Genome: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/E-Peve/data/Porites_evermanni_v1.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/E-Peve/output/08-Peve-sRNA-discovery-ShortStack/ShortStack_out/merged_alignments.bam
Location: Porites_evermani_scaffold_1283:8559-8652 plus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/E-Peve/output/08-Peve-sRNA-discovery-ShortStack/ShortStack_out/strucVis/Cluster_9535.ps.pdf
Locus Name: Cluster_9535
ACAGACUAGCCUCCCACGUAGGCGUUUUUAGGGGAGCUCGUUUUUCAUCAAACGAGCUCCCUUAAAAACGACGGCGUGGGAGGCUACGAACAGA
......(((((((((((((...(((((((((((((((((((((......)))))))))))))))))))))...)))))))))))))........ (-61.80)
....................GGCGUUUUUAGGGGAGCUCGUU.................................................... len:22 al:1
...........................UUAGGGGAGCUCGUUUUUCAUCAAACG........................................ len:27 al:1
...................................................ACGAGCUCCCUUAAAAACGACGGa................... len:24 al:1
...................................................ACGAGCUCCCUUAAAAACGACG..................... len:22 al:1
...................................................gCGAGCUCCCUUAAAAACGACGG.................... len:23 al:1
...................................................ACGAGCUCCCUUAAAAACGACGa.................... len:23 al:4
...................................................ACGAGCUCCCUUAAAAACGACGG.................... len:23 al:44
...................................................ACGAGCUCCCUUAAAAACGACu..................... len:22 al:1
...................................................ACGAGCUCCCUUAAAAACGACGGC................... len:24 al:1
...................................................ACGAGCUCCCUUAAAAACGACGu.................... len:23 al:3
...................................................ACGAGCUCCCUUAAAAACGA....................... len:20 al:4
...................................................ACGAGCUCCCUUAAAAACGACGc.................... len:23 al:1
....................................................aGAGCUCCCUUAAAAACGACGG.................... len:22 al:2
....................................................CGAGCUCCCUUAAAAACGACGc.................... len:22 al:9
....................................................CGAGCUCCCUUAAAAACGACGGa................... len:23 al:8
....................................................CaAGCUCCCUUAAAAACGACGG.................... len:22 al:2
....................................................CGAGCUCCCUUAAAAACGACGGC................... len:23 al:11
....................................................CGAGCUCCCUUAAAAACGACuG.................... len:22 al:1
....................................................CGAGCUCCCUUAAAAACGACGGCu.................. len:24 al:1
....................................................CGAGCUCCCUUAAAAACGACuGC................... len:23 al:1
....................................................CGAGCUCCCUUAAAAACGgCGG.................... len:22 al:1
....................................................CGAGCUCCCUUAAAAACGACGa.................... len:22 al:47
....................................................uGAGCUCCCUUAAAAACGACGG.................... len:22 al:2
....................................................CGAGCUCCCUUAAAAACGACGu.................... len:22 al:58
....................................................CGAGCUCCCUUAAAAACGACGGCa.................. len:24 al:2
....................................................CGAGCUCCCUUAAAAgCGA....................... len:19 al:1
....................................................CGAGCUCCCUUAAAAACGAaGG.................... len:22 al:1
....................................................CGAGCUCCCUUAAAAACGA....................... len:19 al:9
....................................................CGAGCcCCCUUAAAAACGAC...................... len:20 al:1
....................................................CGAGCUCCCUUAAAAACGACGG.................... len:22 al:274
....................................................CGAGCUCCCUUAAAAACGACu..................... len:21 al:1
....................................................CGAaCUCCCUUAAAAACGACGG.................... len:22 al:1
....................................................CGAGCUCCCUUAAAAACGAu...................... len:20 al:1
....................................................CGAGCUCCCUUAAAAgCGACGG.................... len:22 al:2
....................................................CGAGCcCCCUUAAAAACGACGG.................... len:22 al:2
....................................................CGAGCUCCCUUAAAAACGACc..................... len:21 al:1
....................................................CGgGCUCCCUUAAAAACGACGG.................... len:22 al:2
....................................................CGAGCUCCCUUAAAAACGACGGu................... len:23 al:39
....................................................CGAGCUCCCUUAAAAACGAuGG.................... len:22 al:1
....................................................CGAGCUCCCUUAAAAACGACa..................... len:21 al:1
....................................................CGAGCUCCCUUAAAAgCGACGGC................... len:23 al:1
....................................................CGAGCUCCCUUAAAAACGACG..................... len:21 al:8
....................................................CGAGCUCCCUUAAAAACGAC...................... len:20 al:4
.....................................................GAGCUCCCUUAAAAACGACGGCa.................. len:23 al:1
.....................................................GAGCUCCCUUAAAAACGACGG.................... len:21 al:1