.......................................................... len:15 al:1
.....................AUGUUCUCUCUGCAGUAAGCgUGU................................................. len:24 al:1
.....................AUGUUCUCUCUGCAGUAAGCAUGc................................................. len:24 al:1
.....................AUGUUCUCUCUGCAGUAAa...................................................... len:19 al:1
.....................AUGUUCUCUCUGCAGU......................................................... len:16 al:2
.....................AUGUcCUCUCUGCAGUAAGC..................................................... len:20 al:1
.....................AUGUUCUCUCUGCAGUAAGCAUu.................................................. len:23 al:7
.....................AUGUUCUCUCUGCAGUAAGCAUc.................................................. len:23 al:2
.....................AUGcUCUCUCUGCAGUAAGCAUG.................................................. len:23 al:1
.....................AUGUUCUCUCUGCAGUAAGCgUG.................................................. len:23 al:1
.....................AUGUUCUCUCUGCAGUAAGCAUGUc................................................ len:25 al:3
.....................AUGUUCUCUCUGCAGUAAGCAUcU................................................. len:24 al:1
.....................AUGUUCUCUCUGCAGUAAGCAUGU................................................. len:24 al:30
.....................AUGUUCUCUCUGCAGUAgG...................................................... len:19 al:1
.....................cUGUUCUCUCUGCAGUAAGCAUGUU................................................ len:25 al:2
.....................AUGUUCUCcCUGCAGUAAGC..................................................... len:20 al:1
.....................AUGUUCcCUCUGCAGUAAGCAUG.................................................. len:23 al:2
.....................AUGUUCUCUCUGCAGUAAGC..................................................... len:20 al:238
.....................AUGUUCUCUCUGCAGUcAGC..................................................... len:20 al:1
.....................AUGUUCUCUCUGCAGUAAGCAUG.................................................. len:23 al:85
.....................cUGUUCUCUCUGCAGUAAGCAUGU................................................. len:24 al:1
.....................AUGUUCUCUCUGCAGUAAGCAUuU................................................. len:24 al:1
.....................AUGUUCUCUCUGCAGUAAG...................................................... len:19 al:63
.....................AUGUUCUCUCUGCAGUAAGCAUGUUU............................................... len:26 al:1
.....................AUGUUCUCUCUGCAGUAAGCAU................................................... len:22 al:2
.....................AUGUUCcCUCUGCAGUAAGC..................................................... len:20 al:1
......................cGUUCUCUCUGCAGUAAG...................................................... len:18 al:2
......................UGUUCUCUCUGCAGUAAGCAUc.................................................. len:22 al:9
......................UGUUCUCUCUGCAGUAAGuA.................................................... len:20 al:1
......................UcUUCUCUCUGCAGUAAGCAUGUU................................................ len:24 al:3
......................UGUUCUCUCUGgAGUAAGCAUGU................................................. len:23 al:3
......................UGUUCcCUCUGCAGUA........................................................ len:16 al:1
......................UGUUCcCUCUGCAGUAAGC..................................................... len:19 al:3
......................UGUUCUCUaUGCAGUAAGC..................................................... len:19 al:1
......................UGUUuUCUCUGCAGUAAGCAUGUU................................................ len:24 al:2
......................UGUUCUCUCUGCAGUAAGCAUGUUc............................................... len:25 al:2
......................UGUUCUCUCUGCAGUAAGCAUG.................................................. len:22 al:7830
......................UGUUCUCUCUGCAGUcAGCAUGUU................................................ len:24 al:1
......................UGUUCUCUCUGCAGUAAGuAUGU................................................. len:23 al:67
......................UGUUCcCUCUGCAGUAAGCAUG.................................................. len:22 al:19
......................UGUUCUCUCUGCAGUAAGCAUGUUUU.............................................. len:26 al:10
......................UGUUCUCUuUGCAGUAAGC..................................................... len:19 al:1
......................UGUUCUCUCUGuAGUAAGCAUGU................................................. len:23 al:16
......................UGUUCUCUCUGCAGUAuGCAUGU................................................. len:23 al:4
......................UGUUCUCUCUuCAGUAAGCAUG.................................................. len:22 al:2
......................UGUUCUCUCUGCAGUAAGCg.................................................... len:20 al:1
......................UGUUCUuUCUGCAGUAAGCAUGU................................................. len:23 al:4
......................UGUUCUCUCgGCAGUAAGCAUGU................................................. len:23 al:1
......................UGUUCUCUCUGCAGUAuGCAUGUU................................................ len:24 al:1
......................UGUUCUCUCUGgAGUAAGCAUG.................................................. len:22 al:2
......................UGUUCUCUCUGCAGUAAuCAUGU................................................. len:23 al:4
......................UGUUCUCUCUGCAGUAAGCAU................................................... len:21 al:96
......................UGUUCUCUCUGCAGcAAGCAUGUU................................................ len:24 al:3
......................UGUUCUCUCUGCAGUAAGCAUGUc................................................ len:24 al:310
......................UGUUCUCUCUGCAuUAAGCAUGU................................................. len:23 al:1
......................UGUUCUCUCUGCAGUAcGCAUGUU................................................ len:24 al:2
......................UGUUCUCUCUGCAGUAAGCAUGgU................................................ len:24 al:56
......................UGUUCUCUCUGCAaUAAGCAUGU................................................. len:23 al:5
......................UGUUCUCUCUGCAGUc........................................................ len:16 al:1
......................UGUUCUCUaUGCAGUAAGCAUGU................................................. len:23 al:2
......................UGUUCUCUCUGCcGUAAGCAUGUU................................................ len:24 al:3
......................UGUUCUCUaUGCAGUAAGCAUG.................................................. len:22 al:1
......................UGUUCUCUCUGCAGUAAGCA.................................................... len:20 al:33
......................UGUUCUCUCUGCgGUAAG...................................................... len:18 al:4
......................UGUUCUCUCcGCAGUAAG...................................................... len:18 al:2
......................UGUUCUCUCUGCAGUAgGCAUG.................................................. len:22 al:47
......................UGUUCUCUCcGCAGUAAGCAUGU................................................. len:23 al:34
......................UGUUCUCUCUGCAGUAAGuAUG.................................................. len:22 al:19
......................UGUUCUCUCUGCAGUAAGCAgG.................................................. len:22 al:5
......................UGUUCUCUuUGCAGUAAGCAUGUU................................................ len:24 al:1
......................UGUaCUCUCUGCAGUAAGCAUG.................................................. len:22 al:2
......................UGUUCUCUCUGCgGUAAGC..................................................... len:19 al:2
......................UGUUCUCUCUGCAGUAAGCuUG.................................................. len:22 al:3
......................UGUUCUCUCUGCAGUAAGaAUGU................................................. len:23 al:1
......................UGUUCcCUCUGCAGUAAGCAUGUU................................................ len:24 al:15
......................UGUUCUCUCUGCAGUAAGCAUaU................................................. len:23 al:209
......................UGUUCUaUCUGCAGUAAGCAUG.................................................. len:22 al:1
......................UGUUCUCUCUGCcGUAAGCAUG.................................................. len:22 al:9
......................UGUUCUCUCUGCuGUAAGCAUG.................................................. len:22 al:2
......................UGUUCUCUCUGCAGUAAGCAgGU................................................. len:23 al:3
......................UGUaCUCUCUGCAGUAAGCAUGU................................................. len:23 al:3
......................UaUUCUCUCUGCAGUAAGCAUG.................................................. len:22 al:6
......................UGUcCUCUCUGCAGUAAGC..................................................... len:19 al:3
......................UGgUCUCUCUGCAGUAAGCAUGUU................................................ len:24 al:1
......................UGUUCUCUCUGCAGUAAGCuUGU................................................. len:23 al:21
......................UGUUCUCUCUGCAGUAAGCgU................................................... len:21 al:3
......................UGUUCUCUCUGCAaUAAGCAUGUU................................................ len:24 al:4
......................UGUUCUCgCUGCAGUAAGCAUGUU................................................ len:24 al:1
......................UGUUCUCUCUGaAGUAAGCAUGU................................................. len:23 al:2
......................UGUUCUCUCaGCAGUAAGCAUG.................................................. len:22 al:1
......................UGUUCUCUCaGCAGUAAGC..................................................... len:19 al:1
......................UGUUCUCUCaGCAGUAAGCAUGU................................................. len:23 al:4
......................UGUUCUCUCUGCAGUAAGCcUG.................................................. len:22 al:3
......................UGUcCUCUCUGCAGUAAGCAUGU................................................. len:23 al:37
......................UGUUCUCUCUGCAGcAAGCAUG.................................................. len:22 al:6
......................UGUUCgCUCUGCAGUAAGCAUGU................................................. len:23 al:1
......................UuUUCUCUCUGCAGUAAGCAUGUU................................................ len:24 al:2
......................UGUUCUCUCaGCAGUAAGCAUGUU................................................ len:24 al:1
......................cGUUCUCUCUGCAGUAAGCAUGU................................................. len:23 al:51
......................UGUUCUCUCUGCAGUAgGCAUGUUU............................................... len:25 al:2
......................UGUUCUCUCUGCAGUAAGCAUGg................................................. len:23 al:65
......................UGUUCUCUCUGCAGUgAG...................................................... len:18 al:2
......................UGUUuUCUCUGCAGUAAGCAUGU................................................. len:23 al:3
......................UGUUaUCUCUGCAGUAAGCAUG.................................................. len:22 al:1
......................UGUUCUCUCUGCAGUgAGCAUG.................................................. len:22 al:15
......................UGUUCUCUCUGCAGUAcGCAUGU................................................. len:23 al:7
......................UGUUCUCUCUGCAGUcAGCAUG.................................................. len:22 al:3
......................UGgUCUCUCUGCAGUAAGCAUGU................................................. len:23 al:3
......................UGUUCUCUCUGCAGUAAGCAUuU................................................. len:23 al:5
......................UGUUCUCUCUGCAGUAAGCAcGUU................................................ len:24 al:10
......................UGUUCUCUCUGCAGUAAGCAUcU................................................. len:23 al:4
......................UGUUCUCUCcGCAGUAAGC..................................................... len:19 al:4
......................aGUUCUCUCUGCAGUAAGCAUG.................................................. len:22 al:18
......................aGUUCUCUCUGCAGUAAGCAUGU................................................. len:23 al:24
......................UGUUCUCUCUGgAGUAAGCAUGUU................................................ len:24 al:1
......................gGUUCUCUCUGCAGUAAGCAUGUU................................................ len:24 al:1
......................UGUUCUCUCUGCAGUcAGCAUGU................................................. len:23 al:1
......................UGUUCUCUCUGCAGUAAGCAUaUU................................................ len:24 al:1
......................UGcUCUCUCUGCAGUAAG...................................................... len:18 al:1
......................UGUUCUCcCUGCAGUAAGCAUGUU................................................ len:24 al:14
......................UGUUCUCUCUGCAGUA........................................................ len:16 al:35
......................UGUUCUCUCUGCAGcAAGCAUGU................................................. len:23 al:23
......................UGUUCUCUCUGCAGUAgGCAUGU................................................. len:23 al:38
......................UGUUCaCUCUGCAGUAAGCAUGUU................................................ len:24 al:1
......................UGUUCUCUCUGCAGUAgGC..................................................... len:19 al:3
......................UGUUCUCUCUGCAGUAAu...................................................... len:18 al:1
......................UGUUCUCUCUGCAGUAAGCAUGUUaU.............................................. len:26 al:1
......................UGUUCUCUCUGCAGUAAGCAUGUUU............................................... len:25 al:27
......................UGUUCUCcCUGCAGUAAGCAUG.................................................. len:22 al:9
......................UGUUCUCUuUGCAGUAAGCAUG.................................................. len:22 al:5
......................aGUUCUCUCUGCAGUAAG...................................................... len:18 al:1
......................UGUUCUCUCcGCAGUAAGCAUGUU................................................ len:24 al:17
......................UaUUCUCUCUGCAGUAAGCAUGUU................................................ len:24 al:2
......................UGUUCUCaCUGCAGUAAGCAUGU................................................. len:23 al:2
......................UGUUCUCUCUGCAaUAAGCAUG.................................................. len:22 al:6
......................UGUUCUCUCUGCAGUAAGCAUu.................................................. len:22 al:20
......................UGUUCUCUCUGCAGUAAGCAUGU................................................. len:23 al:11434
......................UGUUCUCUCUGCAGUAAaCAUGUU................................................ len:24 al:3
......................UGUUCUCUCUGCAGUuAGCAUG.................................................. len:22 al:2
......................UGUUCUCUCUGCgGUAAGCAUGUU................................................ len:24 al:14
......................UGUUCUCUCUGCAGUAAGCAUGUa................................................ len:24 al:210
......................UGUUCUCUCUGCAGUAAG...................................................... len:18 al:295
......................UGcUCUCUCUGCAGUAAGC..................................................... len:19 al:7
......................UGUUCUCUCUGCgGUAAGCAUGU................................................. len:23 al:32
......................UGUUCUuUCUGCAGUAAGCAUG.................................................. len:22 al:3
......................UGUUCUCUCUGCAGUAAGCAcGU................................................. len:23 al:24
......................UGUUCUCUCUGCAGcAAGC..................................................... len:19 al:2
......................UGUUCUCUCUGCAGUAAGCAUa.................................................. len:22 al:378
......................aGUUCUCUCUGCAGUAAGCAUGUU................................................ len:24 al:12
......................UGUUCUCUCUGCAGUAAGCAUGUUgU.............................................. len:26 al:1
......................UGUUCUCUCUGCAGUAA....................................................... len:17 al:1
......................UGcUCUCUCUGCAGUAAGCAUGUU................................................ len:24 al:12
......................UGUUCUCUCUGCAGUAAGCAUGcU................................................ len:24 al:12
......................UGUUCUCUuUGCAGUAAGCAUGU................................................. len:23 al:4
......................gGUUCUCUCUGCAGUAAGCAUG.................................................. len:22 al:1
......................UGUUCUCUCUGCAGaAAGCAUG.................................................. len:22 al:1
......................UGUUCUCUCUGCcGUAAGCAU................................................... len:21 al:1
......................UGUUCUCUCUGCuGUAAGCAUGUU................................................ len:24 al:2
......................UGUgCUCUCUGCAGUAAGCAUGU................................................. len:23 al:1
......................UGUcCUCUCUGCAGUAAGCAU................................................... len:21 al:1
......................UGUUCUCUCUGCcGUAAGC..................................................... len:19 al:1
......................UGUUCUCUCUGCAGUcAGC..................................................... len:19 al:1
......................UGUUCaCUCUGCAGUAAGCAUGU................................................. len:23 al:2
......................UGUUCUCgCUGCAGUAAGCAUG.................................................. len:22 al:2
......................UGUUCUCUCUGCAGUAAGCAUGUaU............................................... len:25 al:17
......................UGUUCUCcCUGCAGUAAGCAUGU................................................. len:23 al:26
......................UGUUCUCUCUGCAGUAAGCAUGc................................................. len:23 al:1153
......................UGUUCUCUCUGCAGUgAGCAUGU................................................. len:23 al:14
......................UGUUCUCUCUGCAGUAAGCAUGUgU............................................... len:25 al:4
......................UGUUCUCUCUGCAGUAAa...................................................... len:18 al:6
......................UGUUCUuUCUGCAGUAAGC..................................................... len:19 al:1
......................UGUUCUCUCUGCAGUAAaC..................................................... len:19 al:3
......................UGUUCUCUCUGCAcUAAGCAUG.................................................. len:22 al:1
......................UGUUCUCUCUGCAGUAAGCAaG.................................................. len:22 al:1
......................UGUUCUCUCcGCAGUAAGCAUG.................................................. len:22 al:33
......................UGUUCaCUCUGCAGUAAGCA.................................................... len:20 al:2
......................UGcUCUCUCUGCAGUAAGCAUG.................................................. len:22 al:25
......................UGUUCUCUCUGCAGUAAGCAUGaU................................................ len:24 al:25
......................UGUUCUCUCUGCAGUAAGa..................................................... len:19 al:13
......................UGUUCUCUCUGCAGUAAGCAUGa................................................. len:23 al:102
......................UGUUCUCUCUGCAGUAgGCAUGUUUU.............................................. len:26 al:1
......................UGUUCUCUCUGCAGUAuGCAUG.................................................. len:22 al:1
......................UGUUCUCUCUGCAGUAAGCgUGU................................................. len:23 al:28
......................UGUUCUaUCUGCAGUAAG...................................................... len:18 al:1
......................UGcUCUCUCUGCAGUAAGCAUGU................................................. len:23 al:39
......................UGUUCUCUCUGCgGUAAGCAUG.................................................. len:22 al:24
......................UaUUCUCUCUGCAGUAAGCAUGU................................................. len:23 al:14
......................UGUUCUCUCUGCAGUAcGCAUG.................................................. len:22 al:4
......................cGUUCUCUCUGCAGUAAGC..................................................... len:19 al:2
......................UGUUCUCUCUGCcGUAAGCAUGU................................................. len:23 al:6
......................UGUUCUCUCUGCAGUAAGCAcG.................................................. len:22 al:38
......................UGUcCUCUCUGCAGUAAGCAUGUU................................................ len:24 al:13
......................UGUUCUCUCUGCAGUAAGCAUGUUUUG............................................. len:27 al:1
......................UGUUCUCUCUaCAGUAAGCAUGUU................................................ len:24 al:7
......................UGUUCUCUCUGCAGUAgGCAUGUU................................................ len:24 al:22
......................UGUUCUCUCUGuAGUAAGCAUG.................................................. len:22 al:11
......................UGUUCcCUCUGCAGUAAGCAUGU................................................. len:23 al:39
......................UGUUuUCUCUGCAGUAAGCAUG.................................................. len:22 al:2
......................UGUUCUCUCUuCAGUAAGCAUGU................................................. len:23 al:1
......................UGUUCUCcCUGCAGUAAGC..................................................... len:19 al:3
......................UGUUCUCUCUGCAGUAAGCAUGUgUU.............................................. len:26 al:1
......................UGUcCUCUCUGCAGUAAGCAUG.................................................. len:22 al:40
......................UGUUCUCUCUGCAGUAAGCAUGUg................................................ len:24 al:16
......................UGUUCUCUCUGCAGU......................................................... len:15 al:18
......................UGUUCUCUCUGCAGUAAaCAUGU................................................. len:23 al:4
......................UGUUCUCcCUGCAGUAAGCAU................................................... len:21 al:1
......................UGUUCUCUCUGCAGUAAGgAUGU................................................. len:23 al:1
......................UGUUCUCUCUGCAGUAAGCcUGU................................................. len:23 al:2
......................UGUUCUCUCUGCAGUAAGC..................................................... len:19 al:996
......................UGUUCcCUCUGCAGUAAG...................................................... len:18 al:1
......................UuUUCUCUCUGCAGUAAGCAUGU................................................. len:23 al:4
......................UGUUCUCaCUGCAGUAAG...................................................... len:18 al:1
......................UGUUCUCUCUGCAGUAAGCgUG.................................................. len:22 al:15
......................UGUUCUCUCUGCAGUAAGCgUGUU................................................ len:24 al:11
......................cGUUCUCUCUGCAGUAAGCAUG.................................................. len:22 al:27
......................UGUUCUCUCUGCAGUAAaCAUG.................................................. len:22 al:5
......................UGUUCUCUCUGCAGUAAcCAUG.................................................. len:22 al:1
......................UGUUCUCUCUGCAGUAAcCAUGU................................................. len:23 al:1
......................UGUUCUCUCUaCAGUAAGCAUGU................................................. len:23 al:11
......................UGUUCUCUCUGCAGUAAGu..................................................... len:19 al:94
......................UGUUCUCUCUGuAGUAAGCAUGUU................................................ len:24 al:3
......................UGUUCUCUCUGCAGUAAGCAaGUU................................................ len:24 al:1
......................UGUUCUCUCUGCAGUAAGCAa................................................... len:21 al:2
......................UGUUCUCUCUGaAGUAAGCAUG.................................................. len:22 al:1
......................UGUUCUCUCUGCAGUAAGCAaGU................................................. len:23 al:1
......................UGUUCUCUCUGCAGUAAGCAUGUaUU.............................................. len:26 al:14
......................UGUUCUCUCUGCAGUAAGCAUGUU................................................ len:24 al:4264
......................UGUUCaCUCUGCAGUAAGCAUG.................................................. len:22 al:5
......................UGUUCUCUCUGCAGUAAGuAUGUU................................................ len:24 al:6
......................UGUUCUCUCUaCAGUAAGCAUG.................................................. len:22 al:9
......................cGUUCUCUCUGCAGUAAGCAUGUU................................................ len:24 al:18
......................UGUUCUCUCUGCAGUAAGCAc................................................... len:21 al:6
......................UGUUCUCUCUGCAGUgAGCAUGUU................................................ len:24 al:7
......................UGUaCUCUCUGCAGUAAGC..................................................... len:19 al:1
.......................GUUCUCUCUGCAGUAAGCAUGU................................................. len:22 al:7
.......................GUUCUCUCUGCAGUAAGC..................................................... len:18 al:2
.......................GUUCUCUCUGCAGUAAGCAUGUU................................................ len:23 al:1
.......................GUUCUCUCUGCAGUAAGCAUG.................................................. len:21 al:5
........................UUCUCUCUGCAGUAAGCAUGUU................................................ len:22 al:2
........................UUCUCUCUGCAGUAAGCAUGc................................................. len:21 al:1
........................UUCUCUCUGCAGUAAGCAUGU................................................. len:21 al:6
........................UUCUCUCUGCAGUAAGuAUG.................................................. len:20 al:1
........................UUCUCUCUGCAGUAAGCAUa.................................................. len:20 al:1
........................UUCUCUCUGCAGUAAGCAUG.................................................. len:20 al:5
.........................UCUCUCUGCAGUAAGuAUGU................................................. len:20 al:1
.........................UCUCUCUGCAGUAgGCAUGU................................................. len:20 al:2
.........................UCUCUCUGCAGUAAGCAUa.................................................. len:19 al:2
.........................UCUCUCUGCAGUAAGCAUG.................................................. len:19 al:9
.........................UCUCUCUGCAGUAAGCAUGc................................................. len:20 al:6
.........................UCUCUCUGCAGUAAaCAUGU................................................. len:20 al:1
.........................UCUCUCUGCAGUAAGCAUu.................................................. len:19 al:1
.........................UCcCUCUGCAGUAAGC..................................................... len:16 al:1
.........................UCUCUCUGCAGUAAGCAUaU................................................. len:20 al:6
.........................UCUCUCUGCAGUAAGCAUGUc................................................ len:21 al:3
.........................UCUCUuUGCAGUAAGCAUGU................................................. len:20 al:1
.........................UCUCUCUGCAGUAAGCAUGa................................................. len:20 al:1
.........................UCUCUCUGCAGUAAGCAUGUU................................................ len:21 al:13
.........................UCUCUCUGCAGUAAGuAUG.................................................. len:19 al:2
.........................UCUCUCUGCAGUAAGCAUGUUUU.............................................. len:23 al:1
.........................UCUCUCUGCgGUAAGCAUGU................................................. len:20 al:1
.........................UCUCUCUGCAGUAAGCAUGg................................................. len:20 al:1
.........................cCUCUCUGCAGUAAGCAUGU................................................. len:20 al:1
.........................UCUCUCUGCAGUAAGCAUGU................................................. len:20 al:130
.........................UCUCUCUGCAGUAAGCAcGU................................................. len:20 al:1
.........................UCUCcCUGCAGUAAGCAUG.................................................. len:19 al:1
.........................UCcCUCUGCAGUAAGCAUGU................................................. len:20 al:1
.........................UCUCUCUGCAGUAAGCAU................................................... len:18 al:4
.........................UCUCUCUGCAGUAAGu..................................................... len:16 al:2
..........................CUCUCUGCAGUAAGCAUGU................................................. len:19 al:3
..........................CUCUCUGCAGUAAGCAUG.................................................. len:18 al:3
..........................CUCUCUGCAGUAAGCAUGUU................................................ len:20 al:1
...........................UCUCUGCAGUAAGCAUGUc................................................ len:19 al:1
.............................................UUUGACAUGCUUGCUGUAAAGAGAACUUG.................... len:29 al:2
..................................................CAUGCUUGCUGUAAAGAGAACUUG.................... len:24 al:1
...................................................AUGCUUGCUGUAgAGAGAACUUG.................... len:23 al:72
...................................................AUGCUUGCUGUAAuGAGAACUUG.................... len:23 al:2
...................................................AUGCUUGCUGUAAAGAGAACcUGU................... len:24 al:1
...................................................AUGCUUGCUGUAAAcAGAACUUG.................... len:23 al:1
...................................................AUGCUUGCUGUAAAGAGAACUUGUAu................. len:26 al:4
...................................................AUGCUUGuUGUAAAGAGAACUUG.................... len:23 al:8
...................................................AUGCUUGCUGUAgAGAGAACUU..................... len:22 al:1
...................................................AUGCUUGCUGUAAAGAaAACUUG.................... len:23 al:1
...................................................AUGCUUGCUGUAAAGAGAACUUGc................... len:24 al:17
...................................................AUGCUUGCUGUAAAGAGAACa...................... len:21 al:5
...................................................AUGCUUGCcGUAAAGAGAACUU..................... len:22 al:1
...................................................AUGCUUGCUGUAAAGAGAACc...................... len:21 al:5
...................................................AaGCUUGCUGUAAAGAGAACUUG.................... len:23 al:1
...................................................AUGCUUGCUGUAAAGAGAACUc..................... len:22 al:5
...................................................AUGCUUGCUGUAgAGAGAACU...................... len:21 al:3
...................................................AUGCUUGCUGUAAcGAGAACUUG.................... len:23 al:2
...................................................AUGCUUGCUGUAgAGAGA......................... len:18 al:2
...................................................AUGCcUGCUGUAAAGAGAACUUG.................... len:23 al:11
...................................................AUGCUUGCUGUAAAGAGAgCUUG.................... len:23 al:12
...................................................AUGCUUGCUGUAAAGAGAACUUaU................... len:24 al:3
...................................................AUGCUUGCUGUAAAGAGAACaU..................... len:22 al:1
...................................................AUGCgUGCUGUAAAGAGAACUUG.................... len:23 al:1
...................................................AUGCUUGCUGUAgAGAGAACUUGU................... len:24 al:6
...................................................AUGCUUGCUGaAAAGAGAACUUG.................... len:23 al:1
...................................................AUGCUUGCUGUAAAGAGAAuUUGU................... len:24 al:1
...................................................AUGCUUGCUGUAAAGAGAACUUGUAaU................ len:27 al:1
...................................................AUGCUUaCUGUAAAGAGAACUUG.................... len:23 al:2
...................................................AUGCUUGCUGUAuAGAGAACUUG.................... len:23 al:1
...................................................AUGCUUGCUGUAAAGAGAAuUUG.................... len:23 al:5
...................................................AUGCUgGCUGUAAAGAGAACUUGU................... len:24 al:1
...................................................AUGCUUGCUGUAAAGAGAgCUUGU................... len:24 al:2
...................................................gUGCUUGCUGUAAAGAGAACUUGU................... len:24 al:1
...................................................AUGCUUGCUGUAAAGAGAACUUc.................... len:23 al:2
...................................................AUGCUUGCUGUAAAGAGAACUUGU................... len:24 al:206
...................................................AUaCUUGCUGUAAAGAGAACUUG.................... len:23 al:4
...................................................AUGCUcGCUGUAAAGAGAACUUG.................... len:23 al:12
...................................................AUGCUUGCUGUAAAGAGAACUUGUc.................. len:25 al:3
...................................................gUGCUUGCUGUAAAGAGAACU...................... len:21 al:1
...................................................AUGCUUGCUGUAcAGAGAACUUG.................... len:23 al:4
...................................................AUGCUUGCUGUAAAGAGuACUUG.................... len:23 al:3
...................................................AUGCUUGCUGUAAAGAGAACgU..................... len:22 al:4
...................................................cUGCUUGCUGUAAAGAGAACUUG.................... len:23 al:3
...................................................AUGCUUGCUGcAAAGAGAACUUG.................... len:23 al:5
...................................................cUGCUUGCUGUAAAGAGAACUUGU................... len:24 al:1
...................................................AUGCUUGCcGUAAAGAGAACUUG.................... len:23 al:10
...................................................AUGCUUGCUGUAAAGAGcACUUG.................... len:23 al:1
...................................................AUGCUaGCUGUAAAGAGAACUU..................... len:22 al:1
...................................................AUGCUUGCUGUAAgGAGAACUUGU................... len:24 al:4
...................................................AUGCUUGCUGUAAAGAGAACg...................... len:21 al:1
...................................................gUGCUUGCUGUAAAGAGAACUUGUA.................. len:25 al:1
...................................................gUGCUUGCUGUAAAGAGAACUUG.................... len:23 al:11
...................................................AUGCUUGCUGUAAgGAGAACU...................... len:21 al:1
...................................................AUGCUUGCcGUAAAGAGAACUUGUA.................. len:25 al:1
...................................................AUGCUUGCUGUAAAGAGAACUgG.................... len:23 al:1
...................................................AUGCUUGCUGUAAAGAGA......................... len:18 al:12
...................................................AUGCUUGCUGUAAAGAGAACUUu.................... len:23 al:35
...................................................AUGCUUGCUGUAAgGAGAACUU..................... len:22 al:3
...................................................AUGCaUGCUGUAAAGAGAACUU..................... len:22 al:1
...................................................AUGCUUGCUGUAAAGcGAACUUG.................... len:23 al:2
...................................................AUGCUUGCUGUAAAGAGAACUcG.................... len:23 al:4
...................................................gUGCUUGCUGUAAAGAGAACUU..................... len:22 al:2
...................................................AUGCUUGCUGUAAAGAGAACUUuU................... len:24 al:2
...................................................AUGCUUGCUGUAAAGAGAA........................ len:19 al:2
...................................................AcGCUUGCUGUAAAGAGAACUUG.................... len:23 al:6
...................................................AUGCUUGCUGUAAAGAGAACUUGa................... len:24 al:41
...................................................AUGCUUGCUGUAAgGAGAACUUG.................... len:23 al:25
...................................................AUGCUUGCUaUAAAGAGAACUUG.................... len:23 al:2
...................................................AUGCUUGCUGUAAAGAGAACUUGUAc................. len:26 al:1
...................................................AUGCUUGCUGUAAAGgGAACUUGU................... len:24 al:2
...................................................AUGCUUGCUGUAAAGAGAACgUG.................... len:23 al:1
...................................................AUGCUUGCUGUcAAGAGAACUUG.................... len:23 al:1
...................................................AUGCUUGCUGUgAAGAGAACUUG.................... len:23 al:9
...................................................AUGCUUGCUGUAAAGAGAACUUa.................... len:23 al:123
...................................................AUGCUUGCUGUAAAGAGuACUU..................... len:22 al:1
...................................................AUGCUUGCUGUAAAGAGAACUUGUu.................. len:25 al:41
...................................................AUGCUUGCUGUAAAGAGAACUUGUA.................. len:25 al:28
...................................................AUGCUUuCUGUAAAGAGAACUUG.................... len:23 al:2
...................................................AUGCUUGCUGUAAAGAGAAC....................... len:20 al:11
...................................................cUGCUUGCUGUAAAGAGAACUU..................... len:22 al:1
...................................................AUGCUUGCUGUAAAGAGAACUUG.................... len:23 al:3772
...................................................AUGCUUGCUGUAAAGgGAACUUG.................... len:23 al:16
...................................................AUGCUUGCUGUAAAGAGAACcUG.................... len:23 al:7
...................................................AUGCUUGCUGUAAAG............................ len:15 al:2
...................................................AUGCaUGCUGUAAAGAGAACUUG.................... len:23 al:1
...................................................AUGCUUGCUGUAAAGAGAACUU..................... len:22 al:141
...................................................AUGCUUGCUGUAAAGAGgACUUG.................... len:23 al:13
...................................................AUGCUUGCUGUAAAGAGAACU...................... len:21 al:51
....................................................UGCUUGCUGUAgAGAGAACU...................... len:20 al:2
....................................................UGCUUGCUGUAAAGAGAACUUaU................... len:23 al:1
....................................................UGCUUGCUGUAAAGAGAACUUGa................... len:23 al:2
....................................................UGCUUGCUGUAcAGAGAACUUGU................... len:23 al:1
....................................................UGCcUGCUGUAAAGAGAACUUGU................... len:23 al:1
....................................................UGCUUGCUGUgAAGAGAACUUG.................... len:22 al:2
....................................................UGCUUGCUGUAAAGAGAACUUGUu.................. len:24 al:27
....................................................UGCUUGCUGUAAAGAGAACUU..................... len:21 al:3
....................................................UGCUUGCUGUAAAGAGAACUUGUAuU................ len:26 al:2
....................................................UGCUUGCUGUAAAGAGAACUUG.................... len:22 al:28
....................................................UGCUUGCUGUAAAGAGAACUUu.................... len:22 al:2
....................................................UGCUUGCUGUAAAGAGAACUUGU................... len:23 al:164
....................................................UGCUUGCUGcAAAGAGAACUUG.................... len:22 al:1
....................................................UGCUUaCUGUAAAGAGAACUUG.................... len:22 al:1
....................................................UGCUaGCUGUAAAGAGAACUUG.................... len:22 al:1
....................................................UGCUUGCUGUAAAGAGAACUUGUc.................. len:24 al:1
....................................................UGCUUGCUGUAAAGAGAACUUGc................... len:23 al:10
....................................................UGCUUGCUGUAAAGgGAACUUGU................... len:23 al:3
....................................................cGCUUGCUGUAAAGAGAACUUGU................... len:23 al:3
....................................................UGCUUGCUGUAAAGAGAA........................ len:18 al:1
....................................................UGCUUGCUGUAAAGAGAACUUGUA.................. len:24 al:7
....................................................UGCUUGCUGUAAAGAGAACU...................... len:20 al:12
....................................................UGCUUGCUGUAgAGAGAACUUGU................... len:23 al:2
.....................................................GCUUGCUGUAAAGAGAACUUGc................... len:22 al:4
.....................................................GCUUGCUGUAAAGAGAACUUu.................... len:21 al:2
.....................................................GCUUGCUGUAAAGAGAACUUG.................... len:21 al:20
.....................................................GCUUGuUGUAAAGAGAACUUG.................... len:21 al:1
.....................................................GCUUGCUGUAAAGAGAACUUGUAu................. len:24 al:1
.....................................................GCUUGCUGUAAAGAGAAuUUGU................... len:22 al:1
.....................................................GCUUGCUGUAAAGAGAACUUGUu.................. len:23 al:10
.....................................................aCUUGCUGUAAAGAGAACUUGU................... len:22 al:1
.....................................................GCUUGCUGUAAgGAGAACUUGUA.................. len:23 al:1
.....................................................GCUUGCUGUAAAGAGAACUUaU................... len:22 al:1
.....................................................cCUUGCUGUAAAGAGAACUUGU................... len:22 al:1
.....................................................GCUUGCUGUAAAGAGAACUUGg................... len:22 al:1
.....................................................GCUUGCUGUAAAGAGAACUUGUAGUCAcUG........... len:30 al:1
.....................................................GCUUGCUGcAAAGAGAACUUGU................... len:22 al:1
.....................................................aCUUGCUGUAAAGAGAACUUGUA.................. len:23 al:1
.....................................................GCUUGCUGUAgAGAGAACUUGU................... len:22 al:2
.....................................................GCUUGCUGUAAAGAGAACUUGU................... len:22 al:46
.....................................................GCUUGCUGUAAAGAGAACUU..................... len:20 al:2
.....................................................GCUUGCUGUAAAGAGAACUUGUA.................. len:23 al:15
.....................................................GCUUGCUGUAAAGAGAACUUa.................... len:21 al:3
.....................................................GCUUGCUGUgAAGAGAACUUGU................... len:22 al:1
.....................................................GCUUGCUGUAAAGAGgACUUGUA.................. len:23 al:1
.....................................................GCUUGCUGUAAAGAGAAC....................... len:18 al:3
......................................................CUUGCUGUAgAGAGAACUUGU................... len:21 al:1
......................................................CUUGCUGUAAAGAGAACUUGUA.................. len:22 al:7
......................................................CUUGuUGUAAAGAGAACUUGUA.................. len:22 al:1
......................................................CUUGCUGUAAAGAGAACUUG.................... len:20 al:8
......................................................CUUGCUGUAAAGAGAACUUGUu.................. len:22 al:2
......................................................CUUGCUGUAAAGAGAACUUGU................... len:21 al:15
......................................................CUUGCUGcAAAGAGAACUUG.................... len:20 al:1
......................................................CUUGCUGUAgAGAGAACUUGUA.................. len:22 al:1
......................................................CUUGCUGUAAAGAGAACUU..................... len:19 al:1
......................................................CUUGCcGUAAAGAGAACUUGU................... len:21 al:1
.......................................................UUGCUGUAAAGAGAACUUGUu.................. len:21 al:1
.......................................................UUGCUGUAAAGAGAACUUG.................... len:19 al:2
.......................................................UUGCcGUAAAGAGAACUUGU................... len:20 al:1
.......................................................UUGCUGUAAAGAGAACUUGc................... len:20 al:1
.......................................................UUGCUGUAAAGAGAACUUGU................... len:20 al:20
.......................................................UUGCUGUAAAGAGAACUUaU................... len:20 al:1
.......................................................UUGuUGUAAAGAGAACUUGU................... len:20 al:1
........................................................UGCUGUAAAGAGAACUUGUu.................. len:20 al:1
........................................................UGCUGUAAAGAGAACUUu.................... len:18 al:1
........................................................UGCUGUAAAGAGAACUUG.................... len:18 al:3
................................................................AGAGAACUUGUAGUCAcUGGUAAAA..... len:25 al:1
...................................................................GAACUUGUAGUCAcUGGUAAAAGACA. len:26 al:1