Genome: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/E-Peve/data/Porites_evermanni_v1.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/E-Peve/output/08-Peve-sRNA-discovery-ShortStack/ShortStack_out/merged_alignments.bam
Location: Porites_evermani_scaffold_47:475972-476066 minus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/E-Peve/output/08-Peve-sRNA-discovery-ShortStack/ShortStack_out/strucVis/Cluster_981.ps.pdf
Locus Name: Cluster_981
GUGGUUUCUUUUUCGUUGUUCCUUUCUUCUGAAAUAAUAAUUAUUUAGUAAUAAUUAUAUCAGAAGGAAGAAGACAAAGAAAGAGACAAGAAUCU
...((((((((((..(((((.(((((((((((.(((((.(((((...))))).))))).)))))))))))..)))))))))))))))........ (-30.60)
.UGGUUUCUUUUUCGUUGUU........................................................................... len:19 al:14
.UGGUUUCUUUUUCGUUGUc........................................................................... len:19 al:2
...................UCCUUUCUUCUGAAAUAAcAAUUAUUUAGU.............................................. len:30 al:2
...................UCCUUUCUUCUGAAAUAAUAAUUu.................................................... len:24 al:9
...................UCCUUUCUUCcGAAAUAAUAAUU..................................................... len:23 al:1
...................UCCUUUCUUCUGAAAUAAUAAUUAUUUAGc.............................................. len:30 al:3
...................UCCUUUCUUCUGAAAUAAUAu....................................................... len:21 al:1
...................UCCUUUCUUCUGAAAUAAUAAUUAUUU................................................. len:27 al:5
...................UCCUUUCUUCUGAAAUAAUAAUUc.................................................... len:24 al:1
...................UCCUUUCUUCUGAAAUAAUAAUUA.................................................... len:24 al:6
...................UCCUUUCUUCUGAAAUAAUAAUc..................................................... len:23 al:3
...................UCCUUUCUUCUGAAAUAAUAAUU..................................................... len:23 al:35
...................UCCUUUCUUCUGAgAUAAUAAUUA.................................................... len:24 al:1
...................UCCUUUCUUCUGAAAUAAUAAUUAUUUAGU.............................................. len:30 al:23
...................UCCUUUCUUCUGAAAUAAc......................................................... len:19 al:1
...................UCCUUUCUUCUGAAAUAAU......................................................... len:19 al:6
....................CCUUUCUUCUGAAAUAAU......................................................... len:18 al:2
....................CCUUUCUUCUGAAAUAAUAAUU..................................................... len:22 al:44
....................CCUUUCUUCUGAAAUAAUAAUUAc................................................... len:24 al:1
....................CCUUUCUUCUGAAAUAAUAAUUAUa.................................................. len:25 al:1
....................CCUUUCUUCUGAAAUAAUAAUUAUUUA................................................ len:27 al:1
....................CCUUUCUUCUGAAAUAAUAAUUAUUUAGUA............................................. len:30 al:1
....................CCUUUCUUCUGAAAUAAUAAUUAU................................................... len:24 al:6
....................CCUUUCUUCUGAAAUAAUAAUUAUUUAGUAu............................................ len:31 al:2
....................CCUUUCUUCUGAAAUAAUAAUUAUUUAGc.............................................. len:29 al:5
....................CCUUUCUUCUGAAAcAAUAAUUA.................................................... len:23 al:1
....................CCUcUCUUCUGAAAUAAUAAUUA.................................................... len:23 al:1
....................CCUUUCUUCUGAAAUAAUAAU...................................................... len:21 al:5
....................CCUUUCUUCUGAAAUAAUAAg...................................................... len:21 al:1
....................CCUUUCUUCUGAAAUAAUAAUc..................................................... len:22 al:2
....................uCUUUCUUCUGAAAUAAU......................................................... len:18 al:1
....................CCUUUCUUCUGAAAUAAUAAUUAUUUAGU.............................................. len:29 al:52
....................CCUUUCUUCUGAAAUAAUAAUUA.................................................... len:23 al:31
....................CCcUUCUUCUGAAAUAAUAAUUAUUUAGU.............................................. len:29 al:1
........................UCUUCUGAAAUAAUAAUU..................................................... len:18 al:1
...........................................UUUAGUAAUAAUUAUAUCAGAAGGAAGAAGA..................... len:31 al:4
...........................................UUUAGUAAUAAUUAUAUCAGuAGGAAGAAGA..................... len:31 al:1
............................................cUAGUAAUAAUUAUAUCAGAAGGAAGAAGA..................... len:30 al:1
..............................................AGUAAUAAUUAUAUCAGAAGGAAGAAGA..................... len:28 al:1
...............................................GUAAUAAUUAUAUCAGAAGGAgGAAGA..................... len:27 al:1
...............................................GgAAUAAUUAUAUCAGAAGGAAGAAGA..................... len:27 al:1
................................................UAAUAAUUAUAUCAGAAGGA........................... len:20 al:1
.................................................AAUAAUUAUAUCAGAAGGAAGAAGA..................... len:25 al:2
..................................................AUAAUUAUgUCAGAAGGAAGAAGAC.................... len:25 al:1
..................................................AUAAUUAcAUCAGAAGGAAGAA....................... len:22 al:1
..................................................AUAAUUAUAUCAGAAGGAgGAAG...................... len:23 al:2
..................................................AUAAUUAUAUCAGgAGGAAGAAG...................... len:23 al:1
..................................................AUAAUUAUAUCAGAAGGAAGAAGAaA................... len:26 al:9
..................................................AUAAUUAUAUCAGAAGGA........................... len:18 al:14
..................................................gUAAUUAUAUCAGAAGGAAGAAGA..................... len:24 al:16
..................................................AUAAUUAUAUCAGAAGGAAGAgGA..................... len:24 al:12
..................................................AUAAUUAUAUCAGAAGGAuGAAGA..................... len:24 al:2
..................................................AUAAcUAUAUCAGAAGGAAGAAGA..................... len:24 al:5
..................................................AUAAUUAUgUCAGAAGGAAGA........................ len:21 al:2
..................................................AUAgUUAUAUCAGAAGGAAGAAGA..................... len:24 al:5
..................................................AUAcUUAUAUCAGAAGGAAGA........................ len:21 al:1
..................................................AUAAUcAUAUCAGAAGGAAGAA....................... len:22 al:1
..................................................AUAAUUAUAUCAGAAGGAAaAAGA..................... len:24 al:1
..................................................AUAAUUAUAUCAGAAGGAAGAAa...................... len:23 al:13
..................................................AUAAUUAUAUCAGgAGGA........................... len:18 al:1
..................................................AUgAUUAUAUCAGAAGGAAGAAGA..................... len:24 al:14
..................................................AUAAUUAUAUCAGAAGGAcGAAGA..................... len:24 al:1
..................................................AUAAUcAUAUCAGAAGGAAGAAG...................... len:23 al:1
..................................................AUAAUUAUAUCAGAAGGAAGAAGgC.................... len:25 al:2
..................................................AUAAUUAUAUCAGAgGGAAGAAGA..................... len:24 al:8
..................................................AUAAUUAUAUCAaAAGGAAGAAGA..................... len:24 al:1
..................................................AUcAUUAUAUCAGAAGGAAGAAGA..................... len:24 al:2
..................................................AUAAUUAUAcCAGAAGGAAGAAG...................... len:23 al:1
..................................................AUAAUUAcAUCAGAAGGAAGA........................ len:21 al:3
..................................................AUAAUUAUAUCAGAAGGgAGAAGA..................... len:24 al:15
..................................................AUAAUUAUAUCgGAAGGAAGA........................ len:21 al:3
..................................................AUAAUUcUAUCAGAAGGAAGAAGA..................... len:24 al:2
..................................................AcAAUUAUAUCAGAAGGAAGAAGA..................... len:24 al:4
..................................................AUAAUUAUAUCAGAAGGAAGAAGc..................... len:24 al:12
..................................................AUAAUUAUAUCAGAAGGAAGAAGg..................... len:24 al:42
..................................................AUAAUUAUAcCAGAAGGAAGA........................ len:21 al:2
..................................................AUAAUUAUAUCAGAAGGgAGAA....................... len:22 al:1
..................................................AUAAUUAaAUCAGAAGGAAGAAG...................... len:23 al:1
..................................................AUAAUUAUcUCAGAAGGAAGAAGA..................... len:24 al:2
..................................................AUAAUUAUAUCAGAAGGAAGAAGACA................... len:26 al:7
..................................................AUAAaUAUAUCAGAAGGAAGAAGA..................... len:24 al:1
..................................................AUAAUUAUAUCAaAAGGAAGA........................ len:21 al:1
..................................................AUAAUUAUAcCAGAAGGAAGAAGA..................... len:24 al:4
..................................................AUAAUUAUAUCAGAAGG............................ len:17 al:2
..................................................AUAAUUAUAUCAGgAGGAAGAAGA..................... len:24 al:11
..................................................AUAAUUAUAUCAGAAGGAgGA........................ len:21 al:5
..................................................AUAAUUAUAUCAGAAGGuAGAAGA..................... len:24 al:2
..................................................AUAAUUAUAUCAGAAGGAAGu........................ len:21 al:6
..................................................AUAAUUAUAUCAGAgGGAAGAAG...................... len:23 al:1
..................................................AUAAUUAUAUCAGAAGGgAGAAG...................... len:23 al:3
..................................................AUAAUUAUAUCAGAAGGAAGAAGACg................... len:26 al:1
..................................................AUAAUUAUAUCAGAAGGAAGAAc...................... len:23 al:1
..................................................AUAAUUAUAUuAGAAGGAAGA........................ len:21 al:2
..................................................AUAAUUAUAUCAGAAGGAAGAAGA..................... len:24 al:3559
..................................................AUAAUUAcAUCAGAAGGAAGAAG...................... len:23 al:2
..................................................AUAAUUAUAUCAGAAGGAAGcAGA..................... len:24 al:2
..................................................AUAAUUAUAUCAGAcGGAAGAAGA..................... len:24 al:1
..................................................AUAAUUAUAUCAGAAGGAAGAAGAu.................... len:25 al:77
..................................................AUAAUUgUAUCAGAAGGAAGAAGA..................... len:24 al:5
..................................................AUAAcUAUAUCAGAAGGAAGAA....................... len:22 al:1
..................................................AUAAUUAUAUCAGAAGGAAGA........................ len:21 al:724
..................................................AUAAUUAUAUCgGAAGGAAGAAGA..................... len:24 al:11
..................................................AUAAUUAUAUCAGAAGGAAGAA....................... len:22 al:63
..................................................AUAAUUAUAUCAGcAGGAAGAAGA..................... len:24 al:3
..................................................AUAcUUAUAUCAGAAGGAAGAAGA..................... len:24 al:2
..................................................AUAAUUAUAUCcGAAGGAAGAAG...................... len:23 al:1
..................................................AUAAUUAUAUCAGAAGGAAGAAG...................... len:23 al:733
..................................................AUAAUUAUAUCAGAAGGAAGAAGu..................... len:24 al:108
..................................................AUAAUUAUAUCAGAgGGAAGA........................ len:21 al:2
..................................................AUAAUUAUAUCAGAAGGAAGAAGAC.................... len:25 al:11
..................................................AUAAUcAUAUCAGAAGGAAGAAGA..................... len:24 al:3
..................................................AUAAUUAUAUCAGAAGGAA.......................... len:19 al:5
..................................................AUAAUUAUAUCAGAAGGAAGAAGAa.................... len:25 al:245
..................................................AUAAUUAUAUCAGAAGGAAuAAGA..................... len:24 al:1
..................................................AUAcUUAUAUCAGAAGGAAGAAG...................... len:23 al:2
..................................................AUAAUUAUAUCAGAAGGAAGAAu...................... len:23 al:5
..................................................AUAAUUAUAUCAGAAGGAAGgAGA..................... len:24 al:18
..................................................AUAgUUAUAUCAGAAGGAAGAAG...................... len:23 al:1
..................................................AUAAUUAcAUCAGAAGGAAGAAGA..................... len:24 al:6
..................................................AUAAUUAUAUCAGAAGGAAGAAGACu................... len:26 al:27
..................................................AUAAUUAUAUCgGAAGGAAGAAG...................... len:23 al:3
..................................................AUAAUUAUAUCAGAAGGgAGA........................ len:21 al:1
..................................................AUAAUUAUAUCAGAAGGAAGAgG...................... len:23 al:6
..................................................AUAAUUAUgUCAGAAGGAAGAAGA..................... len:24 al:5
..................................................uUAAUUAUAUCAGAAGGAAGAAGA..................... len:24 al:2
..................................................AUAAUUAUAUCuGAAGGAAGAAGA..................... len:24 al:1
..................................................AUAAUUAUAaCAGAAGGAAGAAGA..................... len:24 al:1
..................................................AUAAUUAUAUCAGAAGGAAGg........................ len:21 al:7
..................................................AUAAUUAUAUCuGAAGGAAGA........................ len:21 al:1
..................................................AUAAUUAUAUCAGAAGGAgGAAGA..................... len:24 al:20
..................................................AUAAUUAUAUCAGAAGGAAGAAGuC.................... len:25 al:1
..................................................AUAgUUAUAUCAGAAGGAAGA........................ len:21 al:2
..................................................AUAAUUAUgUCAGAAGGAAGAAG...................... len:23 al:4
..................................................AUAAgUAUAUCAGAAGGAAGA........................ len:21 al:1
..................................................AUgAUUAUAUCAGAAGGA........................... len:18 al:1
..................................................AUAAUUAUAUCAGAAGGAAGgA....................... len:22 al:1
..................................................AUgAUUAUAUCAGAAGGAAGA........................ len:21 al:1
..................................................AUAAUUAUAUCAGAAaGAAGAAGA..................... len:24 al:1
..................................................AUAAUUAUAUCAGAAGGAAGAAGAg.................... len:25 al:3
..................................................AUAAUUAUAUCAGAAGGAAG......................... len:20 al:41
..................................................AUAAUUAUAUCAGAAaGAAGAAG...................... len:23 al:2
..................................................AUAAUUAUAUCAGAAGGAAGAAaA..................... len:24 al:1
..................................................AUAAUcAUAUCAGAAGGAAGA........................ len:21 al:1
..................................................AUAAUUAUAUCAGAAGaAAGAAGA..................... len:24 al:2
...................................................UAAUUAUAUCAGAAaGAAGAAGA..................... len:23 al:3
...................................................UAcUUAUAUCAGAAGGAAGAAGA..................... len:23 al:2
...................................................UAAUUAUAcCAGAAGGAAGA........................ len:20 al:2
...................................................UuAUUAUAUCAGAAGGAAGAAGA..................... len:23 al:3
...................................................UAAUUAUAUCAGAAGGgAGA........................ len:20 al:2
...................................................UAAUUAUAUCAGAAGGAAGg........................ len:20 al:6
...................................................UAAUUAUAUCAGAAGGAAGAcGA..................... len:23 al:2
...................................................UAAUcAUAUCAGAAGGAAGAAGA..................... len:23 al:11
...................................................UAAUUAUAUCgGAAGGAAGA........................ len:20 al:1
...................................................UAAUUAUAUCAGAgGGAAG......................... len:19 al:1
...................................................UAAUUAUAUuAGAAGGAAGAAGA..................... len:23 al:1
...................................................UAAUUAUAUCAGAAGGAAGAAGc..................... len:23 al:13
...................................................UAAUUAUAUCgGAAGGAAGAAGA..................... len:23 al:19
...................................................UAAUUAUAUCAGAAGGAAGAAGAu.................... len:24 al:69
...................................................UAAUUAUAUCAGAAaGAAGAAG...................... len:22 al:1
...................................................UAAUUAUAUCAGAAGGAAGAAGg..................... len:23 al:62
...................................................UAAUUAUgUCAGAAGGAAGAAGA..................... len:23 al:8
...................................................UAuUUAUAUCAGAAGGAAGAAGA..................... len:23 al:1
...................................................cAAUUAUAUCAGAAGGAAGAAGA..................... len:23 al:12
...................................................UAAUUAUAUCAGAAGGAAGcAGA..................... len:23 al:3
...................................................UAAUUAUAUCAGuAGGAAGAAGA..................... len:23 al:1
...................................................UAAUUAUAUCAGAAGGAAGAAGAuA................... len:25 al:2
...................................................UAAUUcUAUCAGAAGGAAGAAGA..................... len:23 al:2
...................................................UAAUUAUAUCAGAAGGAAGc........................ len:20 al:1
...................................................cAAUUAUAUCAGAAGGAAGA........................ len:20 al:2
...................................................UAAUUAUAUCAGAAGGAAGAg....................... len:21 al:3
...................................................UAAUUAUAUCAGAAGGAAGgAGACA................... len:25 al:1
...................................................UAAUUgUAUCAGAAGGAAGAAG...................... len:22 al:1
...................................................UAgUUAUAUCAGAAGGAAGAAGA..................... len:23 al:8
...................................................UAAUUAUAUCAGcAGGAAGAAGA..................... len:23 al:2
...................................................UAAUUAUAUCAGAAGGAAGAAGACg................... len:25 al:2
...................................................UAAcUAUAUCAGAAGGAAGAAGA..................... len:23 al:7
...................................................UAAUUAUcUCAGAAGGAAGAAG...................... len:22 al:1
...................................................UAAUUAUAUCAGAgGGAAGA........................ len:20 al:2
...................................................UAAUUAUAcCAGAAGGAAGAAGA..................... len:23 al:12
...................................................UAAUUgUAUCAGAAGGAAGAAGA..................... len:23 al:7
...................................................UAAUUAUAUCAGgAGGAAGAAG...................... len:22 al:2
...................................................UAAUUAUAUCAGAAGGAgGA........................ len:20 al:7
...................................................UAAUUAUAUCAGAAGGAAGAAGACA................... len:25 al:38
...................................................UAAUUAUAUCAGAAGGAuGAAGA..................... len:23 al:1
...................................................UAAUUAUAUCAGAAGGAgGAAG...................... len:22 al:4
...................................................UAAUUAUAUCAGAAGGAAGAAGACc................... len:25 al:10
...................................................UAAUUAUAUCAGAAGaAAGAAGA..................... len:23 al:1
...................................................UAAUaAUAUCAGAAGGAAGAAGA..................... len:23 al:1
...................................................cAAUUAUAUCAGAAGGAAGAAG...................... len:22 al:4
...................................................UAAUUAUAUCAGAAGGAAGAAGAa.................... len:24 al:220
...................................................UAAUUAUAUCAGAcGGAAGA........................ len:20 al:1
...................................................UAAUUAUAUCAGAAGGAA.......................... len:18 al:1
...................................................UAAUUAUAUCgGAAGGAAGAAG...................... len:22 al:2
...................................................UAAUUAUAUCAGAAGGAAcA........................ len:20 al:3
...................................................UAAUUAUAUCAGAAGGAAGu........................ len:20 al:11
...................................................UAAUUAUAUCAGAAaGAAGA........................ len:20 al:1
...................................................UAAUUAUAUCAGAAGGAAcAAGA..................... len:23 al:1
...................................................UAAUUAUAUCAGAAGGAAG......................... len:19 al:30
...................................................UAAUUAUAUCAGAAGGAAGAAaA..................... len:23 al:3
...................................................UAAUUAcAUCAGAAGGAAGAAGA..................... len:23 al:5
...................................................UAAUUAUAUCAGAgGGAAGAAG...................... len:22 al:4
...................................................UAAUUAUAUCAGAAGGuAGAAGA..................... len:23 al:2
...................................................UAAUUAUAUCAGAAGGAAGAgGA..................... len:23 al:33
...................................................UAAUUAUAUCAGAAGGAAGAAa...................... len:22 al:22
...................................................UAAUUAUAUCAGAAGGAAGAAGAC.................... len:24 al:36
...................................................aAAUUAUAUCAGAAGGAAGAAGA..................... len:23 al:15
...................................................UgAUUAUAUCAGAAGGAAGA........................ len:20 al:2
...................................................UAAUUAUAUCcGAAGGAAGAAGA..................... len:23 al:4
...................................................UAAUUAUAUCAGAAGGAAGAgG...................... len:22 al:2
...................................................UAAUUAUAUCAGAAGGAAGAAuA..................... len:23 al:3
...................................................UAAUUAUAUCAGAuGGAAGAAGA..................... len:23 al:2
...................................................UAAUcAUAUCAGAAGGAAGA........................ len:20 al:1
...................................................UAAUUAUAUCAGAAGGAAGA........................ len:20 al:981
...................................................UAAUUAUAUCAGAAGGAgGAAGA..................... len:23 al:18
...................................................UAAUUAUAUCAGAgGGAAGAAGA..................... len:23 al:15
...................................................UAAcUAUAUCAGAAGGAAGAAG...................... len:22 al:1
...................................................UgAUUAUAUCAGAAGGAAGAAGA..................... len:23 al:14
...................................................UcAUUAUAUCAGAAGGAAGAAGA..................... len:23 al:2
...................................................UAAUUAUAUCAGAAGGAAGAuGACA................... len:25 al:1
...................................................UAAUUAUgUCAGAAGGAAGA........................ len:20 al:1
...................................................UgAUUAUAUCAGAAGGAAGAAG...................... len:22 al:1
...................................................UAAUUAUAUCAGgAGGAAGA........................ len:20 al:2
...................................................UAAUUAUAgCAGAAGGAAGAAGA..................... len:23 al:2
...................................................UAAUUAUAUCAGAAGGgAGAAG...................... len:22 al:1
...................................................UAgUUAUAUCAGAAGGAAGAAG...................... len:22 al:2
...................................................UAAUUAUAcCAGAAGGAAGAAGAC.................... len:24 al:1
...................................................UAAUUAUAUCAGcAGGAAGA........................ len:20 al:1
...................................................UAAUUAUAUCAGAAGGAAGgAG...................... len:22 al:4
...................................................UgAUUAUAUCAGAAGGAAGAA....................... len:21 al:1
...................................................UAAUUAUAUCAGAAGGAAaAAGA..................... len:23 al:2
...................................................UAAUUgUAUCAGAAGGAAGA........................ len:20 al:3
...................................................UAAUUAUAUCAGAAGGAAGAAGA..................... len:23 al:4811
...................................................aAAUUAUAUCAGAAGGAAGAAG...................... len:22 al:1
...................................................UAAUUAUAUCAGAAGGA........................... len:17 al:7
...................................................UAAUUAUAUCAGgAGGAAGAAGA..................... len:23 al:16
...................................................UAAUUAUAUCAGAAGGAAGAA....................... len:21 al:59
...................................................UAAUUAUAUCAGAAGGAAGAu....................... len:21 al:2
...................................................UAAUUAUAUCAGAAGGAAGgAGA..................... len:23 al:16
...................................................UAAUUAUAUCAGAAGGAAGAAc...................... len:22 al:1
...................................................aAAUUAUAUCAGAAGGAAGA........................ len:20 al:2
...................................................UAAUUAUAUCAGAAGGAAGuAGA..................... len:23 al:3
...................................................UAAUUAUAUCAGAAGGAAa......................... len:19 al:3
...................................................UAAUUAUgUCAGAAGGAAGAAG...................... len:22 al:1
...................................................UAAUUAUAUCAGAAGGAAGAAGACu................... len:25 al:135
...................................................UAAUUAUAUCAGAAGGAAGAAGAg.................... len:24 al:4
...................................................UAAUUAUAUCAGAAGGAAGAAG...................... len:22 al:754
...................................................UAAUUAUAUCAGAAGGAAGAAu...................... len:22 al:73
...................................................UAAUUAUAUCAGAAGGAAGAAGAaA................... len:25 al:12
...................................................UAAUUAUcUCAGAAGGAAGAAGA..................... len:23 al:2
...................................................UAAUUAUAUCAGAAGGAAGAAGACAu.................. len:26 al:1
...................................................UAAUUAUAUCAGAAGGAAGAAGu..................... len:23 al:98
...................................................UAAUUAUAUCAGAAGGgAGAAGA..................... len:23 al:15
...................................................UAAUUgUAUCAGAAGGAAGAA....................... len:21 al:1
...................................................UAgUUAUAUCAGAAGGAAGA........................ len:20 al:1
...................................................UAAUUAUAcCAGAAGGAAGAAG...................... len:22 al:1
...................................................UAAUgAUAUCAGAAGGAAGAAGA..................... len:23 al:2
...................................................UAAUUAcAUCAGAAGGAAGAAG...................... len:22 al:1
....................................................AAUUAUAUCAGAAGGAAGAAGA..................... len:22 al:43
....................................................AAUUAUAUCAGAAGGAAGAAGACA................... len:24 al:1
....................................................AAUUAUAcCAGAAGGAAGAAGA..................... len:22 al:1
....................................................AAUUAUAUCAGAAGGgAGAAGA..................... len:22 al:1
....................................................AAUUAUAUCAGAAGGAAGAAGACu................... len:24 al:1
....................................................AAUUAUAUCAGAAGGAAGAAGAa.................... len:23 al:4
....................................................AAUUAUAUCAGAAGGAAGAAGu..................... len:22 al:2
....................................................AAUUAUAUCAGAAGGAAGA........................ len:19 al:7
....................................................cAUUAUAUCAGAAGGAAGAAGA..................... len:22 al:1
....................................................AAUUAUAUCAGAAGGAAGAAG...................... len:21 al:9
....................................................AAUUAUAUCAGAAGGAuGAAGA..................... len:22 al:1
....................................................AAUUAUAUCgGAAGGAAGAAGA..................... len:22 al:1
....................................................AAUUAUAUCAGAAGGAAGu........................ len:19 al:1
....................................................AAUUAUAUCAGAAGGAAGAAGAC.................... len:23 al:1
.....................................................AUUAUAUCAGAAGGAAGAAGAa.................... len:22 al:1
.....................................................AUUAUAUCAGAAGGAAGAAGu..................... len:21 al:3
.....................................................AUUAUAUCAGAAGGAAGAA....................... len:19 al:2
.....................................................AUUAUAUCAGAAGGAAGAAGA..................... len:21 al:23
.....................................................AUUAUAUCAGAAGGAAGA........................ len:18 al:14
.....................................................AUUAUAUCAGAAGGAAGAgG...................... len:20 al:1
.....................................................AUUAUAUCAGAAGGgAGAAGA..................... len:21 al:1
.....................................................AUUAUAUCAGAAGGgAGAAG...................... len:20 al:2
.....................................................AUUAUAUCAGAAGGAAGAAG...................... len:20 al:3
......................................................UUAUAUCAGAAGGAAGAAGACu................... len:22 al:4
......................................................UUAUAUCAGAAGGAAGAAGAC.................... len:21 al:1
......................................................UUAUAUCAGAAGGAAGAAGAu.................... len:21 al:1
......................................................UUAUAUCAGAAGGAAGAAGu..................... len:20 al:1
......................................................UUAUAUCAGAAGGAAGAAG...................... len:19 al:9
......................................................UUAUAUCAGAAGGAAGAgGA..................... len:20 al:1
......................................................UUAUAUCAGAAGGAAGAAGA..................... len:20 al:13
.......................................................UAUAUCAGAAGGAAGAAGu..................... len:19 al:4
.......................................................UAUAUCAGAAGGAAGAAG...................... len:18 al:1
.......................................................UAUAUCAGAAGGAAGAAGACu................... len:21 al:10
.......................................................UAUAUCAGAAGGAAGAAGA..................... len:19 al:11
.......................................................UAUAUCAGAAGGAAGAAGAa.................... len:20 al:4
........................................................AUAUCAGAAGGAAGAAGACu................... len:20 al:2
........................................................AUAUCAGAAGGAAGAAGACA................... len:20 al:1
..........................................................................CAAAGAAAGAGACAAGAAUCc len:21 al:1
............................................................................AAGAAAGAGAgAAGAAUC. len:18 al:1