Genome: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/E-Peve/data/Porites_evermanni_v1.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/E-Peve/output/08-Peve-sRNA-discovery-ShortStack/ShortStack_out/merged_alignments.bam
Location: Porites_evermani_scaffold_866:22803-22895 minus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/E-Peve/output/08-Peve-sRNA-discovery-ShortStack/ShortStack_out/strucVis/Cluster_7882.ps.pdf
Locus Name: Cluster_7882
AAUUUAGCAAUUUGUGGUUUUAUUUCAAACGUCGCGUAACCUUUUUAAGGGUUGCAUGACCUGUGAAAGAAAAAUUACGAAUUCAAUACUCUG
........(((((((((((((.(((((...((((.((((((((....)))))))).))))...)))))..))))))))))))).......... (-28.00)
...................UUAUUUCAAACGUCGCGUAACCU................................................... len:23 al:1
....................UAUUUCAAACGUCGCGUAACCUc.................................................. len:23 al:2
....................UAUUUCAAACGUCGCGc........................................................ len:17 al:1
....................UAUUUCAAACGUCGCGUAACCa................................................... len:22 al:70
....................UAUUUCAAACGUCGCGUA....................................................... len:18 al:13
....................UAUUUCAAACGUCGCGUAu...................................................... len:19 al:6
....................UAUUUCAAuCGUCGCGUAACCU................................................... len:22 al:2
....................UAUUUCAAACGUCGCGUAACCgU.................................................. len:23 al:1
....................UAUUUCAgACGUCGCGUAACCU................................................... len:22 al:3
....................UAUUUCAAACGUCGCGUAAuCU................................................... len:22 al:7
....................UAUUUCAAACGUCGCGUAACuU................................................... len:22 al:2
....................UAUUUCgAACGUCGCGUAAC..................................................... len:20 al:1
....................UAUUUCAAACaUCGCGUAACCUUU................................................. len:24 al:1
....................UAUUUCAAACGUCGuGUAACCU................................................... len:22 al:4
....................UAUUUCAAACGUCGCGUAACCUa.................................................. len:23 al:8
....................cAUUUCAAACGUCGCGUAACCU................................................... len:22 al:6
....................UAUUUCAAACGUCGCGcAAC..................................................... len:20 al:1
....................UAUUUCAAACGUCGCGUAACCUgU................................................. len:24 al:1
....................UAgUUCAAACGUCGCGUAACCU................................................... len:22 al:1
....................UAUUUCAAACGUCGCGUAACCUU.................................................. len:23 al:74
....................UAUUUCAAACGUCGCGUAuCCU................................................... len:22 al:2
....................UAUUUCAAACGUCGCGUAACCUUUa................................................ len:25 al:2
....................UAUUUCAAACGUCGCGUAACCg................................................... len:22 al:27
....................UAUUUCAAACGUCGCGUAACCUaU................................................. len:24 al:3
....................UAUUUCgAACGUCGCGUAACCU................................................... len:22 al:9
....................UAUUUCAAACGUCGCGUAACCUaUU................................................ len:25 al:5
....................UAUUUCAAACGUCGCGUAACCUUgU................................................ len:25 al:2
....................UAUUUCAAACGUCGCGUAACCc................................................... len:22 al:255
....................UAUUUCAAACGUuGCGUAACCU................................................... len:22 al:2
....................UAUUUCAAACGUCGCGUAACCUUUUUu.............................................. len:27 al:2
....................UAUUUCAAAuGUCGCGUAACCU................................................... len:22 al:4
....................UAUUUCAAACGUCGCGUAAu..................................................... len:20 al:16
....................UAUUUCAAACGUCGCGUAACa.................................................... len:21 al:21
....................UAUUUCAAACGUCGCGUAACCU................................................... len:22 al:1769
....................UAUUcCAAACGUCGCGUAA...................................................... len:19 al:2
....................UAcUUCAAACGUCGCGUAACCU................................................... len:22 al:9
....................UAUUUCAAACGUCGCGUAACCUUUU................................................ len:25 al:38
....................UAUUUCAgACGUCGCGUAAC..................................................... len:20 al:1
....................UAUUUCAgACGUCGCGUAACC.................................................... len:21 al:1
....................UAUUUCAAACGUCGCaUAACCU................................................... len:22 al:1
....................UAUUaCAAACGUCGCGUAACCU................................................... len:22 al:1
....................UAUaUCAAACGUCGCGUAACCUUUU................................................ len:25 al:1
....................UAUUUCAAACGUCGCGcAACCU................................................... len:22 al:3
....................aAUUUCAAACGUCGCGUAACCU................................................... len:22 al:3
....................UAUUcCAAACGUCGCGUAACC.................................................... len:21 al:3
....................UAUUUCAAACGUCGCGUAACu.................................................... len:21 al:31
....................UAUcUCAAACGUCGCGUAACCU................................................... len:22 al:3
....................UAUUUCAAACGUCGCGUAA...................................................... len:19 al:7
....................UAUUUCAAACGUCGCGUAACCUUUaU............................................... len:26 al:2
....................UAUUUCAAACGUCGCGUAACCUUUUU............................................... len:26 al:4
....................UAUUUCAAACGUCGCGUAAa..................................................... len:20 al:3
....................UgUUUCAAACGUCGCGUAACCU................................................... len:22 al:1
....................UAUUUCAAACGUCGCG......................................................... len:16 al:2
....................UAUUUCAAACGUCGCGUAgCCU................................................... len:22 al:12
....................UAUUUCAAACGUCGCGUAACC.................................................... len:21 al:117
....................cAUUUCAAACGUCGCGUAACCUU.................................................. len:23 al:1
....................UAUUUCAAACGUCGuGUAACCUU.................................................. len:23 al:2
....................UAUUUCgAACGUCGCGUAACCUUUU................................................ len:25 al:1
....................UAUUUCAAACGUCGCGUAACCUUU................................................. len:24 al:78
....................UAUUUCAAACGUCaCGUAACCU................................................... len:22 al:2
....................UAUUcCAAACGUCGCGUAACCU................................................... len:22 al:5
....................UAUUUCAAACGUCGCGUAAC..................................................... len:20 al:48
....................UAUUUCAAACGUCGCGUAACCUUUUc............................................... len:26 al:2
....................UAUUUCAAACGcCGCGUAACCUUUU................................................ len:25 al:1
....................UAUcUCAAACGUCGCGUAACC.................................................... len:21 al:1
....................UAUUUCAAACGUCGCGUAACCUUc................................................. len:24 al:5
....................UAaUUCAAACGUCGCGUAACCU................................................... len:22 al:1
....................UAUUcCAAACGUCGCGUAACCUU.................................................. len:23 al:1
....................UAUUUCAAACGUCGuGUAACC.................................................... len:21 al:2
....................UAUUUCAAACGcCGCGUAACCU................................................... len:22 al:10
....................UAUUUCuAACGUCGCGUAACCU................................................... len:22 al:1
....................UAUUUCAAACGUCGCGUgACCU................................................... len:22 al:5
....................UAUUUCAAACGUCGCGUAgCC.................................................... len:21 al:2
....................UAUUUCAAgCGUCGCGUAACCU................................................... len:22 al:5
....................UAUUUCcAACGUCGCGUAACCU................................................... len:22 al:1
....................aAUUUCAAACGUCGCGUAACCUU.................................................. len:23 al:1
....................UAUUcCAAACGUCGCGUAAC..................................................... len:20 al:1
....................UAUUUCAAACGUCGCGUAACCUUUUUAAG............................................ len:29 al:1
....................UAUUUCAAACGUCGCGUAACCUUa................................................. len:24 al:2
....................aAUUUCAAACGUCGCGUAAC..................................................... len:20 al:1
.....................AUgUCAAACGUCGCGUA....................................................... len:17 al:1
.....................AUUUCAAACGUCGCGUAACCUUUU................................................ len:24 al:1
.....................AUUUCAAACGUCGCGUAACCU................................................... len:21 al:5
......................UUUCAAACGUCGCGUAACCUUUUUAAGGGUU........................................ len:31 al:1
......................UUUCAAACGUCGCGUAACCUUUUUAA............................................. len:26 al:1
......................UUUCAAACGUCGCGUAACCa................................................... len:20 al:1
......................UUUCAAACGUCGCGUAACCUU.................................................. len:21 al:1
......................UUUCAAACGUCGCGUAACCUUU................................................. len:22 al:1
......................UUUCAAACGUCGCGUAACCU................................................... len:20 al:9
......................UUUCAAACGUCGCGUAACa.................................................... len:19 al:1
........................UCAAACGUCGCGUAACCUUUU................................................ len:21 al:7
..........................AAACGUCGCGUAACCUUUU................................................ len:19 al:1
..........................AAACGUCGCGUAACCUUUUU............................................... len:20 al:1
........................................CUUUUUAAGGGUUGCAUGACgUGU............................. len:24 al:1
........................................CUUUUUAAGGGUUGCAUGACgUGUGAAAG........................ len:29 al:1
..........................................UUUUAAGGGUUGCAUGACgUGUGA........................... len:24 al:1
..........................................UUUUAAGGGUUGCAUGACgUGUGAAAGAA...................... len:29 al:1
..........................................UUUUAAGGGUUGCAUGACgUGUGAAAGAAAA.................... len:31 al:15
..........................................UUUUAAGGGUUGCAUGACgUGUGAAAGA....................... len:28 al:1
...........................................UUUAAGGGUUGCAUGACgUGU............................. len:21 al:2
...........................................UUUAAGGGUUGCAUGACgUGUGAAAGAAA..................... len:29 al:4
...........................................UUUAAGGGUUGCAUGACgUGUGAAAGA....................... len:27 al:1
...........................................UUUAAGGGUUGCAUGACgUGUGAAAGAAAA.................... len:30 al:1
..............................................AAGGGUUGCAUGACgUGUGAAAGAAAA.................... len:27 al:2
..............................................AAGGGUUGCAUGACgUGU............................. len:18 al:10
...............................................AGGGUUGCAUGACgUGUGAAAG........................ len:22 al:1
...............................................AGGGUUGCAUGACgUGUG............................ len:18 al:1
...............................................AGGGUUGCAUGACgUGUGAAAGAAAA.................... len:26 al:2
...............................................AGGGUUGCAUGACgUGUGAAAGAAA..................... len:25 al:1
.................................................GGUUGCAUGACgUGUGAAAGAAAAAUUAC............... len:29 al:1
.................................................GGUUGCAUGACgUGUGAAAGAAAAAUU................. len:27 al:1
.................................................GGUUGCAUGACgUGUGAAAGAAAAAUUACGA............. len:31 al:1
..................................................GUUGCAUGACgUGUGAAAGAA...................... len:21 al:54
..................................................GUUGCAUGACgUGUGAAAGAAAAA................... len:24 al:7
..................................................GUUGCAUGACgUGUGAAAGAAAA.................... len:23 al:184
..................................................GUUGCAUGACgUGUGAAAGAAAAAU.................. len:25 al:7
..................................................GUUGCAUGACgUGUGAAAGAAA..................... len:22 al:235
..................................................GUUGCAUGACaUGUGAAAGAA...................... len:21 al:1
..................................................GUUGCAUGACgUGUGAAAGA....................... len:20 al:25
..................................................GUUGCAUGACgUGUGAAAG........................ len:19 al:8
...................................................UUGCAUGACgUGUGAAAGAA...................... len:20 al:2
...................................................UUGCAUGACgUGUGAAAGAAAAA................... len:23 al:2
...................................................UUGCAUGACgUGUGAAAGAAAA.................... len:22 al:3
...................................................UUGCAUGACgUGUGAAAG........................ len:18 al:1
...................................................UUGCAUGACgUGUGAAAGAAAAAUUAC............... len:27 al:1
...................................................UUGCAUGACgUGUGAAAGAAA..................... len:21 al:5
....................................................UGCAUGACgUGUGAAAGA....................... len:18 al:1
.....................................................GCAUGACgUGUGAAAGAAA..................... len:19 al:1
.....................................................GCAUGACgUGUGAAAGAAAAAUUACGAAUU.......... len:30 al:6
......................................................CAUGACCUGUGAAAGAAAAAUUACGAAUU.......... len:29 al:1
......................................................CAUGACgUGUGAAAGAAAAAUUACGAAUUC......... len:30 al:4
.......................................................AUGACgUGUGAAAGAAAAAUUACGAAUUC......... len:29 al:1
.........................................................GACgUGUGAAAGAAAAAU.................. len:18 al:1